Os01g0578600

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Revision as of 04:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0578600| Description = Conserved hypothetical protein| Version = NM_001185503.1 GI:297720140 GeneID:9269129| Length = 3818 bp| Definition ...")
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Gene Name

Os01g0578600

Description

Conserved hypothetical protein

Version

NM_001185503.1 GI:297720140 GeneID:9269129

Length

3818 bp

Definition

Oryza sativa Japonica Group Os01g0578600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24035904..24039721

Sequence Coding Region

24035988..24036248,24036333..24036402,24037293..24037390,24037484..24037558,24037651..24037754
,24039309..24039345

Expression

GEO Profiles:Os01g0578600

Genome Context

<gbrowseImage1> name=NC_008394:24035904..24039721 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24035904..24039721 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccccctcggcccgcttcaccacagagcttgccgcccgtggctgccacccgatcccgcggtcgcccgtacgagggctggactctcaaggagctgattggggaggtgcgccgtctacgacgagccgcctcctcggcgccgccccggccggcgggcgtcctcgacctcgaccagggggacgcgcgcgcctcggacacggtcgccccctcgccgccctcaccgtgtgaatcccaggagcaaccccaccatcttggcaagaggctggaggatgtgcttatttccctacgggatgtcgccttccagttcatcaagatcggtcgacaagacgaggtgcgtaaaatcgtgaatgtagcacacgatattgtggttaacttctgcaatgccattagagcgcccgaagcgttcaaattagtggctgctgctgagaatgtgaaaccacatctgttgaagatagatcatgatgacaaccttctgtttctacaatttaaggctgcactggagcaggttcacaatgttaaccatgagattgctatatctcttgacaagtacaccaattgcccactgtccgggacggagattgcagagttaactcagccattgagaaggttgtcctggtgctgtgtcaaacgacctggtatttga</cdnaseq>

Protein Sequence

<aaseq>MAPPRPASPQSLPPVAATRSRGRPYEGWTLKELIGEVRRLRRAA SSAPPRPAGVLDLDQGDARASDTVAPSPPSPCESQEQPHHLGKRLEDVLISLRDVAFQ FIKIGRQDEVRKIVNVAHDIVVNFCNAIRAPEAFKLVAAAENVKPHLLKIDHDDNLLF LQFKAALEQVHNVNHEIAISLDKYTNCPLSGTEIAELTQPLRRLSWCCVKRPGI</aaseq>

