Os10g0492200

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0492200| Description = Protein of unknown function DUF563 family protein| Version = NM_001071465.1 GI:115482673 GeneID:4348978| Length = 24...")
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Gene Name

Os10g0492200

Description

Protein of unknown function DUF563 family protein

Version

NM_001071465.1 GI:115482673 GeneID:4348978

Length

2477 bp

Definition

Oryza sativa Japonica Group Os10g0492200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19140182..19142658

Sequence Coding Region

19140529..19141778,19142138..19142260,19142384..19142513

Expression

GEO Profiles:Os10g0492200

Genome Context

<gbrowseImage1> name=NC_008403:19140182..19142658 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19140182..19142658 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagacgaggagctcggggaggggaggaggggagccgaggaggaggctgaggaatgcggctgtcatggcgctcatgctctcctccctcgtcgctctctccctcgtccgcgccaggttctcccccatcgctagtgatggaggcgaggccctcaagctcaaggccgacgaatccaagctcgtcgtcaccaccaatcacgccgtcgtcaacaccgaatccggcgactcctcctcctcctcgtcgtcggcggctgcggaggaggaggaggaggtcgccgctccggcgaagcccgccgccgccggcggcggcggggccaggccggtgtgctacgagacgagccgccgctccgacacctgcgaggccgccggcgacgtgcgcgtggtggggggcagccagaccgtctacgccgacacgcttgaccgcgagtggaagacgaagccctactgccgtaagcacgacgcgttcgcgctgtcccacgtcaaggagtggacgctcaggccgctcccctccggcgatggcggtggcggtggcgcggcggtggcgccgaggtgcacgacgaacagcacggccacggcgttcgtgctgtcgaccggcgggttcacggggaacccgttccacgactacaccgacgtgctcatcccggcgttcatcaccgcgcaccggttcggcggcgaggtgcagttcctggtgagcagctacaagtcgtggtggatgaacaagtacatccagatcttccagcagatgagccggcacgacgtggtggacgtcgacgctgacggcgacgaggtgaggtgctaccggagcgcggtggtcgggccggagttccacagggagctcggcgtcgacccaaccaagacgccgtcgggctactcggtgctcgacttccgcaagatgctccgcggcgcgttcgggctggaccgcgccacagcgacgccgagcggcgaccggtgggacatccgccgccgaccccgcctcctgatcatctcccgccgcgccgcccgtggccgcgcgttcatgaacgagcgcgccatggcggacatggcggcgagcctgggcttcgacgtgcgtgtcggggagcccgacgcgtccacggacacctccaagtttgctcgcctcgtcaactcctgcgatgtcatggtgggagtgcacggcgccgggctcaccaacatggtgttcctacccgccggcgccgtgctggtgcaggtggtgccatacggcaagctggagtggctggcccggaacaccttcgctgagccgtcgtccgccatggagatccactacctggagtacgccgtgcagcttgacgagacaacgctgagcgagcagtaccccgccgatcacccagtgctgcgagaccctatggccatccacaagcaaggctgggaagctctcaagaccacttacctcgacaagcagaatgtccggccgcatctcggccgcctcaagaacaccttcctccaggccctcaagctgctgccccatgacaaggaaaccatgaattag</cdnaseq>

Protein Sequence

<aaseq>MKTRSSGRGGGEPRRRLRNAAVMALMLSSLVALSLVRARFSPIA SDGGEALKLKADESKLVVTTNHAVVNTESGDSSSSSSSAAAEEEEEVAAPAKPAAAGG GGARPVCYETSRRSDTCEAAGDVRVVGGSQTVYADTLDREWKTKPYCRKHDAFALSHV KEWTLRPLPSGDGGGGGAAVAPRCTTNSTATAFVLSTGGFTGNPFHDYTDVLIPAFIT AHRFGGEVQFLVSSYKSWWMNKYIQIFQQMSRHDVVDVDADGDEVRCYRSAVVGPEFH RELGVDPTKTPSGYSVLDFRKMLRGAFGLDRATATPSGDRWDIRRRPRLLIISRRAAR GRAFMNERAMADMAASLGFDVRVGEPDASTDTSKFARLVNSCDVMVGVHGAGLTNMVF LPAGAVLVQVVPYGKLEWLARNTFAEPSSAMEIHYLEYAVQLDETTLSEQYPADHPVL RDPMAIHKQGWEALKTTYLDKQNVRPHLGRLKNTFLQALKLLPHDKETMN</aaseq>

