Os01g0559300

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0559300| Description = Conserved hypothetical protein| Version = NM_001049877.1 GI:115437627 GeneID:4324681| Length = 2475 bp| Definition ...")
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Gene Name

Os01g0559300

Description

Conserved hypothetical protein

Version

NM_001049877.1 GI:115437627 GeneID:4324681

Length

2475 bp

Definition

Oryza sativa Japonica Group Os01g0559300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22841795..22844269

Sequence Coding Region

22841849..22841957,22842041..22842102,22842240..22842323,22842804..22842858,22843578..22843704
,22843864..22843914,22844010..22844109

Expression

GEO Profiles:Os01g0559300

Genome Context

<gbrowseImage1> name=NC_008394:22841795..22844269 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22841795..22844269 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacgacgacgacggcggcgacgaggaggtggtggaagcgccgcggcggcggcggcggcgacggcgcggaagacggcgacgacctcatcccgatggacatccaagaccaggaggagatggtccggtcgctggagcagaagcaggcgcagcagagccgccggtggaggcgcgtcttcgccgggttcctcctcggctacgcggccttcctcgtctactccggctttcaccatgcggcggccccgtgggaactgcggtatcatgcttatttcatggaagatttgtcatcaccgatggtcgtagttgcagattggatagctgccctagcatgtttattctcaattaaaggattacttcactcctggaagaagtggatgtggtattcattctatgtcagcatactagtagccctcttctggacatactacctcttgaggttaccgagaattcgatgggatgtagcatggctcccgtttggccctttgattgcttctgcattgagcctctatgtggaccactctatgctggagtcaatgcaagatatcaacaccttgaggagctacatgtataactacaaggccttgtag</cdnaseq>

Protein Sequence

<aaseq>MTTTTTAATRRWWKRRGGGGGDGAEDGDDLIPMDIQDQEEMVRS LEQKQAQQSRRWRRVFAGFLLGYAAFLVYSGFHHAAAPWELRYHAYFMEDLSSPMVVV ADWIAALACLFSIKGLLHSWKKWMWYSFYVSILVALFWTYYLLRLPRIRWDVAWLPFG PLIASALSLYVDHSMLESMQDINTLRSYMYNYKAL</aaseq>

Gene Sequence

<dnaseqindica>55..163#247..308#446..529#1010..1064#1784..1910#2070..2120#2216..2315#aaaaatcacattccaaatcagaaacctcggacctccaacccaggatcggagcggatgacgacgacgacgacggcggcgacgaggaggtggtggaagcgccgcggcggcggcggcggcgacggcgcggaagacggcgacgacctcatcccgatggacatccaaggtgtgcaccatctcacgcgcgcgccgttctccttccccaaccctctctcgttgtcatcacccccgttcgtggactgcgcgcagaccaggaggagatggtccggtcgctggagcagaagcaggcgcagcagagccgccggtggagggtgcgcgcccactgccgatccccgatctcgttcggcttagggttttgtttcgtcgattcgattcggtttggtggtcctccctgctcacgcccggacccggccatggcctgttgttccctttgtgttgtgttgtgcagcgcgtcttcgccgggttcctcctcggctacgcggccttcctcgtctactccggctttcaccatgcggcggccccgtgggaactggttggtttacttactgtccgtcacccccattccccatttcatggcgctttgcttagacatcacttggttgagctcattgttattgcttgatattgattggcataagattcggaattggcatatggtagcacacatgccgtagttcggttgcgttggattagttacaaaattgtttccttgaggattgccaatttaccagcagttgaaaaataaggggggaggggggagggggggggggggtccttcatatgcatgtgaatgcatttatttatatccatgtgtcatacattgctggataatgtatttcagcgatgcctgaattctgcgacattcagcactacaactctaactattacaccttcacaactggtgctatctgctataccatgtattaatgattttctttgtaatgactgtctagcgattgcattgcgctgtgcttctgtcatgttgtttgacacatgcttctctaatgtacagcggtatcatgcttatttcatggaagatttgtcatcaccgatggtcgtagttgcaggtaattatgcttacatcatatttgcattgcacacaataaatgaaccagaggttctctctgttacaaaagtaaaaaaaaaatagagagagagggtggaagttttagatacaagtacagataatgaaatgtctacatgttacttggattgaaatagctgatggcactgagccagctgtgtctttcttatttgctcaagttagcaacttcaaatgcaagtttgcctttgctatatttttttgcactttggaccaccccaactctcttctcttctcatgtctaaccactcctatggcaaaaatatgccttgtgcatgggtgagagttcattggcacgttggagccaaaacgctcgaggtcgttgatgtgctgaaaagataagtttggggtggtccaaattgcaacaaaggcaatgcgcaaactacaatttgctcttgtttgttttatcatactattttcttttccaatgacttagcagtctgcaaacattttctactcggagttttagggaacatgtcacttatagcatgatagtattacacaagatgcatttattgatcctgttggttaatcatcatctaaactcattccctctgtaattcttgttttactttataccaaaacaaataaaagaatgtggaacttacaggcataaaatttgtcctgctaaatcaaaattacttcccttgtgatatgattaataccttaccttgaatattgcagattggatagctgccctagcatgtttattctcaattaaaggattacttcactcctggaagaagtggatgtggtattcattctatgtcagcatactagtagccctcttctggacatactacctcttgaggtatcacattatctactagtaactatttgctttgtgcattgttattaccattttatgataatggtcttttatgcatgaccacataaacagtactaaccaaccatcaacggctagaacttgtaatttgattggttgattggttttactcttgtgctacaggttaccgagaattcgatgggatgtagcatggctcccgtttggccctttgatgtatgctttcttgcttccttctatctgtttttcacagaccaagaggatcatttcttgttaataacattgttcgttttatctatattgttgggcagtgcttctgcattgagcctctatgtggaccactctatgctggagtcaatgcaagatatcaacaccttgaggagctacatgtataactacaaggccttgtagtgtggagaatatggctagttgtatctatacatgtaataggtttgcacttttcattaactcccggtatagcttagagttcatctacttctagtttactgctaaacaatggagattcacaggtttcatctttgaatggaattattttggttaatgtagcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0559300, RefSeq:Os01g0559300