Os01g0572100

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0572100| Description = The start codon is not identified.| Version = NM_001049915.2 GI:297597050 GeneID:4326353| Length = 4996 bp| Definit...")
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Gene Name

Os01g0572100

Description

The start codon is not identified.

Version

NM_001049915.2 GI:297597050 GeneID:4326353

Length

4996 bp

Definition

Oryza sativa Japonica Group Os01g0572100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23633430..23638425

Sequence Coding Region

23633431..23633544,23633657..23634226

Expression

GEO Profiles:Os01g0572100

Genome Context

<gbrowseImage1> name=NC_008394:23633430..23638425 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23633430..23638425 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgtttgaaaggagatgattgcccttatgatcatgagttgtcaaagtacccttgccacaattttatggaaaatggaatgtgcatcagaggtgataaatgcaaattttctcatgtgataccaactgcagaaggtccgtccacaccagatgcaaagaaatctaatgcgtcatcagtacctgaaaaagcaaattgccaagagcaaacaagtcgtcagaaaacttcaacagtatacagtggtgaacctgcaacctctgttcctatcaaacatcattccatccttaaaaaccttgctggcatatcaggaaatgctcaaaaggtacctgttcgtataccaaggggtatacagtttcttcctttcaataaagccagaccagattctagcattttgcatcaggatgttgtgtccactgagaagcataagaatccaactggtggtccacatcagaactttggaagacctcaacccgcagacgggaaaaaacttggcaagcacaatggacatagatcagctccactgttggatgaaaaagactcatcaaaacaagctaatctacatccatgttcagaaccaaagaaaaatagtttgcctaccactgctgcagtgcccagctcagtaagcactcagcatgaagtttcagaggcctccaggattttgcaggagttcttgtttggttctggcaattag</cdnaseq>

Protein Sequence

<aaseq>CLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEG PSTPDAKKSNASSVPEKANCQEQTSRQKTSTVYSGEPATSVPIKHHSILKNLAGISGN AQKVPVRIPRGIQFLPFNKARPDSSILHQDVVSTEKHKNPTGGPHQNFGRPQPADGKK LGKHNGHRSAPLLDEKDSSKQANLHPCSEPKKNSLPTTAAVPSSVSTQHEVSEASRIL QEFLFGSGN</aaseq>

