Os01g0552300

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0552300| Description = Similar to Protein phosphatase-2C| Version = NM_001049846.1 GI:115437501 GeneID:4325851| Length = 3774 bp| Definiti...")
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Gene Name

Os01g0552300

Description

Similar to Protein phosphatase-2C

Version

NM_001049846.1 GI:115437501 GeneID:4325851

Length

3774 bp

Definition

Oryza sativa Japonica Group Os01g0552300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22395499..22399272

Sequence Coding Region

22395502..22395809,22395892..22396023,22396483..22396585,22396749..22396862,22397352..22397431
,22397541..22397594,22398115..22398231,22398355..22398409,22398503..22398535
,22398671..22398717,22398956..22399082

Expression

GEO Profiles:Os01g0552300

Genome Context

<gbrowseImage1> name=NC_008394:22395499..22399272 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22395499..22399272 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgctgagcccgcgtgtgccgcggctgccgctcgcctccgcctccgccgctggagcggggctccggtgctgcgtcagcggcggcagggccgggtcggcggcgtggtgccacgcgtcggcggccggcagcgtggcgtcgtcgtcgtcggagctggaggccatccggtgggggaccgccaagctgcagggcgcgcgcgacgagatggaggacgaggtcgtcctccgccccggctccctcctcgacggcttctccttcgccgccgtcttcgacggccacgccggattctccgccgtcgagttcctcagggacgagctgtacaaggaatgcgcggcggcgttggacggcggcgcggtgctgagcaccaagaacctcgacgccatcaccgactcgatccagcgcgccttcgccaccgtcgacgccaacctctccacctggctcgagcagatggacaaggaagatgagtccggcgccacggccacggccatgttcctcaggaacgatgtccttgttgtctcgcacattggcgactcctgcttgcaggtcgtatcacgcggtgggaggcctcaagctgtgaccaacttccaccgaccgtacgggaacaagaaagcgtctcttgaagaggtgaagcggatcagagcagcaggtggatggattgttgatggacgcatatgtggagaaatttctgtgtctcgtgcttttggagacattagatttaagacacggaagaatgagatgttggtaaaaggagttaaagaagggagatggactgaaaagtttatctcacgaataaattttaaaggagatttaatagtctcttcacctgacgtatccctggtcgaacttggaccagatgtggaatttgttttgctagcaacagatggtctttgggattacattaaaagctctgaagcagtagcattagttagggatcaactacggcaacatggggatgtccaggttgcctgtgaggcacttggtcagatagctctggatcgtcggtcgcaagacaacattagtatagtcatagctgacttggggaggacaaactggaaggagctgcctgctcaaaggccaaatttattcttggagttaactcaagcagttgcaacagttggggccgtctcattagggatttatatttcatcgctccttgcgttgcagtag</cdnaseq>

Protein Sequence

<aaseq>MALLSPRVPRLPLASASAAGAGLRCCVSGGRAGSAAWCHASAAG SVASSSSELEAIRWGTAKLQGARDEMEDEVVLRPGSLLDGFSFAAVFDGHAGFSAVEF LRDELYKECAAALDGGAVLSTKNLDAITDSIQRAFATVDANLSTWLEQMDKEDESGAT ATAMFLRNDVLVVSHIGDSCLQVVSRGGRPQAVTNFHRPYGNKKASLEEVKRIRAAGG WIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSP DVSLVELGPDVEFVLLATDGLWDYIKSSEAVALVRDQLRQHGDVQVACEALGQIALDR RSQDNISIVIADLGRTNWKELPAQRPNLFLELTQAVATVGAVSLGIYISSLLALQ</aaseq>

