Os01g0574800

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0574800| Description = Harpin-induced 1 domain containing protein| Version = NM_001049922.1 GI:115437811 GeneID:4326313| Length = 1026 bp| ...")
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Gene Name

Os01g0574800

Description

Harpin-induced 1 domain containing protein

Version

NM_001049922.1 GI:115437811 GeneID:4326313

Length

1026 bp

Definition

Oryza sativa Japonica Group Os01g0574800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:23755479..23756504

Sequence Coding Region

23755519..23756394

Expression

GEO Profiles:Os01g0574800

Genome Context

<gbrowseImage1> name=NC_008394:23755479..23756504 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:23755479..23756504 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaccgggcgtacgtgccggcatcgaagccggtgccggtggcggcggcgcgggcggcgaacggggtggcgaacggaggcggaggaggggttgggggtgggggagggggaggggcggcgcggccgccgcccatggtgccagggcgcgtgcccccgccgccgatgtacaggccgaagccgatgcaagcgccggcgaggcggaggcggagccggcgcgggtggtgctgcgcgtgctgcctgtggatgacgctggtggtggtggggctggtgttcctgggcgccatcgcggcgggggtgttctacgtggcgtaccacccgcagctccccaccttcgccgtcacgtccctccgcctcgccgcgctcaacgtgtccgactccgacgccgtcacctcccgcatcgagttcaccgtcaccgcccgcaaccccaacgacaagatcgccttcgcgtacggcgacatcgcggccgcgttcgccgcggacggcgccgacgtcggcgacggcacggtcccggggttcgtccaccccgccggcaacaccaccgtcatcaagggcgacgcctccgccgccgccgccaccgtggacccgctggtggcgaacggcctcagatccaggaagtcgcacgccatgtcggtggagatggactccaaggttgggttccagatcggccgcttcaagtccaagcgcatcaacgtccgcgtcctctgcgccggcttcaccgccgccctcgccaagaacaccccctccgctccaccgatcgtcgtcgccgccgccccgtcgccggtgaggtcggtcgtcaaggcctcctcctcctcctcgagcacgacggacgccaagtgtaagctccgggtcaagatctggatttggacattttga</cdnaseq>

Protein Sequence

<aaseq>MGDRAYVPASKPVPVAAARAANGVANGGGGGVGGGGGGGAARPP PMVPGRVPPPPMYRPKPMQAPARRRRSRRGWCCACCLWMTLVVVGLVFLGAIAAGVFY VAYHPQLPTFAVTSLRLAALNVSDSDAVTSRIEFTVTARNPNDKIAFAYGDIAAAFAA DGADVGDGTVPGFVHPAGNTTVIKGDASAAAATVDPLVANGLRSRKSHAMSVEMDSKV GFQIGRFKSKRINVRVLCAGFTAALAKNTPSAPPIVVAAAPSPVRSVVKASSSSSSTT DAKCKLRVKIWIWTF</aaseq>

Gene Sequence

<dnaseqindica>111..986#ttctttttcttccttccttttactcgctcgctcgctcgctgggtgttcgtccatttgcccccaagccggagctgcgcgagcagcagcagcaggagagagagagagagagaatgggcgaccgggcgtacgtgccggcatcgaagccggtgccggtggcggcggcgcgggcggcgaacggggtggcgaacggaggcggaggaggggttgggggtgggggagggggaggggcggcgcggccgccgcccatggtgccagggcgcgtgcccccgccgccgatgtacaggccgaagccgatgcaagcgccggcgaggcggaggcggagccggcgcgggtggtgctgcgcgtgctgcctgtggatgacgctggtggtggtggggctggtgttcctgggcgccatcgcggcgggggtgttctacgtggcgtaccacccgcagctccccaccttcgccgtcacgtccctccgcctcgccgcgctcaacgtgtccgactccgacgccgtcacctcccgcatcgagttcaccgtcaccgcccgcaaccccaacgacaagatcgccttcgcgtacggcgacatcgcggccgcgttcgccgcggacggcgccgacgtcggcgacggcacggtcccggggttcgtccaccccgccggcaacaccaccgtcatcaagggcgacgcctccgccgccgccgccaccgtggacccgctggtggcgaacggcctcagatccaggaagtcgcacgccatgtcggtggagatggactccaaggttgggttccagatcggccgcttcaagtccaagcgcatcaacgtccgcgtcctctgcgccggcttcaccgccgccctcgccaagaacaccccctccgctccaccgatcgtcgtcgccgccgccccgtcgccggtgaggtcggtcgtcaaggcctcctcctcctcctcgagcacgacggacgccaagtgtaagctccgggtcaagatctggatttggacattttgacggatttgacggtagagaagacttccttcttccttcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0574800, RefSeq:Os01g0574800