Os01g0566100

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0566100| Description = Conserved hypothetical protein| Version = NM_001049896.1 GI:115437705 GeneID:4327931| Length = 3128 bp| Definition ...")
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Gene Name

Os01g0566100

Description

Conserved hypothetical protein

Version

NM_001049896.1 GI:115437705 GeneID:4327931

Length

3128 bp

Definition

Oryza sativa Japonica Group Os01g0566100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23296777..23299904

Sequence Coding Region

23297080..23298024,23299472..23299717

Expression

GEO Profiles:Os01g0566100

Genome Context

<gbrowseImage1> name=NC_008394:23296777..23299904 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23296777..23299904 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggggaggaggaggaggagggaaggaggtggaggagagggggaaggtgatgggcccgctgttcccgcggctccacgtcaacgacgccgccaagggcggcggcccgcgggcgccgcccaggaacaagatggcgctctacgagcagttcaccgtgccgtcccaccgcttcagcggcggaggcggcgcgctcgcctcggctcggggcagcctggcgcgctcgacgtcggcggcgagccagagccaggtatatggatgtgacatgcctctttttgagccgttcaatgtgccttccaatggacctggccagtctgttgaaaagatgaattcaaattctgtcaacagacagattaatggttcaagaaaagattcggggatgttatccactcagcctaagggcattgataaatatggttcaggatcaagggctgagtgtgccccacagcaaagggtggaaaagggcataaagagttcttcgggaaggaaattggctgatgatgatgaattcattgtaccttctgttttcagtgccagatttcctcaatattctactaaagagcgtgcgggggttcaagaggaatcaacaccccttgttgctctcagtccgcacaaaagccctccagcagtgtccaaatcaccgacaaagtgttataacactgttagtaagaacttggagagaatcaatgtttctgatgtgaaatcaaggggttctcagaaagacaaggagacaggaccagcacaaacattgaaaaatgtggaagttgaacatttttcatcatttgaggcatccaaagatatgtttggaagcaaacatgctaaagtatgtcctaagacaggcactataaatgatttggatgagccacatttggaaaacagcgagcatcaagcgacaagtagaaacgggagttccgtgaaatttcagaaccctccagtgagaagaaatacaatatccgctaaaccatctcctggtattgaaaataccaatgggcattgtaatttacctcaaggaggcttaaaggaagctggtacaaagagaaaaaggttggaagcacaggataatgcagagaaaattgatgatttgtctgattcctcagtggagtgtataactgcttgggagatttctccagatgaaattgttggtgccattggtgcaaagcatttttggaaagcaaggcgggctatcataaagtaa</cdnaseq>

Protein Sequence

<aaseq>MRGGGGGGKEVEERGKVMGPLFPRLHVNDAAKGGGPRAPPRNKM ALYEQFTVPSHRFSGGGGALASARGSLARSTSAASQSQVYGCDMPLFEPFNVPSNGPG QSVEKMNSNSVNRQINGSRKDSGMLSTQPKGIDKYGSGSRAECAPQQRVEKGIKSSSG RKLADDDEFIVPSVFSARFPQYSTKERAGVQEESTPLVALSPHKSPPAVSKSPTKCYN TVSKNLERINVSDVKSRGSQKDKETGPAQTLKNVEVEHFSSFEASKDMFGSKHAKVCP KTGTINDLDEPHLENSEHQATSRNGSSVKFQNPPVRRNTISAKPSPGIENTNGHCNLP QGGLKEAGTKRKRLEAQDNAEKIDDLSDSSVECITAWEISPDEIVGAIGAKHFWKARR AIIK</aaseq>

