Os01g0574400

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0574400| Description = Similar to Cell division protein ftsH (EC 3.4.24.-)| Version = NM_001049919.1 GI:115437799 GeneID:4326310| Length = ...")
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Gene Name

Os01g0574400

Description

Similar to Cell division protein ftsH (EC 3.4.24.-)

Version

NM_001049919.1 GI:115437799 GeneID:4326310

Length

5409 bp

Definition

Oryza sativa Japonica Group Os01g0574400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23731232..23736640

Sequence Coding Region

23731371..23731397,23732225..23732312,23732643..23732903,23733660..23733896,23733986..23734110
,23734828..23735304,23735390..23736304

Expression

GEO Profiles:Os01g0574400

Genome Context

<gbrowseImage1> name=NC_008394:23731232..23736640 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23731232..23736640 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtggaggcgcgtcctttcgcagcttgcgaggagtcgaccagcatccacaatctacaatgaactgataacctccagaccttcgtggctgcttagaggtgacgtcaacggtggtggcacacttaaaaacttaaatgagaggtatcagtcaagctttgttggtagcttagcacgcagggtgcaaaacctcgacgttccaagtgaagcctctctgctgaaagaaatatataaaagtgacccagaacgtgtcatacaaatatttgaaagccagccatggttgcactccaatcgtttagcactttcagagtatgttaaagctcttgtcaaggttgataggctggatgatagcaccttgcttaaaacactacggagaggtatggctgtttcaggaggagagggagaaagagttggtagctcttctgcattaaagagtgctggacaagcgacaaaagatggaattcttggcactgcaaacgcacccattcacatggtgacatcagaaacaggccattttaaggatcagatttggcgtacctttcgaagccttgcactaactttccttgtaatttcgggcattggggctcttatagaggatagaggaataagcaaaggtcttggtctaagtcaagaagttcaaccaatcatggattctaaaacaaaattcagtgatgtaaagggtgttgatgaagccaaagctgaacttgaggaaatagttcactatcttcgagatcccaagcgttttactcatcttggtggaaaactgccaaaaggtgtcttgctggttggccctcctggcactgggaagaccatgttagcgagggctgttgctggggaagctggtgtccctttcttctcatgcagcggtagtgagtttgaggagatgtttgtaggtgtaggagctagaagagtcagggacctttttgctgcagctaaaaaacgttctccctgtatcatattcatggatgaaattgatgcaatcggtgggagcagaaatccaaaggatcaacagtacatgaggatgaccttgaaccagttgcttgtcgaactggatggctttaagcagaatgagggaataattgtcattgctgcgaccaactttcctcagtccctagataaagcactagtgagacctgggcgctttgaccggcatattgttgttccgaatcctgatgttgaaggccggcggcaaatcctagagtcccatatgttgaaggtcttgaagagtgatgatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgctaacttggtaaatgtggctgctcttaaggctgccatggatggggcaaaagccgttacaatgaatgaccttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagttatttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgccatccacactgaaggtgctcgccctgtccacaaagccaccatagtgcccaggggaaggacccttgggatggtgtcccaactcccagaaaaagatgagacaagcttctcacggaaacagatgctggcatggctggatgtctccatggcaggacgggtggcggaggagcttatttttggggatagcgaggtaacatccggtgcatcgtctgatttccagaacgcgaccaaaatggcaagagcaatggttacgaaatatggcatgagcaagcagcttggctttgtctcttacaattatgaggatgatggaaagagcatgagcacagaaacaaggcttctgattgagcaggaggtgaagagcctgctggagaatgcctacaacaatgcaaagaccatcctcacaaaacacagcaaggagcaccatgttctagcccaagcacttcttgagcacgagactctcaccggagcccagataaagaagatcttggcccaggcaaatagcacacagcagcagcaggagcatgctgttgaagctccacggaagacgccagctgcgccgtcgtctccagctgcgtcggcggccgcagcggcggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggtgttgctggtattggatcttga</cdnaseq>

