Os01g0558800

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0558800| Description = Conserved hypothetical protein| Version = NM_001049872.1 GI:115437607 GeneID:4324676| Length = 4011 bp| Definition ...")
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Gene Name

Os01g0558800

Description

Conserved hypothetical protein

Version

NM_001049872.1 GI:115437607 GeneID:4324676

Length

4011 bp

Definition

Oryza sativa Japonica Group Os01g0558800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22808474..22812484

Sequence Coding Region

22809030..22809132,22810361..22810432,22811008..22811132,22811360..22811419,22811559..22811637
,22811776..22811861,22811959..22812279

Expression

GEO Profiles:Os01g0558800

Genome Context

<gbrowseImage1> name=NC_008394:22808474..22812484 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22808474..22812484 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcccggcccttctccccggctgcctcgccgcgcccccgcccccgccgccgcttgtcaccaccagcagcaccgcatcccctagcgcgcacctcagaacgctccggctcccctctggccttgcggtatcccgacgcgcgggcttcggggaggccgcgcgtgcagcggccaccgagcgaggcgccatcgaggaggaggaggaggaggaggaggggttcccggagtgggggaacggcgacgaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgaccccaacaaagcccagtctcgcatggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcacccaaccccatgaaggtcgtcttcaacaagtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaagatgtgaccttaatttgcgatgctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaatatgcagctatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaaggagcgaataccacaccaacatccttttacaatattggtgatcttgagattcaagataatatagcacgtgtatgggtagacattggtattcacgaaccgttgcttttggacatcctgcttaatgcattaacgaccataaattcagatcatgtgggcattaagcaagtgcagtttggagggagtgaatttcagaactggagcgaggacttgaaaacggaagaagctggatatagtgtccacaaaatttag</cdnaseq>

Protein Sequence

<aaseq>MLPALLPGCLAAPPPPPPLVTTSSTASPSAHLRTLRLPSGLAVS RRAGFGEAARAAATERGAIEEEEEEEEGFPEWGNGDEDEYDHDPEIGDIMGEYFDDPN KAQSRMEERIKKKRHKIVQAKTGSPNPMKVVFNKFDFSNSYIWFEFYHALLPKDVTLI CDALRSWHIVGRLGGCNSMNMQLSQLPLDCQRPTYDALEGANTTPTSFYNIGDLEIQD NIARVWVDIGIHEPLLLDILLNALTTINSDHVGIKQVQFGGSEFQNWSEDLKTEEAGY SVHKI</aaseq>

