Os01g0553400

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0553400| Description = Cyclin-like F-box domain containing protein| Version = NM_001049850.1 GI:115437517 GeneID:4325855| Length = 4358 bp|...")
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Gene Name

Os01g0553400

Description

Cyclin-like F-box domain containing protein

Version

NM_001049850.1 GI:115437517 GeneID:4325855

Length

4358 bp

Definition

Oryza sativa Japonica Group Os01g0553400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22462650..22467007

Sequence Coding Region

22463749..22463889,22463970..22464824,22464927..22465085,22466630..22466914

Expression

GEO Profiles:Os01g0553400

Genome Context

<gbrowseImage1> name=NC_008394:22462650..22467007 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22462650..22467007 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagccagaagagcacacatggaggatgggatctgtccagtaaacaaaaggaggagattggcgctcagcccatgtgctgaagtatataacagcaagcggataagatcacaatgggttgattttcaatctctccctgaggacattctgtcaaggataatgtcaaaactaacattgaagcaagctgttcagatgagcatggtatcgagtgtgttcagaagagcttggattttccatcctgatcttctttttggcactgaagaattgtttggaacttctgatcgacagttgagagcgctgagcaccaatgggtttattgacacaatcaattttatcttgaggaaacacagtggtctaggagtgagtgattttggtgtgaagtttgagctgtggaaggagcatgcacgtgacattgatggatgggtttcctttgctattgcatcgaaagcaagggttctcgtcctgaacttttctccatatataggattgcgagaaaacagttacagctttccatgtcatcttttcaatgacagaaatggatcccactttaaggttcttcaacttgatactgttacttttggcccaactcctgacttttgtggctttgctaatcttacaatgcttactttgaagcatgtgcttgtattggacaacttccagtacttcttaccgaaatgccctgccctagaatggttggaaatcctaatgtgctcccagctacataatttgcatgtttctgaaccattgccgcggctggaatttttgcgtgtacaaggttgtgcgattaacaagattgagctccatgcccccaaactcaccacatttgagtatagaggttgttttaaagtgattattgcacttcacaaatgcttgaagcttaagactgcaagcattgcgtctcatattgaggacaaccttgagtatgttttcactgggcttccaaatggattacctcatgttgagagactacatgtgaaagtgtttgtgaggactcagatacctggatttacacagccccctcttaaatttatcaatttaaggcatctgatcatgaggataacctttggaagtgctaaacgttttggaaaaaacgcagttctgcagctagcatatcttttggaagctgctcctttgttagtggaccttcatttggatatgacgtgtgcagatatttgtgaggacccccctgctagggacgtgattatacatcgcccctactacaatctcaagagagcttgcatgaccggatttaatggtaatggaggtcaaattgccctagtaagatttatcctcaggaatgcagtaaaattggagaaaatgactatagttccaaaagggagaagaacgggcaaaatgatgggagaatacgaattaagccttagaatgatcaggaaaaaaattgttccaaaagacaagaacggtgtactcgtaattttgtag</cdnaseq>

Protein Sequence

<aaseq>MPARRAHMEDGICPVNKRRRLALSPCAEVYNSKRIRSQWVDFQS LPEDILSRIMSKLTLKQAVQMSMVSSVFRRAWIFHPDLLFGTEELFGTSDRQLRALST NGFIDTINFILRKHSGLGVSDFGVKFELWKEHARDIDGWVSFAIASKARVLVLNFSPY IGLRENSYSFPCHLFNDRNGSHFKVLQLDTVTFGPTPDFCGFANLTMLTLKHVLVLDN FQYFLPKCPALEWLEILMCSQLHNLHVSEPLPRLEFLRVQGCAINKIELHAPKLTTFE YRGCFKVIIALHKCLKLKTASIASHIEDNLEYVFTGLPNGLPHVERLHVKVFVRTQIP GFTQPPLKFINLRHLIMRITFGSAKRFGKNAVLQLAYLLEAAPLLVDLHLDMTCADIC EDPPARDVIIHRPYYNLKRACMTGFNGNGGQIALVRFILRNAVKLEKMTIVPKGRRTG KMMGEYELSLRMIRKKIVPKDKNGVLVIL</aaseq>