Protein Sequence

<aaseq>MAWRRVLSQLARSRPASTIYNELITSRPSWLLRGDVNGGGTLKN LNERYQSSFVGSLARRVQNLDVPSEASLLKEIYKSDPERVIQIFESQPWLHSNRLALS EYVKALVKVDRLDDSTLLKTLRRGMAVSGGEGERVGSSSALKSAGQATKDGILGTANA PIHMVTSETGHFKDQIWRTFRSLALTFLVISGIGALIEDRGISKGLGLSQEVQPIMDS KTKFSDVKGVDEAKAELEEIVHYLRDPKRFTHLGGKLPKGVLLVGPPGTGKTMLARAV AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRNPK DQQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDV EGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTM NDLEYAKDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIHTEGARPVHKATIVPRG RTLGMVSQLPEKDETSFSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATK MARAMVTKYGMSKQLGFVSYNYEDDGKSMSTETRLLIEQEVKSLLENAYNNAKTILTK HSKEHHVLAQALLEHETLTGAQIKKILAQANSTQQQQEHAVEAPRKTPAAPSSPAASA AAAAAATAAAAAKQAAAKAKGVAGIGS</aaseq>

Gene Sequence

<dnaseqindica>140..166#994..1081#1412..1672#2429..2665#2755..2879#3597..4073#4159..5073#aattgacaaacgtaaaattggcagatagttaaatccccttcccccctccccctcccccgccgccgccctcacacaggggtcttagttttccttgtgggtttgggatctcatcgaggcggcggcggcgggattccggccgatggcgtggaggcgcgtcctttcgcaggtgcgtttttcttccggcctttctccctccttttgtccgctgcgcgtctctcctcgcctcgtgggttgtggtcggggaggaggactcgatcttgcgcggtgggcgcggggaggcgggggagttggtgtcgtctcctgttaagagtagtaatcttgggagatgttcgcgtgggtgcccgtattggatggaagggttagatgctccgcgccgcgattaagctggctgtttcttgacctggattagcgtgatcctgttcgtgctggatgctttgtggttttagactaatccgttaaaaacagcaacgcaaccttgttttcatggtttggcgttctttcgcgtagtctaattgggggactcgatcgatcttagcgatgggctgggttttaggtggtgtgttttgatggttgcggtcgtgatgatgataaacttgggagtagtgacctcggcaaactgagccttcacgcgggtgcctataaatgtattggaacgctgcatgctctgcccgattagtttgatgttctttgatccaaccagtggtgatcctgtttatgtttgattcttgaggctttagactaatcgatttgaagcagaaaaggcctcttcatttcatttcacggtcctctatcttggtgtgttagcttgttgttgtaggcatgcgttttgtggaaaaagctaatttgagcatatcggtgctgcaatgatttgctttattgcactgtattttctgtttctcttctagtttttatatgcattacattaaatgagtatccgtgctgcaatgatttggtttatgacgcaaggttgcttcttttcttttttcataaaagcttgcgaggagtcgaccagcatccacaatctacaatgaactgataacctccagaccttcgtggctgcttagaggtgacgtcaacggtggtatgtagtctttgtataaagctcaaccattctagtcatgcagtaacactatcctgcaacagcaaccttctaaaattatggtacataagaggttatgtctaacttgaataactggcatgtagtcttccatgtaaatatatgccttgataaattggtgcattcctcctttttctttcccctttcctgtgctttaagaaaagctatcggaattggcataattttgttataatttattataatgtttttctgtacgcagcaccaccacttccatttatgcttgttgtggaataatttctttgcacttcctttattgagttgtgcttaatgcaggtggcacacttaaaaacttaaatgagaggtatcagtcaagctttgttggtagcttagcacgcagggtgcaaaacctcgacgttccaagtgaagcctctctgctgaaagaaatatataaaagtgacccagaacgtgtcatacaaatatttgaaagccagccatggttgcactccaatcgtttagcactttcagagtatgttaaagctcttgtcaaggttgataggctggatgatagcaccttgcttaaaacactacggagaggtaccgatatccacaaacaccttatctatttcacggctatgaagcattacatctgctgcttttgttgggctatattagttttccttaattaaacagtgaagggtttaatcagtttggaaagcacttgtatttaatggtgctaactaacaaattctttgtggatgtgacttattacaagtataatctttcagtttgtcattaagtagtacaagggaattacaggatattataacagtaaacaattctctatatgatagcatatagatgttgcctcgaaaccttcatctcgtgtagtgtgatttgtatatctccatggcccatggaaagaaattacaacatatatagcatataacaaattcatagatgttcgtcctgacgtaccatatagattttgccttgaagaaactatcagactctactttagttcctattactttaacttgtagttcttcatggcctgtaaccttgtagtatcttaatttttggtcattggcttttacaatagtggcataaatcataatcttgcgctacatgttctgtacttacaatggcaatcctatttttctctttggtatttgattttgtcttctcgagtttgggttcagagaaacctatttgttgtacatgttgagagtatcttgtatgccattgactaaactacttttactttgaagcctgtgtatgtttccttcagttattaatggtgactatttgattaaactggcataaagcttcattgatgtgttatccgtacaggtatggctgtttcaggaggagagggagaaagagttggtagctcttctgcattaaagagtgctggacaagcgacaaaagatggaattcttggcactgcaaacgcacccattcacatggtgacatcagaaacaggccattttaaggatcagatttggcgtacctttcgaagccttgcactaactttccttgtaatttcgggcattggggctcttatagaggatagaggaataagcaaaggtttggttttctgaaatatctgaatgactaattttctagacctttactggacttctttgctgtgattctgatcgatgaaatttgtgtaggtcttggtctaagtcaagaagttcaaccaatcatggattctaaaacaaaattcagtgatgtaaagggtgttgatgaagccaaagctgaacttgaggaaatagttcactatcttcgagatcccaaggtaattgtttctggacacctgttgtgaaagatggtaaaatttgtctggctgcttggatacagagttatgtcaatttatacgatgtgtcttaaagggtatatttcctcacttgacaatggttttaacagttacttatttttagtaataaacattaatatgaggtaatttcacaaaaaccacatgcttatagtccaagttgcagaaacctctgtaggtttaacacttggcacttaatcactataaatttcataaaagtgcagtcttaacaaatttagctatttttgcacgtgtggtccatctgcaagctggcctggattattcttttccatgctatgatgtaaactgttctgcaggagattcatctgaaatgttgtttttctgaatcttgaggtgttgattttgttgatagtatcaatgtcctggtccattcaaaacttttgcttgattttgttgatagtatccagcttgtttatcctattatctgggtcctataactttgacttggcactatcaagtgcatggctttttcaattgctttcttaaatcaatgttttgtgatttagaccatatctgtggagataatatcgtgttatgtcagtctctcacagatatgttgtgcactttaatgcatatatgatctatcatttcataactgtttttgtcatatacttgtgctatatggtgatcagaagtcacaagctgcctccttcttttcagcgttttactcatcttggtggaaaactgccaaaaggtgtcttgctggttggccctcctggcactgggaagaccatgttagcgagggctgttgctggggaagctggtgtccctttcttctcatgcagcggtagtgagtttgaggagatgtttgtaggtgtaggagctagaagagtcagggacctttttgctgcagctaaaaaacgttctccctgtatcatattcatggatgaaattgatgcaatcggtgggagcagaaatccaaaggatcaacagtacatgaggatgaccttgaaccagttgcttgtcgaactggatggctttaagcagaatgagggaataattgtcattgctgcgaccaactttcctcagtccctagataaagcactagtgagacctgggcgctttgaccggcatattgttgttccgaatcctgatgttgaaggccggcggcaaatcctagagtcccatatgttgaaggtaattcttgagaacttttggtatcatgtttgtccaggctaaaatggaatgtcttatagttatccttatacacatatgattacaggtcttgaagagtgatgatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgctaacttggtaaatgtggctgctcttaaggctgccatggatggggcaaaagccgttacaatgaatgaccttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagttatttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgccatccacactgaaggtgctcgccctgtccacaaagccaccatagtgcccaggggaaggacccttgggatggtgtcccaactcccagaaaaagatgagacaagcttctcacggaaacagatgctggcatggctggatgtctccatggcaggacgggtggcggaggagcttatttttggggatagcgaggtaacatccggtgcatcgtctgatttccagaacgcgaccaaaatggcaagagcaatggttacgaaatatggcatgagcaagcagcttggctttgtctcttacaattatgaggatgatggaaagagcatgagcacagaaacaaggcttctgattgagcaggaggtgaagagcctgctggagaatgcctacaacaatgcaaagaccatcctcacaaaacacagcaaggagcaccatgttctagcccaagcacttcttgagcacgagactctcaccggagcccagataaagaagatcttggcccaggcaaatagcacacagcagcagcaggagcatgctgttgaagctccacggaagacgccagctgcgccgtcgtctccagctgcgtcggcggccgcagcggcggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggtgttgctggtattggatcttgagcgcatggaacatccaccgattggcagcataggagtacaatctaagtagcagctaaggtaggagatttgagcaaaatgtgtagtgttcacctgctcttctgcgcaagaaatgtcttttggtacgttctcaccaggtcagagctgttttgttgctggagaccttcccttccaggctccagcgaggggcctatgtagtgttgatatattgtagtaataatttgatagctaaccgtagtccatgtcctttgtttatttatctttatttaagaaactgacgactattaaaaatagaggggacataggaccaatattcaggaaatattattaaggttcagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0574400, RefSeq:Os01g0574400