Gene Sequence

<dnaseqindica>2..115#228..797#ttgtttgaaaggagatgattgcccttatgatcatgagttgtcaaagtacccttgccacaattttatggaaaatggaatgtgcatcagaggtgataaatgcaaattttctcatgtggtacgtaatttaacaaatcattcactcttatttaattattggtgttatagcctggttaaattttaatattagcaaatgctgtgaattaagcaagctttgcactcgttgtcagataccaactgcagaaggtccgtccacaccagatgcaaagaaatctaatgcgtcatcagtacctgaaaaagcaaattgccaagagcaaacaagtcgtcagaaaacttcaacagtatacagtggtgaacctgcaacctctgttcctatcaaacatcattccatccttaaaaaccttgctggcatatcaggaaatgctcaaaaggtacctgttcgtataccaaggggtatacagtttcttcctttcaataaagccagaccagattctagcattttgcatcaggatgttgtgtccactgagaagcataagaatccaactggtggtccacatcagaactttggaagacctcaacccgcagacgggaaaaaacttggcaagcacaatggacatagatcagctccactgttggatgaaaaagactcatcaaaacaagctaatctacatccatgttcagaaccaaagaaaaatagtttgcctaccactgctgcagtgcccagctcagtaagcactcagcatgaagtttcagaggcctccaggattttgcaggagttcttgtttggttctggcaattagagagaagtatgaatctactactatgcctttgatacctgtagactacatatatgcattggtagttaaataaatgttccttgaattttgcagcatacttggatgttgttcagtgatgaacccgtgcccatgagattgtgcagcattttttgtattccgcacaccagttttattgctgtaactccatcttgcaagttgcaactgctgatgtggtatgtcgaaaagagaacaacattgtctgtggtgttttattgcgctttagttaccaataaatttcattcaggacttattttgcagaacttggggcaaatatttactgtcagattttgaagattggtaactatcaaatgaatgcacttctgttcaatccacaggttagttccatttagtgaatggttttgaagatgtaggcctagtgttgtcataaatgcactccttgagtcagtagtttcatgaaaaagttgacatgattcgtatgattcatgggacacactttatgggcctgttcactttgatgccattttcaaccttaccaaattttggtaaagttacaaaaaaagtggctacatttagtttgctgccaaattttagcaactatataagaaatcctaccaaaattttggcaagttaccaaaattttggcaatggtaaaatttggtaaggttttttttggcatcaaagtgaacaggccctatatgtagtactgggataataaaataaatgtttattctaaactgttccaggtcattgttgatatgcgaacatatatgtcagtactatctgtgactcaatgattgctttttttttcttttctagaagatgattgattagatcgatggttttaacttctctcgtgcttagctattaggaattctaggacattgtaacatgcatgttttttggcctgtaaatgtaggccctgttaggatgctacagatttaaagaactactctatgcaatacttccaagtttgttgcatccatgaatacgccagtctttgaatactacatttttcacactgtagcaaaaaccatagtttcttgttttggcaactgcagtatttaccacattactgttttttttttcaaaaaagaattgtttggctagttctatttagatatcttgggtgcatggaattagaagatgggtatgtgaagcatcaacgtgtactgacagatgtctctatgcatagcttttttaactcctatgtatcaatgtaccattgtgtcgtaggctcgtagccctagcttttacacatattaacgatcattagctaattcaatctgtaaacccagatttgctcacatataagagatggatttaaaactaccttacagacagtattataccccaagactttgcaatatttaaaactgctgtggaatcgcttcactttcttggtttacaaaagaaaaggagtccaggagtggaaaaaccatagcgttgagaaaactacagtattttctgttctcaaactaaatactatagtactttttggaaaccactgtattctacgaaaactccaaaactattacatcctcagacagagcccatattttttttcttttggtcttatatttttattagcattgtaccaatggatggcaaattatactataaactttataagtttctaggttaacaatatcaaaaaataattaccctcaaattttttaaaaaagattctacaatactcaattttacacgaatcaatcaacatcgacatatatactatacacgtactaaagttagtattttttagaaatgaaaatacacaaatagcacatggcacacatgcctgcatgtatatagccacaaaaaatattcaagagtgggtgggtgtagaacacgccatcaatacaacttctataagagtacctctttccttctcatgaccagatagtaaagtaggttcaacatgataaaagtaaattgtgattgaatctttttagaactttggtgacaatttctttcccatattgctgctgcttccctgtttttactcgtgcacatactggaagttttctttgttcatatacttttgcgactctatgaattatgatgccagtaacaactgtttattttgtgtgcatgtatttgtctgagttgtggagtgttattttggaggtttatgagttcaagggcagggtcatacattagccggtgcaaagtgcatgtgttcagggccccaaaaattaggggtccccaaataaatctatcattagtactaatcaactatacttaattaccagcaaattacaaggcctaataaatgaaaaaagaaaaaggcccacaaggactaccaggcccaaagactgtatcgttggctcctccattgctgcccacgcgctactcgatggcttggtgtcgcgcaggcatacaacagcaaatcacaattcctaatcttcattagtttgcagcagcaagaagccaacagtgcagcaaaagggagtatgcccgtgtgcatccatcagctcgtgagttcactgtgccatcacatttccctacaatttgttttcttctctaagtttcaaattcatgttataaacaagcaggaaattatttgtttatttcatcagtcctcatcgatcgtgtcttctgaaatgtatgattttggttatgaaataggagtttatttgttcatttcatcaatccatattaagtgaaggtatactttggttctacagtgtttttaaaaatttagggccccagtgttttgcacatgggcttctaattcctaggtggatcgttttgttgcttgttcctctataacataatcaactacgtagtcttcttttacaggttttaagtatgttcctcaataaaggtgactgttgaatacacctagttaccataaaataaaggtcaaaacacaattgtttcaatattattggattaaatgcataataggaaactcaaaaactagtgtgctcttactcttacgttaaatatgcatccaaatatcatgtacacttaaaaactgcaggcttgtaattgtttcatgcaataattgaatgttgaatttatgtgcagatttgaattggaaagttggtgtttatctctttgtttgggattatgaaaatgctaagcgccatatgacttagtaaagcaatggagatttgatgtgtcattcatgtctgtacaagggctgcttttttgaggtaccgctgttgtcgggtggattcattacggtacacatttctttctgttgcgctgtctattgagagatgcttcgccatgaacatgggcattatacaaagcaatttctccatctgctttttttgtcaagcatttagtgtgcttatcagaagtagaaaataaaaggaatattaatctatcaatctctcttttggggggctttcagggcatcaagcttcttgaggcaaaagctttactccattgccatgtgacgatggcagctagaagattgccgttttagtcgtcgaacaacatgatgattttgggttacatctctgccagaaccatgggtccttcacaggacaccagcatcagcctctggtttcatcagtgcaatggtttaagctttacatgcacatagcactctggaatctggattccgtcctatcgtttggttcagaattgcttgtgaaactatccgtggaggccgtggggcacaagtgcagaagataaggggccccagttatgagctggaacgtgtgatcgttgcttgctacatctcaaacatggtttggatctgtccgtgcctagttgctgtcaaaatcccgggtgttgttgcatcggttcagagttacatttcacatgatcgctgggagggctcacatggccgtttcatcagtccgggcttgccatgcgaagcaatcacctgaactacatgtccctctctactgctgctatcacatgcccaagtgacagcgactgtctactatctcactaaacagtcaaatctttttgctcctgatgaaaatgaattgatcttagcaaccgtccgttcattccgatggccttttcattagaggtagttaagatggaactgtcagttttttttttacctggttttaccaccgtatatgagagagtcgtggctgtgttggcttgttatctcggtggtcagttgctcgaatatttgtgtcagtggtgaaagcaaccgactagaaaagacctgaacgacctgtatgcgttgggtgacactggagatggataagcaagttccttggcatgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0572100, RefSeq:Os01g0572100