Os01g0569200

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0569200| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001049906.2 GI:297597042 GeneID:4326344| ...")
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Gene Name

Os01g0569200

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001049906.2 GI:297597042 GeneID:4326344

Length

3105 bp

Definition

Oryza sativa Japonica Group Os01g0569200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23471641..23474745

Sequence Coding Region

23471641..23472566,23472610..23473207,23473971..23474081,23474602..23474745

Expression

GEO Profiles:Os01g0569200

Genome Context

<gbrowseImage1> name=NC_008394:23471641..23474745 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23471641..23474745 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccaggacccatgctggccgatccaacacttatggtgagggcggatcaacgaggaccaccccacatggtattggtggaccgctacgttgcactcgtggacgacatacaagaggtgatcgacgaaataggaggtgtgtcgttcgatgtgagcttgaaggcagccctcgacgccctcccgaagtgcagcgacggacaagagtgggacgaacaacaacagtccgccatcagggcagagatcacacggcaccgggccgaggtcctggagccggcgttcgccatcttccgagaccgtaaagcctgccgccctgcagcgcctggcacgatgcgtaaggagcccatggcctcccggtgcaactccggctcctactaccgtgaggtactggacggcatcgaccctcgcttttctcacctcaccggcggtgccatcgtgaattctctgaccattggggtctcctggccacccagccatgacctatggaatcaccccttgtccgcctccatctccagctgccatgactgcttgcttgtgctctactttggcaactaccgtcccgggatctcttcgccagggtgttactttgtgctcaacacctgggccaactcggtcgctatcgtcccgcctctgcgcgccacctgcgtcatcaccatgtcgcactgcggcattgggaccggggtcgccatcctacgccataacgactactacgactatgtcctcgttgagctcttcccccatcaggacagccggacccacctcgcctccaacaaagccactcttttcttgtggtggtctcctagctctagcccgctcgccgatggccagtggatacggaaagaggtgctgctccccatccctgcaacttccaatcaagataaggacgacgcgacacggccgcccacctactcctttcgtgaaaacatggtgacaggaatcttggtttgcgatattgacaagctcaacaccagcactgacgacgaggatgatcgcttgttgttccgcttcatcccattgcctgaggaatgcgtgatgaagcctggccttctatctcgggagaggccagcggaggagcaccgcaccatgatctgtatggacccggagaccatcctgttcgtctccatggatagctacatccaaggcctccccattggcgatacagtgctcatgacatggactctcaagttcccactcacgaaccactggacctgggagaagcactctgcgccatccttgtgcgtgggagacctcctaaatgatcttccagtcttaaaagaatccaagaatgacgggaagacgcagcacattgccaactgcccggttagtagcattgacaggcaaaaccatcttatcactagcctcactattaccaagtatgagaggaagcatgagaacgggcaatggggagtcgtggaattgtacgaggtcagcattgacatggaccgtagaacggtcttggagttgtcttctctcgaaagtcgccattcaaatatatttgcagctgactttagttgctgcttacaacagacaatgtcgtgggaaagcttacagcggagtcgctcaacattgaagtcgcctaacgaggaagaagtggttgataaggatgatgaatattgggagtgggtgttccccgatgaagtggggttggaatttactacgctgaacaacatctgcctgaccggatgcatgccggagatacgcctgcacctgcctgacctgagcttgttcggcgacttcatcattagcctggctcagatgcacgaaatgggtggccggagctaa</cdnaseq>

Protein Sequence

<aaseq>MDPGPMLADPTLMVRADQRGPPHMVLVDRYVALVDDIQEVIDEI GGVSFDVSLKAALDALPKCSDGQEWDEQQQSAIRAEITRHRAEVLEPAFAIFRDRKAC RPAAPGTMRKEPMASRCNSGSYYREVLDGIDPRFSHLTGGAIVNSLTIGVSWPPSHDL WNHPLSASISSCHDCLLVLYFGNYRPGISSPGCYFVLNTWANSVAIVPPLRATCVITM SHCGIGTGVAILRHNDYYDYVLVELFPHQDSRTHLASNKATLFLWWSPSSSPLADGQW IRKEVLLPIPATSNQDKDDATRPPTYSFRENMVTGILVCDIDKLNTSTDDEDDRLLFR FIPLPEECVMKPGLLSRERPAEEHRTMICMDPETILFVSMDSYIQGLPIGDTVLMTWT LKFPLTNHWTWEKHSAPSLCVGDLLNDLPVLKESKNDGKTQHIANCPVSSIDRQNHLI TSLTITKYERKHENGQWGVVELYEVSIDMDRRTVLELSSLESRHSNIFAADFSCCLQQ TMSWESLQRSRSTLKSPNEEEVVDKDDEYWEWVFPDEVGLEFTTLNNICLTGCMPEIR LHLPDLSLFGDFIISLAQMHEMGGRS</aaseq>