Gene Sequence

<dnaseqindica>4..311#394..525#985..1087#1251..1364#1854..1933#2043..2096#2617..2733#2857..2911#3005..3037#3173..3219#3458..3584#atcatggcgctgctgagcccgcgtgtgccgcggctgccgctcgcctccgcctccgccgctggagcggggctccggtgctgcgtcagcggcggcagggccgggtcggcggcgtggtgccacgcgtcggcggccggcagcgtggcgtcgtcgtcgtcggagctggaggccatccggtgggggaccgccaagctgcagggcgcgcgcgacgagatggaggacgaggtcgtcctccgccccggctccctcctcgacggcttctccttcgccgccgtcttcgacggccacgccggattctccgccgtcgagttcctcaggcacccccctccctgattctcctcctgctcttcgtcatggccgctttccgcgctaacctctctccttggcgctgacatgcagggacgagctgtacaaggaatgcgcggcggcgttggacggcggcgcggtgctgagcaccaagaacctcgacgccatcaccgactcgatccagcgcgccttcgccaccgtcgacgccaacctctccacctggtcaggcccagttaggattccgctgaacaattccgattgccttctgcttagattagctactaaggccctgtttagaactccggcaaaatttttcaccctgttacattgaatatttggacacatgcatggactattaaatataaacgaaaaaataactaattacatagatggcgggtaaattgtgagacgaatcttttaagtctaattgctccatgatctgacaatatggtgctacagtaaacatttgataatgacggattaattaggcttaataaatttgtctcgcagtttacatatagattatgtaatttgttttgttattagtctacatttaatacttcaaatgtatgtccatatatccgatgtgacacgtcaaaactttacaccctggatctaaacacagcctaattcctcgcatgtttaacgctgtgtgacgtgacgcctgcttcttcttcacaggctcgagcagatggacaaggaagatgagtccggcgccacggccacggccatgttcctcaggaacgatgtccttgttgtctcgcacattggcgactcctgcttggtactaacaattccctacacataataacatgcgtatatattaatcaattatcaatttatcatatatcccgttgtcattggctagtgcatcgtgattgtgatgctgaagtgaattgtgagttttattctgctgatgatgagggtgggtcttgaatgttgattagcaggtcgtatcacgcggtgggaggcctcaagctgtgaccaacttccaccgaccgtacgggaacaagaaagcgtctcttgaagaggtgaagcggatcagagcagcaggtggatgggtgtgttttctcttccagagttccactctaatcttctaaactaccgttcttctagttttgtaaagatcatgttcacataatttagtatagagcgcttacgaaaacctgtcctcagctcagcaagtccttaacacccatgagaaaataacaatatgttgcctttccccataaagattgcagttcatttttcaaatatggccatatggaacaataatcaacaggattgacccggtgaaattctagcacattgtttgctcttctagtttgtaattcacattctaagttagtggttactagtcatactactgctgtgggcctgtggttgcatattgtccatttagacccattattatggttttacagagaataaatgggtttggtgctgtatggagtaatataatatgctgatggatattttgttcactgcttgaaatgccgatctcactcatgtgactcttctttgttacgatatcgatgtactttttgtagattgttgatggacgcatatgtggagaaatttctgtgtctcgtgcttttggagacattagatttaagacacggaagaatgagttcgtcccttatactctctgttctctgttcatacattaagcataccttttgttacattatttcgaaacaataccctgctaatttttaacttctcatggttttgtacaggatgttggtaaaaggagttaaagaagggagatggactgaaaagtttatctcacggttaagctctaatgcttttgttcttatgatttttttatgacttgttgtcaagtatttgtttttcttttgtattgatatgttccgttacatctgaattcagaaacataccaatgcagctattcttaattctgatcaaacagcgaggccatttgttcagttacatcttctcttttcattctcatggtgaaaataaaacacaatagcagggctaaatatcatctgaattcttagccacaacttaccctctactagtatgtaataacctgatttctttttcttatatgttgacaattatcaattgagttccttatcaactgttgccaagataatttgagagctaattactgaccatacattctcaattatatatctgcttactctcaagaacaaacattcttcagtattccaacttttacaccttttattggcgaatgctgctgctgcatgtcatgagatgtcttaactacacaatatgtctcttcttctgtgattatgtatgtaatcaatatctttcttgcagaataaattttaaaggagatttaatagtctcttcacctgacgtatccctggtcgaacttggaccagatgtggaatttgttttgctagcaacagatggtctttgggattacattaaaaggtatgtacacaaatctttttattgtgtagttgtcctgcttatattcgttcttgtctgcctcctgaagacatcttagttggctattcaacactttgacatgtataatttggctatcttatatagctctgaagcagtagcattagttagggatcaactacggcaacatggggatgtccaggtatgaagtttatttcctctcaaatcaagaactcattatgtttctttttgcaacttatttttaatattgcttatttttcatttgtttgtgtaggttgcctgtgaggcacttggtcagatagctctggtattgactcttgccaccttttactttgccacttatctattctcttatttataaagttaattatcaaatatgatttggtggaccctgcatatcgaaaatgctttcttaaatttcttgctttatttccaattgcaggatcgtcggtcgcaagacaacattagtatagtcatagctgacttggggtaatgattcttaacctttacattggatgtttgtttagaacgaattcaagcattttgtgcatgaacgatgttgtccttgttctagagttcttcccattccgatttcaaacgcattatgagatgatgcccatttcgcacaatttgctccttttccgtcactataatcaggctatagtggatctctttggtcttggtcagcatctcttaaccacattcactgtatcttatttcttggcaggaggacaaactggaaggagctgcctgctcaaaggccaaatttattcttggagttaactcaagcagttgcaacagttggggccgtctcattagggatttatatttcatcgctccttgcgttgcagtaggcctaggtagttctttcaagtgtgtatagtacttacagttttacggtctgcaacttctagctgcaaataatgtacattcttatagggtaaatgcataggatatccgttgaatatgtacttcagctcctgctggccaagatattaatggggctcttttttttttttctggaagatcctttgattcatctca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0552300, RefSeq:Os01g0552300

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0552300&oldid=26036"