Os01g0555300

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0555300| Description = Conserved hypothetical protein| Version = NM_001049855.1 GI:115437539 GeneID:4324562| Length = 3419 bp| Definition ...")
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Gene Name

Os01g0555300

Description

Conserved hypothetical protein

Version

NM_001049855.1 GI:115437539 GeneID:4324562

Length

3419 bp

Definition

Oryza sativa Japonica Group Os01g0555300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22599148..22602566

Sequence Coding Region

22599333..22599629,22599725..22599956,22602333..22602532

Expression

GEO Profiles:Os01g0555300

Genome Context

<gbrowseImage1> name=NC_008394:22599148..22602566 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22599148..22602566 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgtcgtcgaggaaagagagggcggcggaggcgagggcgagcacctccaagccgtctcctgcgccggccccggcgccggcggtccaggtgcagcggcggccggtgggcgggggccggtggacgagccgccggatatcgttctacgcctcccgcgccttcttcctcctcatcatcctccagatcccgctcttcagggtcccttgtagagcaggcacatgcacaacgcccattcaagttacatcttcgcagttggtctcaaatgagatattcccaccatctgttgtgaaagcccttctcttccctggggctatagcaagcaaccttactaagagcatgacatttcctaggtggaatgacctgtttgatatttacaatttgacagaagccaagaccgcttcagcagtaattgatctccagcgtctagagattcttgctggaagctacttctgtgctgctggagcacttgttggtgtcataaaccctgggaggatgaccttgtttggtacccttttggttatctggggtctagtgaaagaagcgctctttgggaaaccggtgaacagtgatccaacacaatcagttcatgtttatccgaccattttaattgcactgatttgtgcattcttgtcaataacttacaatgtaaagaagacagtaagaaatagtcagtctgtttcaatcactaagcctctgcaaagttctgccaagtcgaaactgaagtag</cdnaseq>

Protein Sequence

<aaseq>MAPSSRKERAAEARASTSKPSPAPAPAPAVQVQRRPVGGGRWTS RRISFYASRAFFLLIILQIPLFRVPCRAGTCTTPIQVTSSQLVSNEIFPPSVVKALLF PGAIASNLTKSMTFPRWNDLFDIYNLTEAKTASAVIDLQRLEILAGSYFCAAGALVGV INPGRMTLFGTLLVIWGLVKEALFGKPVNSDPTQSVHVYPTILIALICAFLSITYNVK KTVRNSQSVSITKPLQSSAKSKLK</aaseq>

