Os01g0556700

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0556700| Description = Similar to Dicarboxylate transporter| Version = NM_001049861.1 GI:115437567 GeneID:4324568| Length = 1701 bp| Defin...")
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Gene Name

Os01g0556700

Description

Similar to Dicarboxylate transporter

Version

NM_001049861.1 GI:115437567 GeneID:4324568

Length

1701 bp

Definition

Oryza sativa Japonica Group Os01g0556700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22695966..22697666

Sequence Coding Region

22695966..22697666

Expression

GEO Profiles:Os01g0556700

Genome Context

<gbrowseImage1> name=NC_008394:22695966..22697666 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22695966..22697666 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcgggacgcggtggactaccggggatgcccggcggacaggtcggcgacgggggggtgggtggcggcggcgctggtgctggggatcgagctgtgcgagcggctgtcgacgatggggatcgcggtgaacctggtgacgtacctgacgggcaccatgcacctccccagcgccgccgccgccaacgtcgtcaccgacttcatgggcacctccttcctcctctgcctcctcggcggcttcctcgccgactccttcctcggccgctacctcaccatcgccgtcttcgccctcgtccagtccatcggcaccgccctcctcgccgcctccaccctcgtcacccacctccgcccgccgcccggggagcagccgacgccggtgcagatggccgtgctctacgcctgcctctacctcatcgccctcggcaccggcggcctcaagtccagcgtctccggcttcggcaccgaccagttcgacgaccgcgacggccgggagcgcgccgccatgggcctcttcttcaaccgcttcttcttcttcatcagcctcggcacgctgctcgccgtcaccgtgctcgtctacgtccaggaccacgtcggccggagctgggcctacggcatctgctccgccgccatgctcgccgccatcgccgtcttcctctccgggaccaggaggtaccgctacaagcggagctccgggagccccatcgtccacatcctccaggtgctcgtcgccgcggcgcggaagcgcggggtcgtcaagcgcccgcccaccgcggcggagctctacgaggacgaccgccccgagcacgcccggatcgcgcacaccgcgcagttcccgtgcctggacatggcggcggtggtggccggcgaagaggacaacgaggtggccgggccgggcgggccggcggcgcccaacccgtggaagctctgctcggtgtcgcgcgtggaggaggtgaagatggtggcgaggctgatgccggtgtgggcgacgacgatcctcttctggaccatctacgcgcagatgatcaccttctccgtggagcaggccaccaccatggaccgccgcgtcggcgccggcttcgagatcccggccgcctcgctcaccgtcttcttcgtcggcgccatcatgctcaccctcgccgtctacgaccgcgtcttcatcccgctctgccgcgtactcaccggcaagcaaggcttcaccaacctggagaagatcggcatcggcctcgccctctccatcctcggcatggccgccgccgcgctctgcgagaagaagcgcctcgccgtcgccgtcgccgccaccaccgggaactccacgccgatcagcgtgttcctgctgacgccgcagttcctgctggtgggcgccggcgaggcgttcatctacacggggcagctggacttcttcatcacgaggtcgcccaaggggatgaagacgatgagcacggggctcttcctgacgacgctctcgctcggcttcttcttcagcagcgtgctcgtgtcgctcgtcaagggcgccaccacctggctcggcgacaccatcgaccgcagccgcctcgactacttctactggctcctcgccgtcctcagcgtcctcaacctcgccgcctacctcgtctgcgccaagtgggccgccaccgccgccgccacctcgcgggagcagcagcagcagcacaccgccgtcgccgacgccgacgagaaatgctag</cdnaseq>

