Os10g0490400
| Gene Name |
Os10g0490400 |
|---|---|
| Description |
Zinc finger, SWIM-type domain containing protein |
| Version |
NM_001189288.1 GI:297727706 GeneID:9267000 |
| Length |
7949 bp |
| Definition |
Oryza sativa Japonica Group Os10g0490400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:19070569..19078517 |
| Sequence Coding Region |
19070569..19070630,19070713..19070781,19070850..19071816,19072471..19073190,19073324..19073413 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:19070569..19078517 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:19070569..19078517 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgcggtgcgggcaccgggtcaggatcacggcgagcggcggcagcgggaggtcggtggtggcgaaggtggtggacgagtgcgactccgtgcacggctgcgacggcgagcacaactacgagccgccgtgcgacaacaacatcgtggacgcgtcgccggcggtgtgggacgccctcggcctcgacaagagcgtcgggatggagcacatcacctggtccgacgatggcgatgaatccaaagtcagatcgaagaagatagacatggagagcgaaaagaaaaaggcaaagaagaaaagagaagaagaagaaccaaaatccaagatcaaatctgaagaaaaaatcaaaacatcaagatccaaacaaggaatgaaatttaccgaaccagttcgcattggacccctggagaaaaaagaattgaactcaatttcagaacataaacagaaagttagcttcgagacacagggaaataaacaaaaccatatgaaacaaaatgcaggaataaggataatgccatatgctgaaccaaatgagaatagcaagagtataacccaaggaagcaaagagggtaacaacaaaacaatacagtcaggtacaaatattcatcaactacaagatggagaaagaagtttaaaagaatcagagagaaacaaaatagatacaaagcatactgaagaaacaagttctagtatcacacaaattacaggaatcggcacaacccaatcgccacaaagcccagcattactacatgatgagttaaccatgcttaagtcacatactacaccggtagcacagttgtcgtacacaagtctaatgcaccaagtaataaatagtccaaggattaacatagaaccaaatatgggaggaagaggactagaaagtttcacaagtatgcttcaaacaccatcagcatataataattcaatgatactaactacgagcagagtttgtgaacaagacatgctgctggaagacagaaacaatgacctattaatcccaagcaaacattacagttaccaagaatttgatgaaatctacaacagtgcaaggatcacaccagagattccagttgacaaaactatggaggaattgtacaaattacaaaacacacatttgaaatcacaggctacatatcaaaaatttattgtaagagatatctgcagggaattcctacaagctgggccactcagaacagagatcaagaggactttgaaaccatacaatgaaaactttcatgagcaagatattgaagagcaacaaacaagacctgaagcaacagaaatttcagggatacaacagcagcaaacagaggctgaaatgaatgataatttaaattcagctactaacaacggggaggaattaagtgaggaagacattgacaatttcttacaaaatgaagaggagagcagtttaccaatagatgataaacacatacctaagctaggaatgaagttcaaatcacatacagaagctagaggcttcttcaacttctatgcatacctagccggtttttctgttgtgattgcgcaccactacaagacaacaagcaagaaaagacaaggtgaaattacaaagtacacatacaaatgcaacttgcaaggcaaaaatgaaccagcaaacaagaagaagagcaatgaacaagttactgaacagcagagggaaacagtagtcctagtcaaaacaaattgcaaatgtacaatggtagcaaaagaagttggacagttttggcaaatatcaaggcttgatctgaatcataaccatgcactttgcccaagaagagaagctaaatttctgaggtctcataaggatatgacagaggaagaaaagagactaataaggacattaaaagagtgcaacataccaactaggagcatgattgtgatattatcatttctccgaggtggcttggcagcactaccctacaccaagaaggataatagagctcagtttgtgcctgtctacttcaaatatgatttctgcccttttatacaaagcacagcgctgagtgagggaacaaatagcagattcaaaagaggagttggaccacaacacagtgtgatgagttttatgaaggaatatgagaacataaatgatactatctttgatactgagtacagcaaagatttccaatcaaggacaaaaatgccaaaaacactatggttcaactatctcattgaagagcaggcatcggaactatataatctagacatattcagaaaattccaaaatgaattaaaggatactttaaggttgcaagtatctgtgatacaacagggcaaagtgtatgaagtgtttgtgtcacctaatagcatccagcaagaatatagacaaaggaaacatatagtgatcattgacttaccaaatgaaaacttcggttgcatttgtgggaagttctctaaggatggaatgctatgttcacatatcctgaaagtgatgttggaactcaatgtgagaaaaattccagaaaaatacattattgatagatggagaaaaaaagaaaagaaggagaaagtgaaaggcagcatacatacagatgcaacagacaactctgttctgatgtttaatgttctatcaaggaaaggtgctgacatagcatcaaaagcatcaaaaagaaaaagaacatatcagttcatgatggaggaacttgagaaattagaaatgaatgtgcaattgatgattgaacaggaggccgaaacacacctgtcacaagatgaaagcaacacagtacaaaatgatactgtgcagcatgcagaagaagagataatagaagaagtggaaatagaagacccagatttggccaatactaaaggaagaaaaccaaaaagatatagaagaatagtggagaagatgatagaaacttcaaaaaggaaaagtaaagatgagcaacacacaacagaaacaagaacaagtgagataaccaatatagggaacaagcaagaagagatgaaaacatcaaaaactacaaaaagaagaaagaaaaacaatactcaagaggaaactcctaaagagaagttgcatgcaaagacaagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MARCGHRVRITASGGSGRSVVAKVVDECDSVHGCDGEHNYEPPC DNNIVDASPAVWDALGLDKSVGMEHITWSDDGDESKVRSKKIDMESEKKKAKKKREEE EPKSKIKSEEKIKTSRSKQGMKFTEPVRIGPLEKKELNSISEHKQKVSFETQGNKQNH MKQNAGIRIMPYAEPNENSKSITQGSKEGNNKTIQSGTNIHQLQDGERSLKESERNKI DTKHTEETSSSITQITGIGTTQSPQSPALLHDELTMLKSHTTPVAQLSYTSLMHQVIN SPRINIEPNMGGRGLESFTSMLQTPSAYNNSMILTTSRVCEQDMLLEDRNNDLLIPSK HYSYQEFDEIYNSARITPEIPVDKTMEELYKLQNTHLKSQATYQKFIVRDICREFLQA GPLRTEIKRTLKPYNENFHEQDIEEQQTRPEATEISGIQQQQTEAEMNDNLNSATNNG EELSEEDIDNFLQNEEESSLPIDDKHIPKLGMKFKSHTEARGFFNFYAYLAGFSVVIA HHYKTTSKKRQGEITKYTYKCNLQGKNEPANKKKSNEQVTEQQRETVVLVKTNCKCTM VAKEVGQFWQISRLDLNHNHALCPRREAKFLRSHKDMTEEEKRLIRTLKECNIPTRSM IVILSFLRGGLAALPYTKKDNRAQFVPVYFKYDFCPFIQSTALSEGTNSRFKRGVGPQ HSVMSFMKEYENINDTIFDTEYSKDFQSRTKMPKTLWFNYLIEEQASELYNLDIFRKF QNELKDTLRLQVSVIQQGKVYEVFVSPNSIQQEYRQRKHIVIIDLPNENFGCICGKFS KDGMLCSHILKVMLELNVRKIPEKYIIDRWRKKEKKEKVKGSIHTDATDNSVLMFNVL SRKGADIASKASKRKRTYQFMMEELEKLEMNVQLMIEQEAETHLSQDESNTVQNDTVQ HAEEEIIEEVEIEDPDLANTKGRKPKRYRRIVEKMIETSKRKSKDEQHTTETRTSEIT NIGNKQEEMKTSKTTKRRKKNNTQEETPKEKLHAKTS</aaseq> |
| Gene Sequence |
<dnaseqindica>7888..7949#7737..7805#6702..7668#5328..6047#5105..5194#4998..5060#4770..4913#4609..4665#4456..4530#4300..4379#4086..4199#3878..3970#3583..3666#3277..3324#799..929#1..233#atggcgcggtgcgggcaccgggtcaggatcacggcgagcggcggcagcgggaggtcggtggtggcgaaggtggtggacgagtgcgactccgtgcacggctgcgacggcgagcacaactacgagccgccgtgcgacaacaacatcgtggacgcgtcgccggcggtgtgggacgccctcggcctcgacaagagcgtcgggatggagcacatcacctggtccgacgatggcgatgagtgagctactatagactatagtagtggcattcatgggctggagggttcgactatgttcaactgctggtacatgttgccatgtcgaattgccgtcatctatctatatctagcttgtgtggtcatataggaggccgttgtcttatgcacttttagcccattgggctgtaaatttgatatggtatttgttgcgttcggttacaacttacaacatctccgtcctatttttatttcagttagggtctctctacacatcattcgacaaattttcaggccccaaatttgtcagatttctgatcccttggattagcatccaacggcagcaaaaataaagaaggaaacaaatagaaaaaaaataaaaggcctaaattgggccaaaattgcaacgtgtaaatataataatgggccgataaaatcatattgggccaaaaacacaacaaataattttatgattatagcccaaaatcaatcaacttggcaatcaagaaagctggagaaaaggacagcacatacatcacgtgatcaaagcacacatccagcgaatcaacgcttctcccatccaaaacagatccaaagtcagatcgaagaagatagacatggagagcgaaaagaaaaaggcaaagaagaaaagagaagaagaagaaccaaaatccaagatcaaatctgaagaaaaaatcaaaacatcaagatccaaacaaggtcagttaattaacaagaaacaatcatatagtaaatacagaaaattacactgtacatacacatgttgaactgaaaaatttgcaccatacaagcacacaacaatatatttacacatttctagtacagttcatagctagtgcacacatgcaacactaagaagcagaactttgcaaatttttgcaagaaaaacaacagtataaaaagaattataaaaagttacattatgaaatatgtaaagttacagatgtaacttcagttatactgacatgtaactgcagtgtaaaaacagtcaaatcataatgtaactaacttgacttcagttatacttgacttgaagaacaattggaacaatatcaaaacttacatcaccacagaccttaaattacatttgtaattcatatatatttccaatgtaactacaactgtaatttccattgttttatcctgcaacttcatacaaatctattgccatacaaaatgcacatgccatatataaaaaaaacacactaagttatcacatattcctacaataagcattctctccaaatccaatttctgttaagtagcaagaatcattcatgaaattactacaaaaaggtccaccataaaggcacacagcaaatatatttgcccatttctagtacagttcatagctagtgcacacatgcaacactaagaagcaaaactttggaaatttttgcaagaaaaacagtagtataaaaagaactatagaaagttacattatgaaatatgtgaagttacaattgtaacttcagttatactgacatgtaactgcagtgtaaaaacagtcaaatcatattgtaactaacttgactttaattatacttgacttgaagaacaacttacatcaccacagacctaaaattacatttgtaattcatatatatttccaatgtaactacaactgtaatttccattattttatcctgtaacttcatacaaatctatttgtagcgccatacaaatgaaatgaaagctaacactaatttttcagagaacaaaaacatcaatttggtaaaaaaaaaccaacattcaaaaacttcatatacaataatgtttagaaactgacatatcatctgaagatataaatctgatcagatcatgaactccattagataatatcatttcattaaccactgactatacaacaaaccacattaaaacaagttggacaaacttctttaaacaaaaatacttgatcactaaaaatgtacatttcaatttaatatgcacatgggatcagttggacaaatatgagggattgacatgctagtccaactggagtattgcaatagaacaagacagtcacaatcagcaaatgtgcacgtagaataatcagcagtgcaaattaaccacttttgaaaacatatgtaacaaatgccaaatcagaagtccaaaataaaaaaccaattttgtaataaagctacaagcaatgagttaatcagtcaagtggaatttgtgcagcaattaaaggtcaaagttagctatcaatgagttaataaagctacatgcaatgagttaatcactcaatggctctaggatatcattccaaacaagcagcaacttcactggaaagaacagggagaaacaataaaatagtaaacaggacatggcaagcacactgccaatccgcaaaaagtcagaaaattcagagaaaaaatatgacatgaaataaatctgataatataaagttacagtccttgccatcagataaatatgaaaaatatctctaattaacaaataaatatgcaatcagatataaaataaacacctacattaagcattctctccaaatccaatttatgttaagtagcaagaatcattcatgaaattaatacaaaatgtccaccataaaggcacacagcaaatatatttgtccatttctagtatagttcataggtattacacacatccaacactaacaagcaaaactttggcaaattttgcaagaaaaacagcagtataaaaagaactatagaaagttacattatgaaatatgtgaagttacagttgtaactttagttatactgacatgtaactgcagtgtaaaaacagtcaaatcatattgtaactaacttgatttcagttatacttgactatataactatatcgaaacccaataaagtttcagatttacatcacttcatatatttgataaattacattagtaattagataaattaacatttataaaaacaatttgtcttgcatataagttcattttaattttgctgcatatgctttgaaaataaatatctactacttagcattcttgtaagatggtttcagcagtcaaatatactaatttattctatgaattttgcaggaatgaaatttaccgaaccagttcgcattggacccctggagaaaaaaggtaaaaaaaaaagtagactattcgagaccaagatgcaaaatagcaaaaaaaatatataaatatgcatgatcttatataatttttaatactcataaaacatggaaaatttgtgtcattcaaattaaatttcatctatatttacatgtacaaataactaaagttacacatgtaagtatagttgatttgcaatataattagagtataacttcatatattctaggattctttcatttaactgtttgattttcttttgtgcagaattgaactcaatttcagaacataaacagaaagttagcttcgagacacagggaaataaacaaaaccatatgaaacaaaatgcaggtatgagatataagcataaagcagaaaatagacttaacaagcattaagcaagcatcaaaataattaaaacaccaggatttgtacagtgaatcagaagcaaaaattacatatatacatacatttaatttgttatgtaacttagtattattcttagatgatctgtataaacatgaattattatggtatcactattttgtgttatattttgtaggaataaggataatgccatatgctgaaccaaatgagaatagcaagagtataacccaaggaagcaaagagggtaacaacaaaacaatacagtcaggttagtaaacatacaaatccactgtgctagatcataaaaatctgacatgccaatacttgtacaaaaaagaaaagaaacatatcaaacttaccaataaaattgacacttcttgcaggtacaaatattcatcaactacaagatggagaaagaagtttaaaagaatcagagagaaacaaaatagatacaaagcatactgaagaaacaagttctagtatcacacaaattacaggtcagaaaaaaatgatactctttaaccatatgtaatttacgccaaatgaattcaatttgaaaattcaactagctgatccatcatgcttttcaattcacaggaatcggcacaacccaatcgccacaaagcccagcattactacatgatgagttaaccatgcttaagtcacatactacaccggtaatttgaataaacaagtaacatagaaaaatgcatgtcacaacactttatttgatactaacaaattgaaatgcaggtagcacagttgtcgtacacaagtctaatgcaccaagtaataaatagtccaaggattaacatagaaccaaatatggtaaggatatagattcgtaatattaatattattgtacaacagcatatgcttcactaacaaaatataaaaatgatgcagggaggaagaggactagaaagtttcacaagtatgcttcaaacaccatcagcatataatgtaagtttattttaaacttaatttatatacacagctactaatcgattttgcagaaatactcttgttaattgtatgtaatattttttaaaatttccacactgcagaattcaatgatactaactacgagcagagtttgtgaacaagacatgctgctggaagacagaaacaatgacctattaatcccaagcaaacattacagttaccaagaatttgatgaaatctacaacagtgcaaggatcacaccagaggtaaaaattgcaattacaaaaataaattataatcatttttaaatttgtatgagtagtatgctaacatttcatcaaaatatacagattccagttgacaaaactatggaggaattgtacaaattacaaaacacacatttgaaatcacaggtactttcattaattaataatttaatcatgttaaaatgatataggctacatatcaaaaatttattgtaagagatatctgcagggaattcctacaagctgggccactcagaacagagatcaagaggactttgaaagtgattaggtttgtaaaaaataaacatatagatcactaagaagattccaaagttatttctgttttctttaactagaattgtaaattagctttgcaaaaaaatttgatttactactattaatccttgttttcagccatacaatgaaaactttcatgagcaagatattgaagagcaacaaacaagacctgaagcaacagaaatttcagggatacaacagcagcaaacagaggctgaaatgaatgataatttaaattcagctactaacaacggggaggaattaagtgaggaagacattgacaatttcttacaaaatgaagaggagagcagtttaccaatagatgataaacacatacctaagctaggaatgaagttcaaatcacatacagaagctagaggcttcttcaacttctatgcatacctagccggtttttctgttgtgattgcgcaccactacaagacaacaagcaagaaaagacaaggtgaaattacaaagtacacatacaaatgcaacttgcaaggcaaaaatgaaccagcaaacaagaagaagagcaatgaacaagttactgaacagcagagggaaacagtagtcctagtcaaaacaaattgcaaatgtacaatggtagcaaaagaagttggacagttttggcaaatatcaaggcttgatctgaatcataaccatgcactttgcccaagaagagaagctaaatttctgaggtctcataaggatatgacagaggaagaaaagagactaataaggacattaaaagagtgcaacataccaactaggagcatgattgtgatattatcatttctccgaggtggcttggcagcactaccctacaccaagaaggatgtaagtaatgttgggacagcaataaattcagagacaagaaacaatgacatgaagcaagtgttgaattatctcaagaaaaaggaacaagatgaccctggaatgtactacaaattcaagctagatgaagaaaacaaggtgacaagcatgttttggactgatggtagatcgactcagctatatgaggaatatggtgactgtatcagttttgacacaacgtatagaacaaacagatacaatatgccatttgcaccgtttgttggtgttacaggacatgggtcaacttgcttgtttggttgtgcatttttaggagatgaaacggcagagacattcaagtgggtttttgaaacatttataacagcaatgggagggaaacatcccaagactataattacagatcaagataatgccatgagatcagcaattgcacaggtttttcaaaacacaaagcacagaaactgtctatttcacatcaagaaaaattgcagagaaaagataggaagcatgttctctgcaaaagcaaatagaaacctgtatgaggaatatgatgacatactaaacaattgcctaacagaagaagaatttgaagtgctttggcctcagatgattgaaaagttcagtttgcaaaatataaaatacttgcaactaatgtggaagaatagagctcagtttgtgcctgtctacttcaaatatgatttctgcccttttatacaaagcacagcgctgagtgagggaacaaatagcagattcaaaagaggagttggaccacaacacagtgtgatgagttttatgaaggaatatgagaacataaatgatactatctttgatactgagtacagcaaagatttccaatcaaggacaaaaatgccaaaaacactatggttcaactatctcattgaagagcaggcatcggaactatataatctagacatattcagaaaattccaaaatgaattaaaggatactttaaggttgcaagtatctgtgatacaacagggcaaagtgtatgaagtgtttgtgtcacctaatagcatccagcaagaatatagacaaaggaaacatatagtgatcattgacttaccaaatgaaaacttcggttgcatttgtgggaagttctctaaggatggaatgctatgttcacatatcctgaaagtgatgttggaactcaatgtgagaaaaattccagaaaaatacattattgatagatggagaaaaaaagaaaagaaggagaaagtgaaaggcagcatacatacagatgcaacagacaactctgttctgatgtttaatgttctatcaaggaaaggtgctgacatagcatcaaaagcatcaaaaagaaaaagaacatatcagttcatgatggaggaacttgagaaattagaaatgaatgtgcaattgatgattgaacaggaggccgaaacacacctgtcacaagatgaaagcaacacagtacaaaatgatactgtgcagcatgcagaagaagagataatagaagaagtggaaatagaagacccagatttggccaatactaaaggaagaaaaccaaaaagatatagaagaatagtggagaagatgatagaaacttcaaaaaggaaaagtaaagatgagcaacacacaacagaaacaagtaagtgtagcaagatcaagaatccacatataactataaattgtagaaataacaagttttttttgcaggaacaagtgagataaccaatatagggaacaagcaagaagagatgaaaacatcaaaaactacaaaaagaagtaataaacaaatcaattataatacatatacaaaaatgaaactatatataatgaaaacctaatgcatacttcttttttgcaggaaagaaaaacaatactcaagaggaaactcctaaagagaagttgcatgcaaagacaagctga</dnaseqindica> |
| External Link(s) |