Gene Sequence

<dnaseqindica>3353..3455#2053..2124#1353..1477#1066..1125#848..926#624..709#206..526#tcgctccacgccgttccgtttcctcatccaaactacacgcactacctcaacgccgacgacgactcaccccggccgggtttcgtctcgccggcggcggcgcgaggcccgcgagctcgagctcgagctcggcagcggaagcttcgggtagtagtagcagcggccgttaagacttctctcctgccgccggcagcggcacacagcggagatgctcccggcccttctccccggctgcctcgccgcgcccccgcccccgccgccgcttgtcaccaccagcagcaccgcatcccctagcgcgcacctcagaacgctccggctcccctctggccttgcggtatcccgacgcgcgggcttcggggaggccgcgcgtgcagcggccaccgagcgaggcgccatcgaggaggaggaggaggaggaggaggggttcccggagtgggggaacggcgacgaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgaccccaacaaagcccagtctcgcgtgagtgcccgcctgctcttttgcccctccttaccctttactctttgcccttcttcatctgaaatctgggaaaatcttccgatttttgggtttgcagatggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcacccaaccccatgaaggtcgtcttcaacaagtaatgctgctctcgccgatggcatgtatagaatatagtgatgcaattagttagctagaaatacagtattttagctgacagtatttgggagtctccccttgattgtgtaattaacttgtggttgttgcctggcgctaggtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaagatgtgaccttaatttgcgatgtaagttgtttttcttccctgctggaagatagtatgcgacatgcttttcaaaaacaagtatgaatattgaatcagatatattcagaaatttagtcgcgatacctcaattttcttctatttctctttattgtgtttgtaggctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaatatgcaggtaaacttatgtggctcccagcatattaattcgtagtgttcattcctatagttgtcaatagcaaacacaaacagaatatagcagctagcctctgtctttctcttacatattgtggtaattttagtactttgagggggaactagaggatttccttctggaaaaagtacttcgaatggacttttatatatttttttaaatagaattaaaaacatctgtttctcttacagctatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaaggagcgaataccacaccaacatccttttacaatattggtgatcttgagattcaagataatatagcacgtgtatggtatgtactcttacccttttggccctcttttactttcaataacatgcaaggtagcacaagcttattgaacatgagcaacggtaccagctcccctttaatgatttataccactgggtctcacatcattcttgattgctatcattattatcaactttctgtatatgcaagtttatgcaaaagaaaaccatgagatgcagatagagcattataatttatcaacacaaaaccgtgtgatctgtgatttagtagttgtgatagtgatacactagctgttgtgacttctgacaaggactaaaaagttgacaattactaccattcaacacagtatttatggaaacctatgattttctatagggtagtaacactttctatattattataccaatataactttatacagtatctagtggaacactggtactgattatgctcgggttcttttggttttggcgcatgtgtcaataatcttctagttttccttcaagtagagagcattgtacataatatacttggtcaagttaaatctcattgaaatcgaccatgactctttactttcatcttattgttttcaacagggtagacattggtattcacgaaccgttgcttttggacatcctgcttaatgcattaacgaccataaattcagagtaagaacctgaaacttcagattgtcaggattttgtcaccaaacacatggagatgtaatttcaagttgccaggatcaggttgctaggatggtggagttggatacttagatatgctttatattatgcgtttttccctgtcttgatgtttggagcgcctcgtaatggtggtgtccgagttactaaacggtgtatgttgaactaattgaaatggagcaaacggcaatagtttttacctcgttacctaggagtacagggccaatgcatgatttgcctcaatattccacattggcatttacattgttctatgatggatttacattttcatttattgaaatggaacaactgcaatttatgttttgcagagaaggctttagccatggtatggttgttcttaaattaccttgagcaaccattcagtttattttagaaaaaaaaaactaatttgaagttatgttgcataggttctgcaacactgaatcaacttttcttcgatgttattttctgttcattctggatttaattttagataatggaagataagccctccagcctctgaattaaagatgcacacagtcacctcattatgggcttctatcagtgtgttttgcactgcctgaaagtaatacttatgggtgctatactgaattgatgaatgaaacaactataatacaccacttcacagtgtattctgtattaattgatttttttcgccaataatatggcgctcatgatggtatcatcttactaaagaagtggttgtttaaagtcttgttttgtcttcactcctctgatactaaaatcaatccacctaactgttagatccaaaattgttctaccgtaactaattcttttagataatggaaaagctattgcataataactaattatttggatactgatcttgatggagtgtaggattgaaatgagtggatgcaatccatgtacgataggcatttagcatttgctagtcctgcacttgtctgaagcgtgtgtcactagtggaagaaatatgtttgtaatctccatgacatgataatcgatatttcattcaggaagggaatctaaattgaagtaaaaccacattctattgttacatctttttagttggggattatttttcccagaatcacactgtttcctttctgaatctctactttaaaaagcgtatatttttgtattcacttattgaacaatacaatctcatttaatttttgtttcgtttctgcagtcatgtgggcattaagcaagtgcagtttggagggagtgaatttcagaactggagcgaggacttgaaaacggaagaagctggatatagtgtccacaaaatttagaaagcctagtcctattatagcagaagcagccgctatcctgctgaggtgctgatatagtgctatagcacggatccaatgtagcttcctgaatcatccacctcacaagggcttcaaccgctatgatcttgcagttctaactgagaagaaaagcgacgacaccatccttaagcctgaaaagtttgttgccattttcctgcaaagaacctttgcttggaaaaggttgcctattattatgcaaagaagccagcccatcaagatgcaaatagatcctaagatgagtgaaggtgcgcatgatttcttcaatctcatctacttggaatataggcaacaaagtacggtgattgataagatataatggcttagtggtgcacgagtcactcacagaccctgattgaacaatatgaaaagccagccagccttgtgaagttgtgagactcaactcaatgaagcagcatatgtgtttattattaaactatttaagcaagggttaatttggagagttgttacagaaattttgcttcgattaatcaagacttcaagagagttcagaagtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0558800, RefSeq:Os01g0558800