Gene Sequence

<dnaseqindica>85..345#430..499#1390..1487#1581..1655#1748..1851#3406..3442#gtccctgcccatttcgccctccccggccgtccccgtcgatatcacccgagccctaactcccgactccttcctcgccgcgccgccatggcgccccctcggcccgcttcaccacagagcttgccgcccgtggctgccacccgatcccgcggtcgcccgtacgagggctggactctcaaggagctgattggggaggtgcgccgtctacgacgagccgcctcctcggcgccgccccggccggcgggcgtcctcgacctcgaccagggggacgcgcgcgcctcggacacggtcgccccctcgccgccctcaccgtgtgaatcccaggagcaaccccaccatcttggcaaggttttgagtactcatcctctcatccacgtccttttccaagctcaaaccccccaccctttttaatttgttcgttcgtgcccgcagaggctggaggatgtgcttatttccctacgggatgtcgccttccagttcatcaagatcggtcgacaagacgaggcaagcactacaaaattttaacgcgttgtctctctctctctctctctctctctctctctctttaaaaaaaatctatatatgccattccaaacgatagcattttgggggaagaaaagaacagtggacagctaatcatgtttacagtaggaacaaacgacgagacattacaggttttcagatagaaacaaagatcctgaagtgcgtaggattcgtatcgtgactaacaaggacataatactataatagccactaggcacagaaaatgcttcaacatggtatgcagtgtgcaccctcgctgacaccagtatgttgtttggtagatgctttgcaaaattgtatgcatctcttgtcaggaatgatgccattggcaggacaatgatctgtgaaaccaccagaataaagcacatatatcttggcttagcgacacatatatagccatgcccattgtatgcatcatgaacgacttacacatggactagcttgctggacggtagctctcagccagacaaccacactttacagatgcgcacatgcttttaacaaacaatttttcagagttcaagctagttcaaaccattaaacttggatgagtctaatatatcttttggagtttgatacatgacatattcttttttttattggtgtgactatacacacaacagacattgcgaatctaaaagcacacctatgggtattgatttgagtgcctagacacagaggtgcttgaaacgctgccctaagaatgttactgagaatggcaccaacactaacattagttaggccattaagattatcccatgaacaagaccttccttgctcattgtaaaacttcaggttatttgaatgcttatgcagttatgtggttatgtctgattgcaattcttttctaggtgcgtaaaatcgtgaatgtagcacacgatattgtggttaacttctgcaatgccattagagcgcccgaagcgttcaaattagtggctgctgctgaggtatctttttttaaaatggtcgctcttttttgagcatttgtttctatttatttgcttattttctttgtcctgtctgttataatctgttgacagaatgtgaaaccacatctgttgaagatagatcatgatgacaaccttctgtttctacaatttaaggctgcactggaggtacacgctgttgatgcaatatacaagtaaagaagtaaatgtcaccttttttccctgtagaatctaatctgtataatatgcagagggaacagcaggttcacaatgttaaccatgagattgctatatctcttgacaagtacaccaattgcccactgtccgggacggagattgcagagttaactcagccattgagaaggtacatcgtcagcaaaatatacttcagttattagctcctctatcacaaaatagtgctgttttagacagaaaaaagtccagaatccagatatcggattggttgctaaaaattccaatgtgcaatattgagcatataatttctggtgtgaaatatttgtaacacctaataaaaatattatattttcaatgcaatatttgatcggacaaaatttataaaattggaccatgaataaataacatttatttgtgattagatatttggagggagcactccctagcctaataactgcagcctacttcactgattattttttttctttgattcattatgacttgtggccacatattcgagcggcagcacatcatgaactacatgggttcctctctcaaggggtgcccggtcattggttagtataagtgttcatttgtgaggataatttttcaaatgtgccatcacaagtatacaactggatttgcacaatgttacttgaaatgccattgacttcatcagggaatactattctgaaatggttaataggaaccttgcatgtaaaaacttctccatccatttgttagcacttagcataagtctacattattaggaagtatgatttcacaatgtaagtcaacaaaagaattcaagaacatcatcgatttatcattgcaatatttctatattctatctctgatttaataatgtaaaagaggtttgatatttctattatactataatgggggtatatggcccaatgctattagctttgtattggacttttaggtctttcaatgttggggggatgggagctactgtaatatttatcgtgaaacaaggagggagggggtagtataatgccgccattatttatatgaaaaaaaagaagaagagagaacttggtatgtataccattccattgctttgctttatttggtatacaacaaaaacaacagctatgtgatggtgggaagtgtctagcactgtagtgggtctttttatctggtttgttcaacaatgtgctgcatggttgtggcaagtccaacaagtggcatgttgtgtgggtgagatccatgggtgatggtgtgagagtggtggcaaggttgttgcaagctatgtgctacctgattccatggtggtgacctggtggggcatatgaccgacatgtcccttatggataaggtaaacagcggtagtctgactagtatgactggcagttcctgtggttaatggctgagtatccatagggtataagacgtgtgtaattcttttcaagaagtgactagcaaagccattttggttaattttgtgagtgcaaccagtggtgctgagagggagggataaataacgctgatagtccttgacatatttttttattaaaaaaatattctagtaaggccattttgagaaatcttgtgcaaaatcagttgcatagttgcatttagccgatttctgatgttattttgtagttaagaaatttaaatgatggcatttgaaaatctctctttttttaaaaaataatgttttgtgttgaggttgtatgaggttctaagtcttctttaggttgtcctggtgctgtgtcaaacgacctggtatttgaggatgcagagcttaggcacgacataaagtactgccactgacagagagtaagccaaatggtttcaatccagttacaccaggtgaatagctcggtaactggatcttatatgaaaagagactattgttttctttgtatgcaggaatgtgcaagaggtttggtttggttacaggtcgaacaggcttcaattctgcaacgcgaggcaaacgtctgctgtgttttgtttctctgggcacctgtcatttacctttggcttaaacaaggcattcagcggttgatcgctgtgccatgcccttgtacatagaaacaaatattattctgtacatggaatggaagagttccaacacctgcaaatgaatgagcactgtcagcgttgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0578600, RefSeq:Os01g0578600