Gene Sequence

<dnaseqindica>1..926#970..1567#2331..2441#2962..3105#atggatccaggacccatgctggccgatccaacacttatggtgagggcggatcaacgaggaccaccccacatggtattggtggaccgctacgttgcactcgtggacgacatacaagaggtgatcgacgaaataggaggtgtgtcgttcgatgtgagcttgaaggcagccctcgacgccctcccgaagtgcagcgacggacaagagtgggacgaacaacaacagtccgccatcagggcagagatcacacggcaccgggccgaggtcctggagccggcgttcgccatcttccgagaccgtaaagcctgccgccctgcagcgcctggcacgatgcgtaaggagcccatggcctcccggtgcaactccggctcctactaccgtgaggtactggacggcatcgaccctcgcttttctcacctcaccggcggtgccatcgtgaattctctgaccattggggtctcctggccacccagccatgacctatggaatcaccccttgtccgcctccatctccagctgccatgactgcttgcttgtgctctactttggcaactaccgtcccgggatctcttcgccagggtgttactttgtgctcaacacctgggccaactcggtcgctatcgtcccgcctctgcgcgccacctgcgtcatcaccatgtcgcactgcggcattgggaccggggtcgccatcctacgccataacgactactacgactatgtcctcgttgagctcttcccccatcaggacagccggacccacctcgcctccaacaaagccactcttttcttgtggtggtctcctagctctagcccgctcgccgatggccagtggatacggaaagaggtgctgctccccatccctgcaacttccaatcaagataaggacgacgcgacacggccgcccacctactcctttcgtgaaaacatggtgttcgctgtttcgaccacctcgcttttgctgggttgatcttaggacaggaatcttggtttgcgatattgacaagctcaacaccagcactgacgacgaggatgatcgcttgttgttccgcttcatcccattgcctgaggaatgcgtgatgaagcctggccttctatctcgggagaggccagcggaggagcaccgcaccatgatctgtatggacccggagaccatcctgttcgtctccatggatagctacatccaaggcctccccattggcgatacagtgctcatgacatggactctcaagttcccactcacgaaccactggacctgggagaagcactctgcgccatccttgtgcgtgggagacctcctaaatgatcttccagtcttaaaagaatccaagaatgacgggaagacgcagcacattgccaactgcccggttagtagcattgacaggcaaaaccatcttatcactagcctcactattaccaagtatgagaggaagcatgagaacgggcaatggggagtcgtggaattgtacgaggtcagcattgacatggaccgtagaacggtcttggagttgtcttctctcgaaagtcgccattcaaatatatttgcagctgactttagttgctgcttacaacaggtacccctctttgatatgtccatttaaagtgtatattattttgatacgggcaactcttggaaagtaaatttagcctttaatttctcttacattgtattgttggttggtagaaaatcatcattgtggaagcactttgaaaaaaaaatgataatggtactatgtaagcatgcttataatttgcttacgaagtttacattttcaaactgaacacgactcgtaaaagtggacaggcggtggacaggtcccgaatttcttgtactgctgtagttcactagttaaaagtttgatgtttgatctaaattagacaaatttgttgaactacttgctaatggggaaaaaccaaccggtgcagtgagcatagaactaggaaaatttgtcctcgatttgaaaatgttggtgatgggaatgatgaaagcatatccacagttcatctgcttggacgaccaatattttcgattagtagttcttctactcaaaattaatattaggagtaatattttatcaatctgatctattagtttgtgcgggtatagtaaatttaaattcctaaacatcaaatgagaagccgagccttaaaattaaagagcaccacagatttgctggcacaattaataagcaaacacctctttttttgtgttttctttagcatcagggtgatctccacatcgtcgaccgcattaacagtttgatcttccccttttttccccttctatttctgatattgcccgaactttttctcttttatgaattttctttcttcgagacaatgtcgtgggaaagcttacagcggagtcgctcaacattgaagtcgcctaacgaggaagaagtggttgataaggatgatgaatattgggagtgggtgttccccgatgaagtgggtgaggatgaatatcaacatggcccagacctgtcatgttaattttgcgccaagatggaatcagaatatcaactctttatggttagaacttggaactttcaaaaggtagtgggtttgaaatgtgcgccggattatcttgagatctaggtttattatattagttatgttacaaggaaatcccctcttttgtgaggaggaaactctctatctcgagaacttttcttttcctttttttacataaaaattttgtacagaaacaagtctgtcatctcagctaataaaaaaaagatattgaaaatgaagtgagtttcaagtggattttaattgaagaacggtacttttcaaataaccgccaaaacatgtttagtccctgtattagtaggtcagatcagtatttcataaattatccgttaaaatctactatgtcaaagctccagccatctttaaaagtttatgattcaagttgtcagcctaccccaggtgggttggaatttaaaacctgtttggttaaaaccaggtggggttggaatttactacgctgaacaacatctgcctgaccggatgcatgccggagatacgcctgcacctgcctgacctgagcttgttcggcgacttcatcattagcctggctcagatgcacgaaatgggtggccggagctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0569200, RefSeq:Os01g0569200