Os01g0551100

From RiceWiki
Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0551100| Description = Ribonuclease III domain containing protein| Version = NM_001049841.1 GI:115437481 GeneID:4325844| Length = 5454 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0551100

Description

Ribonuclease III domain containing protein

Version

NM_001049841.1 GI:115437481 GeneID:4325844

Length

5454 bp

Definition

Oryza sativa Japonica Group Os01g0551100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22322395..22327848

Sequence Coding Region

22323586..22323828,22323915..22324055,22327375..22327761

Expression

GEO Profiles:Os01g0551100

Genome Context

<gbrowseImage1> name=NC_008394:22322395..22327848 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22322395..22327848 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagcagcagcatccggcgccgggcgcggagttcgtggcggaccgggacgcggcgcgggcggaggtggagcgtgcactgggcgggtacagcttccgcgacggcggcgcgctgctgctggaggacgccctgacgcacagcgtgcaccccagggacgaggccggcgggcgggccaggcaccagcggctcgagttcctcggcgacgctgcgctcggcctcgccttcgccaccatcttctaccgggacgacccgggcctcgaccagggggacctcacggtgctccgctccgccaacgtctccacccagaagctcgcccgcgtcgccgtccgccggcgcctctatccgctgctccggcgctacaactgcgcccctcaagaccacgaagtcagccgttttaccaagtcagttgaaggcccatatagtggtgaccccattgagggtccaagggtgcttgctgatattgttgaggccattgttggtgccgtctatcttgattccaagcttgatcttgaagtactccagaaggttgcgaagttgctgtgtgagccaattatcaccaaaaaggcattactagaagatcctgagtccatgttgaatgagctagggggagaacatagggaagatttggaaatcaaaatattggcgtggaggaaggtggcaaacgtagtcgatgatggccgggagcaagcgatcacaactagtggacttggcaacggctcagaggatgaggttggaaagcttagaacaataagaatagaagaagcttaa</cdnaseq>

Protein Sequence

<aaseq>MQQQQHPAPGAEFVADRDAARAEVERALGGYSFRDGGALLLEDA LTHSVHPRDEAGGRARHQRLEFLGDAALGLAFATIFYRDDPGLDQGDLTVLRSANVST QKLARVAVRRRLYPLLRRYNCAPQDHEVSRFTKSVEGPYSGDPIEGPRVLADIVEAIV GAVYLDSKLDLEVLQKVAKLLCEPIITKKALLEDPESMLNELGGEHREDLEIKILAWR KVANVVDDGREQAITTSGLGNGSEDEVGKLRTIRIEEA</aaseq>