Gene Sequence

<dnaseqindica>881..2130#399..521#146..275#ctcctcctcctcctcctcccccatctccggcgccgcgcgccgccgcccggaggagagcttctcgccggtgctgctactgctactaatccccacacccacctgctctcagctcagctcagctcagcttcccagctcggcgaagaagatgaagacgaggagctcggggaggggaggaggggagccgaggaggaggctgaggaatgcggctgtcatggcgctcatgctctcctccctcgtcgctctctccctcgtccgcgccaggttctcccccatcggtaatcgaatcgaatccccccatcctcctcctcttcgccgcttaattgttttttgttggatgctgctatggtggcgaggagaaggcgagagctgattcggagttcttctcccttccttcgcagctagtgatggaggcgaggccctcaagctcaaggccgacgaatccaagctcgtcgtcaccaccaatcacgccgtcgtcaacaccgaatccggcgactcctcctcctcctcgtcgtcggcggctggtaattacgagatgcgtttcttggatcttgagcggcgcagtgcagcgcattgcttggctgattcgttcttggcgatttcatttcgtatccgttttttcgattcgagtttagttcaaacgaggactagaggagaggaagaaaaagaggaaaaggaatcgaagaatccatgaattccactggctgtttaataactaagaagaaattgaatttgtttttttttttgcgagttgttgtcctagttcataatttatttcttgggctttttgcggagtttttgcgctaaagaatggcgtggattcggctgcgagattccgcgaccacagatctaattaaaaccgattctcctcgtgttgctgcagcggaggaggaggaggaggtcgccgctccggcgaagcccgccgccgccggcggcggcggggccaggccggtgtgctacgagacgagccgccgctccgacacctgcgaggccgccggcgacgtgcgcgtggtggggggcagccagaccgtctacgccgacacgcttgaccgcgagtggaagacgaagccctactgccgtaagcacgacgcgttcgcgctgtcccacgtcaaggagtggacgctcaggccgctcccctccggcgatggcggtggcggtggcgcggcggtggcgccgaggtgcacgacgaacagcacggccacggcgttcgtgctgtcgaccggcgggttcacggggaacccgttccacgactacaccgacgtgctcatcccggcgttcatcaccgcgcaccggttcggcggcgaggtgcagttcctggtgagcagctacaagtcgtggtggatgaacaagtacatccagatcttccagcagatgagccggcacgacgtggtggacgtcgacgctgacggcgacgaggtgaggtgctaccggagcgcggtggtcgggccggagttccacagggagctcggcgtcgacccaaccaagacgccgtcgggctactcggtgctcgacttccgcaagatgctccgcggcgcgttcgggctggaccgcgccacagcgacgccgagcggcgaccggtgggacatccgccgccgaccccgcctcctgatcatctcccgccgcgccgcccgtggccgcgcgttcatgaacgagcgcgccatggcggacatggcggcgagcctgggcttcgacgtgcgtgtcggggagcccgacgcgtccacggacacctccaagtttgctcgcctcgtcaactcctgcgatgtcatggtgggagtgcacggcgccgggctcaccaacatggtgttcctacccgccggcgccgtgctggtgcaggtggtgccatacggcaagctggagtggctggcccggaacaccttcgctgagccgtcgtccgccatggagatccactacctggagtacgccgtgcagcttgacgagacaacgctgagcgagcagtaccccgccgatcacccagtgctgcgagaccctatggccatccacaagcaaggctgggaagctctcaagaccacttacctcgacaagcagaatgtccggccgcatctcggccgcctcaagaacaccttcctccaggccctcaagctgctgccccatgacaaggaaaccatgaattagcttagctcatcagaactgttgatcgtcatggattgtcatcggcaccgtcatcgccatcgccatgccatcgtcatggtgacttgaatttgtggtataaatagatagataggtagctaattttttttcttttttcaaaattattagtattttgtattgatccctagcaagttgccaagatcaggtataatcagtagcttatctgaaataatccgttgcaacgcacgggtatttggcaatgtctatagaaacaatggtgatattgtttgtatgcaccatatttcttaacatatcaagtaagccaaattatcttatactagcagaaacccatattttcatggatttcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0492200, RefSeq:Os10g0492200