Os01g0567500

From RiceWiki
Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0567500| Description = Similar to Monosaccharide transporter 3| Version = NM_001049904.1 GI:115437737 GeneID:4326342| Length = 2158 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0567500

Description

Similar to Monosaccharide transporter 3

Version

NM_001049904.1 GI:115437737 GeneID:4326342

Length

2158 bp

Definition

Oryza sativa Japonica Group Os01g0567500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23376706..23378863

Sequence Coding Region

23376791..23376926,23377010..23377332,23377624..23378253,23378337..23378789

Expression

GEO Profiles:Os01g0567500

Genome Context

<gbrowseImage1> name=NC_008394:23376706..23378863 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23376706..23378863 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcggcgccatgaccgacaccgatggcgctcacaagaactacccggggaagatgaccatcttcgtcttcctcgcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggcggcgtgacgtcgatggactcgttcctgatcaagttcttcccgtcggtgtacgccaaggagaaggagatggtggagacgaaccagtactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctacctcgccgcgctcatcgcctcgctcttcgcttccgtcatcacccgcaagttcggccgcaggatcaccatgctcggcggcggcgtcatcttcctcgtcggcgccatcctcaacggagccgccgccgacgtcgccatgctcatcatcggccgcatcctcctcggcatcggcgtcggcttcagcaaccaggctgtgccactgtacctgtcggagatggcgccggcgaggatgcggggcatgctgaacatcagcttccagctcatgatcaccgtcggcatcctcgccgccaacctcatcaactacttcaccgacaagatcgccggagggtgggggtggcgcgtcagcctcggcctcgccgccgtcccggccgtcatcatggccggcggctccctcttcctccccgacacccccaactcgctcctctcccgcggcaaggagaacgaggcgcgcgccatgctccgccgcatccgtggcaccgacgacgtcggcccggagtacgacgacctcgtcgccgccagcgaggcgtccaaggccatcgagaacccgtggcgcacgctcctcgagcgccggtacaggccgcagctggtgatgtcggtgctgatcccgacgctgcagcagctcaccggcatcaacgtcgtcatgttctacgcgccggtcctcttcaagaccatcggattcggcggcacggcctcgctcatgtccgccgtcatcaccggcctcgtcaacatgttcgccaccttcgtctccatcgccaccgtcgaccgcctcggccgccgcaagctcctccttcagggcggcgtccaaatgatctttgcgcagttcattcttgggacgctgatcgccgtcaagttcgggacggcgggcgtggcgaacatctcgcggggttacgccatcgtggtggtgctgtgcatctgcgtgttcgtgtcggcgttcgcgtggtcgtggggacccctcgggtggctggttcccagcgagatcttcccgctggagatcaggtcggcggcgcagagcgtggtggtggtgttcaacatggccttcaccttcatcatcgcgcagatcttcctgatgatgctgtgccacctcaagttcggcctcttctacttcttcggcgccatggagctcatcatgacggggttcgtcttcttcttcctgccggagacgaaggggattcccatcgaggagatggacaggatctggggtaagcactggtactggagacggttcgtcggcgctggggccggcggcaaggtcgagattacctccacagtatga</cdnaseq>

Protein Sequence

<aaseq>MAGGAMTDTDGAHKNYPGKMTIFVFLACLVASSGGLIFGYDIGI SGGVTSMDSFLIKFFPSVYAKEKEMVETNQYCKFDSELLTLFTSSLYLAALIASLFAS VITRKFGRRITMLGGGVIFLVGAILNGAAADVAMLIIGRILLGIGVGFSNQAVPLYLS EMAPARMRGMLNISFQLMITVGILAANLINYFTDKIAGGWGWRVSLGLAAVPAVIMAG GSLFLPDTPNSLLSRGKENEARAMLRRIRGTDDVGPEYDDLVAASEASKAIENPWRTL LERRYRPQLVMSVLIPTLQQLTGINVVMFYAPVLFKTIGFGGTASLMSAVITGLVNMF ATFVSIATVDRLGRRKLLLQGGVQMIFAQFILGTLIAVKFGTAGVANISRGYAIVVVL CICVFVSAFAWSWGPLGWLVPSEIFPLEIRSAAQSVVVVFNMAFTFIIAQIFLMMLCH LKFGLFYFFGAMELIMTGFVFFFLPETKGIPIEEMDRIWGKHWYWRRFVGAGAGGKVE ITSTV</aaseq>