Gene Sequence

<dnaseqindica>2938..3234#2611..2842#35..234#aagcaaagcatctcgcgccctagccaagccagccatggcgccgtcgtcgaggaaagagagggcggcggaggcgagggcgagcacctccaagccgtctcctgcgccggccccggcgccggcggtccaggtgcagcggcggccggtgggcgggggccggtggacgagccgccggatatcgttctacgcctcccgcgccttcttcctcctcatcatcctccagatcccgctcttcaggtcgcccccttctcccctcccccaatcccctctgatttacctctgtttccgtgtcgatcgtgcgctgaatcttagctaactcaagaacgcctgattaatctcgtggacgctggtgctgcttggcgacttggggcgtgattaccagatcaagaacggctgggacgcagcacacattcgtgtaggggatgcagggtacgggccttagataggcataattgtggtagaattccatcgaattcctcgattccatgcaaagcctactgccctaaatgttgtgttgatggggaaaggtaggcggtgtactcacatctcgtcagttacccttgttggacaagaagctgttaaagcctccatagtttcaagcggttaaaagcagccatagtttctcgatgtgcagggtttcagtcctcgggccgaaaagcatgattcaggttgcaaaatttggtagaaggcgagttcaaattaggcaaaatttgccacaggacactcaaaaaatgtgtaattggctgagagacaccgcaaaaacgtgacacggctaatggacactacaaaaaaaatttgtgtaattagctataggacaccagagacaatattttataatttttggtcaaaagaggtgagcaatttttcgaaatggcgagattgcccttggcgccatcttcctccacctgaaatcacaaaattagctgggagcagccgccgcgcaaggttgtcgacggcgaggcaggaggaggccgcggcggcgtggagcgcgtagaggaggcggctgcgcgcgaggccggcgacggcggcggccgcgcgcgaggcctgcgatggcgaggcaggaggcggccgcgcgcgaggctggcgatggcggcggccgcgcgtgaggcctgcgatggcggcggccgcggcggcgcggagcgtgggcaggaggcggctgtgcgcgaggcctgcgacgacgatggtggccgcacgcgaggcctgcgacggcggcagccgcgacggcgcggagcgcgccgaagaggcggccgcgcgcgaggcccgcgacggccgcggccgcggcggcgcggagcgcgtggcaggaggtgtccgcgcgcgacggcggcggccgtggcggcgcggagcacgggcaggaggtggccgcgcgcgaggccggcgacttgaacggttgctggcacccttgctgtagaagagcttacgcacgggcacggtggccatgtccatctcggtgaccacggccttcttcgtcgctggcttcttcaaaacgctctgctgcttgcctgcttctgttgcgcaacagcagttgttgaccagccgccgacgccgacgccgacgaggtcgcgcaggcgccagcgccgcgatgatgaggacgacgactccgccagcggaggcactcttgggaacctgtcgtggatgggcgagccatgggaggaagatggcgccaggggcaatttcgccatttcaaaaaatttctcaccgcttttgacccataaattataaaatattgtctccggtgtcctatagctaattacacaatttttgtagtgtccatcagccgtgtcacgtttttacggtgtctctcagccaattacacattttttgagtgtcctgtagcaatttttttttttgcggggaatcctgtagcaaattttgccttcaaattaatctagttttgtactgacgtgggaaattgtgtctatattctgatagaactcggtaagagtcaggttgtgacttgatgagaccatatcttggttccccttaaaccctggatcggcttgttcttttttgtcctgaatcgaatagtttcttgctacggtttctgtcataaatttaccaatatgagcaaaccatgtagcgctctcaactatggttgcctcaaaatggatcctgtatgcatatcactacttgccagtaggtttgattttagtgcataggtgtgtatggtagtaacagattaatgtggtagttcaacttcttccctgctattgctagattgatgggctacttttttgttgccattcctgactgctcaatgtggttcagttttggactggatctacgtagagggaattctctcctatcttttcatatattacattgtttcataagagtcctataatttcatatcaagattttcccatacctgtacacgtgctagtgcttttatctggactcgccttttcctcctgagcatggattctaggaaattgtatgttactttgcttctgtaaccatgcttgcttattttaccaaattacattttagtttattgcttaaggttgtcatgattgataaggtcgattttggaaactaaaatacttggaagtacttttctgagtaggacgataaatatactaagtagattctgcttaccttcttctgccatttcagggtcccttgtagagcaggcacatgcacaacgcccattcaagttacatcttcgcagttggtctcaaatgagatattcccaccatctgttgtgaaagcccttctcttccctggggctatagcaagcaaccttactaagagcatgacatttcctaggtggaatgacctgtttgatatttacaatttgacagaagccaagaccgcttcagcagtaattgatctccagcgtctagaggtactctttttttttttttaataactggccaactttcttaagcagataattgtgacaattgttacactttactctctttctcacttctcaaccagattcttgctggaagctacttctgtgctgctggagcacttgttggtgtcataaaccctgggaggatgaccttgtttggtacccttttggttatctggggtctagtgaaagaagcgctctttgggaaaccggtgaacagtgatccaacacaatcagttcatgtttatccgaccattttaattgcactgatttgtgcattcttgtcaataacttacaatgtaaagaagacagtaagaaatagtcagtctgtttcaatcactaagcctctgcaaagttctgccaagtcgaaactgaagtagacacttcattgtctatttgccccttcatccttgtagttcatttccacaaatttattgttgaagactggcccaaaggataacactactgtggttcttgtgtaccactttgaatactgtaaccttcagttttcacctttgtatcaaagacttatatctataacttttattgcaagcatattcacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0555300, RefSeq:Os01g0555300