Protein Sequence

<aaseq>MVRDAVDYRGCPADRSATGGWVAAALVLGIELCERLSTMGIAVN LVTYLTGTMHLPSAAAANVVTDFMGTSFLLCLLGGFLADSFLGRYLTIAVFALVQSIG TALLAASTLVTHLRPPPGEQPTPVQMAVLYACLYLIALGTGGLKSSVSGFGTDQFDDR DGRERAAMGLFFNRFFFFISLGTLLAVTVLVYVQDHVGRSWAYGICSAAMLAAIAVFL SGTRRYRYKRSSGSPIVHILQVLVAAARKRGVVKRPPTAAELYEDDRPEHARIAHTAQ FPCLDMAAVVAGEEDNEVAGPGGPAAPNPWKLCSVSRVEEVKMVARLMPVWATTILFW TIYAQMITFSVEQATTMDRRVGAGFEIPAASLTVFFVGAIMLTLAVYDRVFIPLCRVL TGKQGFTNLEKIGIGLALSILGMAAAALCEKKRLAVAVAATTGNSTPISVFLLTPQFL LVGAGEAFIYTGQLDFFITRSPKGMKTMSTGLFLTTLSLGFFFSSVLVSLVKGATTWL GDTIDRSRLDYFYWLLAVLSVLNLAAYLVCAKWAATAAATSREQQQQHTAVADADEKC </aaseq>

Gene Sequence

<dnaseqindica>1..1701#atggtgcgggacgcggtggactaccggggatgcccggcggacaggtcggcgacgggggggtgggtggcggcggcgctggtgctggggatcgagctgtgcgagcggctgtcgacgatggggatcgcggtgaacctggtgacgtacctgacgggcaccatgcacctccccagcgccgccgccgccaacgtcgtcaccgacttcatgggcacctccttcctcctctgcctcctcggcggcttcctcgccgactccttcctcggccgctacctcaccatcgccgtcttcgccctcgtccagtccatcggcaccgccctcctcgccgcctccaccctcgtcacccacctccgcccgccgcccggggagcagccgacgccggtgcagatggccgtgctctacgcctgcctctacctcatcgccctcggcaccggcggcctcaagtccagcgtctccggcttcggcaccgaccagttcgacgaccgcgacggccgggagcgcgccgccatgggcctcttcttcaaccgcttcttcttcttcatcagcctcggcacgctgctcgccgtcaccgtgctcgtctacgtccaggaccacgtcggccggagctgggcctacggcatctgctccgccgccatgctcgccgccatcgccgtcttcctctccgggaccaggaggtaccgctacaagcggagctccgggagccccatcgtccacatcctccaggtgctcgtcgccgcggcgcggaagcgcggggtcgtcaagcgcccgcccaccgcggcggagctctacgaggacgaccgccccgagcacgcccggatcgcgcacaccgcgcagttcccgtgcctggacatggcggcggtggtggccggcgaagaggacaacgaggtggccgggccgggcgggccggcggcgcccaacccgtggaagctctgctcggtgtcgcgcgtggaggaggtgaagatggtggcgaggctgatgccggtgtgggcgacgacgatcctcttctggaccatctacgcgcagatgatcaccttctccgtggagcaggccaccaccatggaccgccgcgtcggcgccggcttcgagatcccggccgcctcgctcaccgtcttcttcgtcggcgccatcatgctcaccctcgccgtctacgaccgcgtcttcatcccgctctgccgcgtactcaccggcaagcaaggcttcaccaacctggagaagatcggcatcggcctcgccctctccatcctcggcatggccgccgccgcgctctgcgagaagaagcgcctcgccgtcgccgtcgccgccaccaccgggaactccacgccgatcagcgtgttcctgctgacgccgcagttcctgctggtgggcgccggcgaggcgttcatctacacggggcagctggacttcttcatcacgaggtcgcccaaggggatgaagacgatgagcacggggctcttcctgacgacgctctcgctcggcttcttcttcagcagcgtgctcgtgtcgctcgtcaagggcgccaccacctggctcggcgacaccatcgaccgcagccgcctcgactacttctactggctcctcgccgtcctcagcgtcctcaacctcgccgcctacctcgtctgcgccaagtgggccgccaccgccgccgccacctcgcgggagcagcagcagcagcacaccgccgtcgccgacgccgacgagaaatgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0556700, RefSeq:Os01g0556700