Gene Sequence

<dnaseqindica>1881..2825#188..433#cttcgccttccattccatggccaccacagacaccgccccccgcctcgcgctcctcctccgccccgccatggcctgacctgacctcccccacaacctgcggcctacgaatcgatcgggagagggggttctccttcctttcctcgacctgctgctggtgggttggtggtttctgcggggggaggcggcgatgaggggaggaggaggaggagggaaggaggtggaggagagggggaaggtgatgggcccgctgttcccgcggctccacgtcaacgacgccgccaagggcggcggcccgcgggcgccgcccaggaacaagatggcgctctacgagcagttcaccgtgccgtcccaccgcttcagcggcggaggcggcgcgctcgcctcggctcggggcagcctggcgcgctcgacgtcggcggcgagccagagccaggtgagggggtctgcgcttgtgctcgattgttgtggggttgtgactagtgaatcggatagaattaaagctaggaagatgatttcgaggcacaaatgacatcttatcatcttccttccgttgcgtgcgtattcaattcatgtgccgattcacatgccgtcagtatgtagtaatacctctctatatgtagtcatagaccgattagcatatgcttgtgcacttccataattgagcctcttcctccatggctaacaacccatttgatgtgcactttgctcacatgtttggcatcccttcttgtaaaatcgtgtgctgactccgctgtttgtaaaagtatactaatcgggcaactgtccgtctaagaatgttattcatgcgagttcttcaatgttgaagtacaattgaattgtctacctttccacattagcttaaactttcgggtgaactaacaggtggccaggtgcatgcgactcgacatggtatcaaagccaagaggtctcaagtttgtatcttggcttgttgaattattttcaaaataaaaatcacagtccagttctattccacttctgaaacctggagagagcgtagggtcaaattataattgaattggctctcatttctcatcagctgcttttgggtgaactggcagttaacgcaactcaatacccagagttctttcttatattaggatcgcctggccaattatcacgtattaggagttattgtttaggaaattcttcttcgcaagcttttatttcggaacatttcaattctatggctgggattggaaaacatcaggacaatgtttctagtttcaaccaattgtgtgctgaggagatgccaactcagcttaactgctactattggatattatagtctattgcgaattgctattactagatttggtaaaagttgtgtttgctgaggtctggtgtttgtaatatacggttgacaggtaaactggaatgatcaaaagttactttgttatgatgttcaaagcatatgtgataaatatcgattattgactattatcatcttctttgagtttgtatgaggggaaaactacactggaggacaatcctgtaatatcttcctacaagaaatcaattaattttctataattgggtagttgtagacatgaagtacctgtacctgtggcaaatgtcccaagtcatagcttgaagtaacttagtattcctttaaaaaaaataaactcgatgaagggggaaggacgacccttcacttagctttaaagaaggggccacctaaaccttatgaggggggggggggggggggcagttgggcacaaatgcggcacctaggattcgagcccagggtgggcggcgcctgtaacgagtgctctaccactgaactgcatgctcattcacgcttcgtattccaattatatatattcaataaatgaagtactgaaacaaatttctgcttccaggtatatggatgtgacatgcctctttttgagccgttcaatgtgccttccaatggacctggccagtctgttgaaaagatgaattcaaattctgtcaacagacagattaatggttcaagaaaagattcggggatgttatccactcagcctaagggcattgataaatatggttcaggatcaagggctgagtgtgccccacagcaaagggtggaaaagggcataaagagttcttcgggaaggaaattggctgatgatgatgaattcattgtaccttctgttttcagtgccagatttcctcaatattctactaaagagcgtgcgggggttcaagaggaatcaacaccccttgttgctctcagtccgcacaaaagccctccagcagtgtccaaatcaccgacaaagtgttataacactgttagtaagaacttggagagaatcaatgtttctgatgtgaaatcaaggggttctcagaaagacaaggagacaggaccagcacaaacattgaaaaatgtggaagttgaacatttttcatcatttgaggcatccaaagatatgtttggaagcaaacatgctaaagtatgtcctaagacaggcactataaatgatttggatgagccacatttggaaaacagcgagcatcaagcgacaagtagaaacgggagttccgtgaaatttcagaaccctccagtgagaagaaatacaatatccgctaaaccatctcctggtattgaaaataccaatgggcattgtaatttacctcaaggaggcttaaaggaagctggtacaaagagaaaaaggttggaagcacaggataatgcagagaaaattgatgatttgtctgattcctcagtggagtgtataactgcttgggagatttctccagatgaaattgttggtgccattggtgcaaagcatttttggaaagcaaggcgggctatcataaagtaagtgtactacactagaataatttgattgtattaagtatatcattgatgaaagcaaaatataatgatatactgattcttctatagtaagtatagggctgcaagaatagctgtaggctactaggctcatgagctgctcaatcaacttgctttttacctcaactcaagatcaactaaaatacaaatgagatgagtttgggtgtattttgtagtttgactgtaaaagatgagtgtgagtcgaggtcatatctttctagccttgtttctgcaaacatgtagatttcagataactaacttaaactatcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0566100, RefSeq:Os01g0566100