Gene Sequence

<dnaseqindica>86..221#305..627#919..1548#1632..2084#gactggtgagtactgatcgtagtccagccttgttctcctctctctctctctctcctcactcctcgcacacttcggaattcccatcatggccggcggcgccatgaccgacaccgatggcgctcacaagaactacccggggaagatgaccatcttcgtcttcctcgcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggtaacatttgagacaccgaaaacgagaaagtctatggatcgatcgatcgatcgtttgatggattgcgtgaattttctttgcaggcggcgtgacgtcgatggactcgttcctgatcaagttcttcccgtcggtgtacgccaaggagaaggagatggtggagacgaaccagtactgcaagttcgacagcgagctgctcaccctcttcacctcgtcgctctacctcgccgcgctcatcgcctcgctcttcgcttccgtcatcacccgcaagttcggccgcaggatcaccatgctcggcggcggcgtcatcttcctcgtcggcgccatcctcaacggagccgccgccgacgtcgccatgctcatcatcggccgcatcctcctcggcatcggcgtcggcttcagcaaccaggtcatccacgtcgtacccaatctctccaattctgcatttggtctaaaaaaaaaggcatatcatgcacgcaattcaagttttggataacgatgcatgcgtgcgcgaaaattgttaaaagaattcatttgaaaatggcatgaaactaaatccggattgagcgttaaacgatctgcatgaccggatcttacggataacttgcatgcacgcttcatgcaaattacagtagtacactgcacactcctcggagttaatttcgttcgaatgtgacgtgacaaccatggctatgtgcaggctgtgccactgtacctgtcggagatggcgccggcgaggatgcggggcatgctgaacatcagcttccagctcatgatcaccgtcggcatcctcgccgccaacctcatcaactacttcaccgacaagatcgccggagggtgggggtggcgcgtcagcctcggcctcgccgccgtcccggccgtcatcatggccggcggctccctcttcctccccgacacccccaactcgctcctctcccgcggcaaggagaacgaggcgcgcgccatgctccgccgcatccgtggcaccgacgacgtcggcccggagtacgacgacctcgtcgccgccagcgaggcgtccaaggccatcgagaacccgtggcgcacgctcctcgagcgccggtacaggccgcagctggtgatgtcggtgctgatcccgacgctgcagcagctcaccggcatcaacgtcgtcatgttctacgcgccggtcctcttcaagaccatcggattcggcggcacggcctcgctcatgtccgccgtcatcaccggcctcgtcaacatgttcgccaccttcgtctccatcgccaccgtcgaccgcctcggccgccgcaagctcctccttcagggcggcgtccaaatgatctttgcgcaggtacgtacacacaaaatccattgatcaattcgatcagatacattattaaacgcacataattcggatgatttttgcatggacagttcattcttgggacgctgatcgccgtcaagttcgggacggcgggcgtggcgaacatctcgcggggttacgccatcgtggtggtgctgtgcatctgcgtgttcgtgtcggcgttcgcgtggtcgtggggacccctcgggtggctggttcccagcgagatcttcccgctggagatcaggtcggcggcgcagagcgtggtggtggtgttcaacatggccttcaccttcatcatcgcgcagatcttcctgatgatgctgtgccacctcaagttcggcctcttctacttcttcggcgccatggagctcatcatgacggggttcgtcttcttcttcctgccggagacgaaggggattcccatcgaggagatggacaggatctggggtaagcactggtactggagacggttcgtcggcgctggggccggcggcaaggtcgagattacctccacagtatgacattcgtgccgtaaacgtttatctttcaatttgttttcggattacgtaattgaatctgctggctacatcgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0567500, RefSeq:Os01g0567500