Os01g0572300

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0572300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001049917.1 GI:115437791 GeneID:4326304| Length = 264...")
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Gene Name

Os01g0572300

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001049917.1 GI:115437791 GeneID:4326304

Length

2648 bp

Definition

Oryza sativa Japonica Group Os01g0572300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23650769..23653416

Sequence Coding Region

23650769..23651127,23652426..23653416

Expression

GEO Profiles:Os01g0572300

Genome Context

<gbrowseImage1> name=NC_008394:23650769..23653416 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23650769..23653416 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaacctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaaggaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccctcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcccactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccaggcgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaaggccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccaccaccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgccgcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccagcatcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtgaagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctgcagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgccaccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctgctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggcgcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgccaccttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggcaacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccggagcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttcctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgcatgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccatggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgagccatggcatggcatgggcagccatagctaa</cdnaseq>

Protein Sequence

<aaseq>MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVR KKVYICPEASCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHS KICGTREYKCDCGTIFSRRDSFITHRAFCDALTEESAKAIGGIPAAMAAPGHHHHHHH HHHQLLFSPPPVMAHHQELAALQEQQQQQHHQDVMQSPHQHQQQQQQRQQLVQQNCGY AVKPEMAPWPTTMPYDHHHPLLQPLCNANAAATAQSSATSAPPTTPQLPAAAAAAHLS ATALLQKAAQMGATIGGAGTGAAGAHYAHMASPAGAGAPAGGSATFGLGLSCLNTHQD GGGGGGNGLIPAGMMGHLARTASHGRSGEDVAGAGGGGGDGMTRDFLGLRAFSHRDIL LAGFDSSCMGHVNAAAGMAGYEPPPPHHGQPQHQHQQQQQQQQGGSNEPWHGMGSHS</aaseq>

Gene Sequence

<dnaseqindica>1..359#1658..2648#atggcgacgaacaggttcgtgtgcgagatctgcgggaaggggttccagagggaccagaacctgcagctgcaccggcgggggcacaacctgccgtggaagctgaagcagcgggggagcaaggaggcggtgaggaagaaggtgtacatctgcccggaggccagctgcgtccaccacgacccctcccgcgccctcggcgacctcaccggcatcaagaagcacttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgccgtccactccgactggaaggcccactccaagatctgcggcacccgcgagtacaagtgcgattgcggcaccatcttctccaggtccttcttcttcctccctcctcctccatcttgcttgcttccatccatccatggcgatcgattgcagcacttgcactcctactgccttctgctcagatatacctgccttggctggcttgccgtgctcctttctcattgccactttgccagtaatccagtgttctcgctgccgcctgcgctttcagttggcacagtgacgagtaggaatcgaagcagcctataagatgagcgtttgttagtgttaacacacctgtaatcatccaataattagggcagcgatagatataccggttgttgattaaccagcaacaaccatgtgcccatccctgccgcgagcatctagccgaaaagatttgtgaacagtggcaactagtacgtagcttagctagctgctcgctgcagcagcgaaacaagcaaagaaaagaagccatatcgatcgatcgacatcgacatcgagatcgagattggagtcgtttcttgcctcttcttctttttgtttcttggcttgtgctgccactgccatccatggctgaaacctcctttggattgatccgggctgatgaatgcgcacggtgcaggacccgatggagacgacgacgacgatgacgacgacgctactagtggtagctaggttggtggtagtactactggcttgtgcgtatgcgcgtgtctgtttgcattgcgtccgtgtgatgagagagagaaatgagagattgggaaacaaacaagcagcaaagctatttgcccataggacaaaggaaggaggggagatctgagcttgatgatgatgagctatggctagctagctgtggtggcagctgatgatgctgagccatggaggaagaaagagaggaggaggaggaagaaagagagacatgtgaatctctttgcagtcgtctgcatcctgctcctgcatggatggatggatggcttttccatctctctctctctccctctctctcccaggctttgcctatgctgttcatcctagccactattcctcctgcctaattgcctactccactctactctgcaagagtgttcatgcatggctatctctctgtgttgtcacttccatggagttcattctagcttgagcatctctctctatcctttttttttttgagatggctataggtgtagtaggagtgtagaagcaacaatgacaagtgagcaagaatacgggggaaatatgatatctttggcttttggccttttgaaatttgatgttttttggttttggtgtgatccgtgtggtttttgatgtgtgtgtctttcggttcttgcattgcatgcaggcgtgacagcttcatcacgcaccgggcgttctgcgacgcgctcaccgaggagagcgccaaggccatcggcggcatccccgccgccatggccgcgccggggcaccaccaccaccaccaccaccaccaccaccagctgctcttctcgccgccgccggtcatggcgcaccaccaggagctcgccgcgctgcaggagcagcagcagcagcagcatcaccaggatgtcatgcagtcgccgcaccagcatcagcagcagcagcagcagcggcagcagctggtgcagcagaactgcgggtacgccgtgaagccggagatggcgccgtggccgacgacgatgccctacgaccaccaccacccgctgctgcagccgctctgcaacgccaacgccgccgccacggcgcagagctcggccacgtccgcgccaccgacgacgccgcagctgcccgccgccgccgccgccgcgcacctgtccgccacggcgctgctgcagaaggcggcgcagatgggcgcgaccatcggcggcgcgggcaccggcgccgcgggcgcgcactacgcccacatggcgtccccggcgggcgcgggcgcgccggccggcggcagcgccaccttcggcctcggcctgtcgtgcctcaacacccaccaggacggcggcggcggcggaggcaacggcctcatcccggccgggatgatgggccacctcgcaagaaccgcctcccacggccggagcggcgaggacgtcgccggcgccggcggcggtggcggcgacggcatgacgagggacttcctcggcctccgcgccttctcccaccgcgacatcctcctcgccggcttcgactcgtcgtgcatgggccacgtgaacgccgccgccggcatggccggctacgagccaccaccaccgcaccatggacagccacagcaccagcaccagcagcagcagcagcaacagcaaggcggcagcaacgagccatggcatggcatgggcagccatagctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0572300, RefSeq:Os01g0572300