Gene Sequence

<dnaseqindica>1100..1240#1321..2175#2278..2436#3981..4265#gggggtgaccttgtggttggggtggggagcattggaagcggcggcggtgaccccatccatcccggacgacgacggcgccgatccctcccggcctcctccccgtcagccgccaccaagatttggatccgagtctcgcgaggaggggaaccaagccggattagtagtaggagtagtatatttcttcttcttatagatatggacggactgggacggggttgagcagcaaagcaatggacacagcaggcgccgccgcccaccaccgcaggtagcttgaccttctccccttccgaatcctctcttagatttgtaggaaatctcaaacctaccgtttcctctgaaattaacagcgacataatcttcttcttcttttaccgtttcccctgaaattaacagcgacataatcttcttcttcttcttttactcaagtttctggtggcacctgcattattacgtcattgcaaaagctgctccttctggattacagtcaccctcttcctctattgaaaatttagattactttttgcttggatggctggcgagaatttatcttaccatctgtcatgactaaataacaagtgggattgtaactagactatactggtgtttatcaccactaatgccagtgtttgaactcattctcaggaaaattattttattctcattttgtccaagacaaattttgttcacttcattgaacgcatgcatattctagttgtaaacttgggaacgttctagttttcactcagataggaattaggagctatttatccttttcttttcactgtcctttgataacaagttaacaacccatagatcatcccttaccttttcctcattttttttccctgtttggttacaaatgaacagaaatactaactgcgatagcgaactcttaccattgcacttcagctgttcagtgtttacgtaataagtttaagaattatattgataacatctaatctctggaatgcatcatctccaaagattcatagctagacaacttattgtttattatcattgctaaaggaatttcttgcactcttgcatatgcgccatcctgaaccattgctcattgtttctagtcttcataggtagtagcatgccagccagaagagcacacatggaggatgggatctgtccagtaaacaaaaggaggagattggcgctcagcccatgtgctgaagtatataacagcaagcggataagatcacaatgggttgattttcaatctctccctgaggtatgtacgttaaacttaggatcaactctactaaatgtgctttagggactgcctgatgttttgtccacactcatcaccaggacattctgtcaaggataatgtcaaaactaacattgaagcaagctgttcagatgagcatggtatcgagtgtgttcagaagagcttggattttccatcctgatcttctttttggcactgaagaattgtttggaacttctgatcgacagttgagagcgctgagcaccaatgggtttattgacacaatcaattttatcttgaggaaacacagtggtctaggagtgagtgattttggtgtgaagtttgagctgtggaaggagcatgcacgtgacattgatggatgggtttcctttgctattgcatcgaaagcaagggttctcgtcctgaacttttctccatatataggattgcgagaaaacagttacagctttccatgtcatcttttcaatgacagaaatggatcccactttaaggttcttcaacttgatactgttacttttggcccaactcctgacttttgtggctttgctaatcttacaatgcttactttgaagcatgtgcttgtattggacaacttccagtacttcttaccgaaatgccctgccctagaatggttggaaatcctaatgtgctcccagctacataatttgcatgtttctgaaccattgccgcggctggaatttttgcgtgtacaaggttgtgcgattaacaagattgagctccatgcccccaaactcaccacatttgagtatagaggttgttttaaagtgattattgcacttcacaaatgcttgaagcttaagactgcaagcattgcgtctcatattgaggacaaccttgagtatgttttcactgggcttccaaatggattacctcatgttgagagactacatgtgaaagtgtttgtgaggactcaggtaccttaatcccaatgcataccctccaaaatcttcaatcaagtatgtgtgtgggtgtgtgtgtgtgtgtatttgtttcagaatttccttggcgtctttcagatacctggatttacacagccccctcttaaatttatcaatttaaggcatctgatcatgaggataacctttggaagtgctaaacgttttggaaaaaacgcagttctgcagctagcatatcttttggaagctgctcctttgttagtggaccttcatttggatgtgagttattatgccatctgcaccttcatcctgtttgtagttttaaatactctgtaatctcatttttatactttactcctgtctaatgtgcccacacttgctttatatgtctatttaattttaagtattgccttgagtcaaaattttgatactggaactgtgggggcaggccagcctattagaccacataaatctcaaagtggccatgagctgaaacacagcaacataatactactagctagtatgcgactattggcacaaaacacataataattcatactctatactattctaaaagagggcaatgccggtggtagtgaatttaccacccaccaactctattatatattgttgtactttaatattaatattacaaaatagccctatatattggttctatcttatttcaaatctaaaataaaatttcttccaaacaatattatcatgcggatataattcatatttattttagctagttatcttgaattccattgaaggtttgtacaagatatgtacttaaatcaataacaatccatagttttaccttgttgagtatcttgattgtgaagtggctttaaggagcaatcttgcttggtagttaattatagagtaaatttcagaagactgcacttttattgactaaactatcactttgctgcaacctttgcgacacttttcaaaaaactgcaacattagcattgaaaattatcacatagctgcatttttttcaggattccctgtaactgacattccgggcccacatgtcatacatatatgctcgagagagggaggaacggagcggcacgtcagcatgccacctcatggctttttttactgtagcgatgccatgtcagtgcgtgttcgggcggaaaaaatcgtggtccagctgcaccatttggctcggtcaagggcacaggccgacagggtcaaaggcaggtccaagacctgataacgacacattactactcccccgattcccaccatcaccaccgcaatcttcctagtcgatgctgggaatcgaggcagtagtacggtgagaatcagggcaatagtaatgtgtcgttatcaggtcttggacctgcctttgaccctgtcggcctgtgcccctgaccgagccaaatggtgcaaccggaccacgatttttccctcccgaacacgcactgacgtggcatcgctacagtaaaaaaagccatgaggtggcatgctgacgtggcgctccgttcctccctccctcaagcatatatgtatgacatgtgggcccggaatgtcagtaacagggaatcccgaaaaaattgcagctatgtgataatttctaacgctaatgttgcagttttctaaaaagtggcgcaaaggttgcagcaaagtgatagtttagtcaataaaagtgcagttttctgaaatttactcttaattatatgcacttgctttagcttgtggggggctattgcatatctgccactagctagtgaagattttgtgcacttggttgtcatgctattgatttgtttgtattgacagaaggtgacatataattttgtgtgcagatgacgtgtgcagatatttgtgaggacccccctgctagggacgtgattatacatcgcccctactacaatctcaagagagcttgcatgaccggatttaatggtaatggaggtcaaattgccctagtaagatttatcctcaggaatgcagtaaaattggagaaaatgactatagttccaaaagggagaagaacgggcaaaatgatgggagaatacgaattaagccttagaatgatcaggaaaaaaattgttccaaaagacaagaacggtgtactcgtaattttgtagtaattctcaagttatgtatgtactattataggaagggctggacttacatgcccttgtactttttcagaaacaataataatagtgcatcttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0553400, RefSeq:Os01g0553400