Gene Sequence

<dnaseqindica>4021..4263#3794..3934#88..474#ggtcgaaagctctaactctagctttgatccatgcatatctatccatcctttctttgatcggtcgcaacgcccagaaactgatcgacgatgcagcagcagcagcatccggcgccgggcgcggagttcgtggcggaccgggacgcggcgcgggcggaggtggagcgtgcactgggcgggtacagcttccgcgacggcggcgcgctgctgctggaggacgccctgacgcacagcgtgcaccccagggacgaggccggcgggcgggccaggcaccagcggctcgagttcctcggcgacgctgcgctcggcctcgccttcgccaccatcttctaccgggacgacccgggcctcgaccagggggacctcacggtgctccgctccgccaacgtctccacccagaagctcgcccgcgtcgccgtccgccggcgcctctatccgctgctccggcgctacaactgcgcccctcaagaccacgaagtacgcacgaacctctcctctgctttcctctgtactctctctctctcgcggatccatactttgctagtatcgattaattaaagtataaaaaaatataggactacctattatatactaaaattttactgtattaaacttactacaaacgcttccaagatatcatgtgacactctacaaatacttctaaatcaccacatggcactccaatatattgaagaaaatcctataaattatgattaaaaaaatacaactaactattgattttcttttaaatagatggacccaatgattttaaccattaaatccggtatcacacccgcacggcggttgtgccaatgaccaaacggcccggccctgggccaaggtcagtcgggtcatcacggcccgacctacacatcgggccgtcccgtgccagccaatgggctatactcacggcccaagcacggcccaatatgactcgggccgtgccaggccagcccgaaggcacgacagtccatcgtgcttaataagtctattttctctctcaactctttgggctgtgttatatatggccgaagtaagtctgttttgtattcctcttctctttggaccatgtcttatatggctgattaagtctattttggatatttctactatttttcttcttcgaccgtgcagtaccgggccagcccaccatgcaaaggcatcggccaggcacggcccaactgtcgggccatgtagtgcttgggccgggccgttgggcctcaggccttatggccatcaatagatgtgcgtagtacatactctgtactccctccaccgtccgtaatctctcatattttctaactaacttctcatattttctagctaattaacacttaatatatatatctctactattataaaaattgaaaatgtttttgccaatactctgtacgtcatccgtgtttgtaatacagccgccagcaaaaatggatctttgctggcggctggcttaagacgactgccagcgaggatattgatattcactgccctttgttttgtggcggctccaaattccgctagcgaaaacctaaaatagccgccacgaaagatggttttcgtaggagaactaggacttcacgtcatgtgagaatattgaagcaagtcaatgtaaggggcctaatgggttctgtacctacgaggagcttaagtgggcacatgagtgtgggtctcaagaagcatgtcaatgctcgaaccagggtttcacggtgcatgatcatgtttgattttaacagtattatcctgctaagaggcaggagtggtatttttacaatacttctacacagatttagacaaaatgatacatgaaaacatattgccaagtttggagcaaagatgatttttttaatacattatcttgtattaggtttatttcggtggtataactgcaatttcctctatgaaaaggtgcctaactttcaagataataataataataataataataataataataataataataataataataataataataataataataataataataataataagtactccatttgtcaaaataaatataaggcaccgtacttttagcaaaatcggcattcataagttttgactaatgactaaactaatatatatgtttagtatcatgtattccatattattatgtttatatctgaaagcacttttatgtgatgtgaaattcactttttctatagcatattataaaaaataagtcaactataatgttaaagacattgaaaagctaatacacgttatattttgagggaagtagggaacagtactggtagtgatttatgactgaatccaataggcatttttatcgttcggaagatttaagtcctttctctttttccaacacttatagcaaggcaattttgtaggtgtttttgtcgttcggaacattcaactatgttctcttttctttcttgtcaactccgttctcttttctttcctccacttatagcaagataatttgtaatgaaagtccatgagctattttacagggttataataagaaaatagataagaggcacgtgcatatgcgctggcttcttcctagttgtttataaaatgtgcatgttatctatcttttctttttctatggataatattcacttttatttaattttatatgtggatataattgtattttattattaagttcatttgcaaaatttacgatgtgataagttgggatggtagattcacactgttatcatcgttagagcctttaacgacacatcgggatgtaagatttaggttttctcttcataatcttaaatttcatatatacattcaaaaccttccccatgaataccctgaaattaagaaagctttaatgacctgtttggttggagggtgtttgtgatgggaatgggagtttatgatatctagaaatttaagtctgtagtttggttgaaagacttaggaattacagggggtttgggatggggaattaagaggtccaattcccaccaatctcttacctgggggaggcctgttaattcgtgagacttggagagaattcgatgtgaaaccaaacaacggatgaggactaaaaatgtaactcccataaccaatcccaccatcaactccctccttaagactctcattcctcgtcccttctcttgccaaacaaatcgtaattggatactcatattgtgtgctaagcatttgatatgcttaaataaacattaatcataagctcaaaataatatgttgtagatcgatccataattttatttggccagttaacaactctttgcatgagatgcaaactcgctccgatcaataatattcgactttgggatgtaactaaacttagcaactcaaaggagtagtactatatacaaaggtgaactaaggtattattatggaacaactgaataccgaccaccttcgtttaccgctaaaaaaatgttttaatttacaggcggtggaaagccattttcgcacgcgtttagccaccgcctgaaaaagaattttacccaagtcatctattttacctaagtgtagcagactagcacaatcccacctcacactcatagctgatagctggagtatcaaacaatttattattttttcagctaaatatatattcaaacgaatatttgggtatgatctcaaatgagaaataataaaaaaatttcaaccacaaagtccataaagttgtaagtgaaaactatttatttttttaaatatggttgttttataaaacaaaacccaatcggggacagattcagaccaaccgtaccgtgcactttgatgattggtatgccgtatgctcttactgactatagcatttgtgatgcaggtcagccgttttaccaagtcagttgaaggcccatatagtggtgaccccattgagggtccaagggtgcttgctgatattgttgaggccattgttggtgccgtctatcttgattccaagcttgatcttgaagtactccagaaggttaattttcagccttctttcatattgtatgtttgcttttattaatgtagatatggttcctatatattgagtgatgtatggtgtaggttgcgaagttgctgtgtgagccaattatcaccaaaaaggcattactagaagatcctgagtccatgttgaatgagctagggggagaacatagggaagatttggaaatcaaaatattggcgtggaggaaggtggcaaacgtagtcgatgatggccgggagcaagcgatcacaactagtggacttggcaacggctcagaggatgaggttggaaagcttagaacaataagaatagaagaagcttaacgagcagcacagcaagttacagtaaattggcgaccaggaaccaatcagtaagtacgattactattatctcctcgagtcaagttttgtttttcatcccaacaccttgggaacttgaaatttcattcctccaaagtcagggttaagagctaaatgaattataaaattaggaacacaggaattatagaaacacagaatggcatatgtgtaaaattaggatataatggcaaaaaagaggaatagaaaatataggaaacgcatgtttggaacatagaaaagaaaaatcaaggatgggaagtaggcccacctgtcaatcacttgcaaatcttgtcaaccactatataatgaaaatggagaggattgatatttcaactaagcaattggaattttgaaaaattgcacaactacttactttagtgattcccaagtccacaacaatggagattaattttccgaatcttcttattcattgttaaaccttacattcaggcattttgtaaaatttcactatgtcgacctagctatattcaaccatatgtaatgtaggtctgctagagcggagtgaacgttcaaccaattgcttaagatacacttaacacaccatgtaaaatttcactatgtcgacctacattcaaccattgttaaaccttttggatggttcagatagctgcttgattcggtaaatacaaattttgagtcgatgtcttagttttccctgttcttcttttcctgctgcatgaggtttctttgtgccacgtgaggcatcatcctatcgcgcaactaaaatttttctaactacaggtgaactagcagcccatatatagtggctggatctgaacttttgtgggtcaggtatggaacatattcatgtattgcgcaggcacttctatgctatgctagctctgaacattgatgcctggaggtttgtttcatggcatgttcactgctagatagtagtagctgtgaaatcaatgtatggctattgaaattgatgcagacctggtactattgatgtctggtaccctggttatcaggccaagcgtgtcctaatcttgtcgagcgatgaacactatagtgtattttgtcttatgtacaatggaggtttgtcatactgaatctgtgtttgtactcaaccaatgtatatgtagaataccatgtaaagtaatattattaaagaatgtgtgatgtttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0551100, RefSeq:Os01g0551100