Os10g0492300

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0492300| Description = Conserved hypothetical protein| Version = NM_001071466.1 GI:115482675 GeneID:4348979| Length = 5383 bp| Definition ...")
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Gene Name

Os10g0492300

Description

Conserved hypothetical protein

Version

NM_001071466.1 GI:115482675 GeneID:4348979

Length

5383 bp

Definition

Oryza sativa Japonica Group Os10g0492300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19145195..19150577

Sequence Coding Region

19145536..19145637,19146243..19146343,19146428..19146552,19146673..19146746,19147010..19147074
,19147298..19147364,19149078..19149176,19149259..19149303,19149437..19149560
,19149686..19149745,19150068..19150182,19150228..19150534

Expression

GEO Profiles:Os10g0492300

Genome Context

<gbrowseImage1> name=NC_008403:19145195..19150577 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19145195..19150577 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgccgccgccgcggcggcggcggcggcatcgtcgtcgctgctgtcgctgcgggggaggaggaggagggtgggggtggtgtgcgcggcggtgtcgtcgggggaggaggtgttcggggggaggagggagctggcgggggtgcagccgctggtggaggcgctgccgccggtggcgagggcggtggtggagctggcggtggtggccgcggcggcggcggcggggtacgtggtcgggctccgcgcggggggcacgcggaccacgacggcggcggtgaactccgccgtgcccggggtcgccgcggcggggctgcacaactacgtcgccggctccgacgaccccaccaagctggagagcagcgaggtggaggccatcgcgagcaaatacggcgttagcacagaggatgcaaccttcaaggccgagctctgtgatttgtatggcaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttgagactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaatgtgcacatggagattgctaaacgcattgatcgcaatgctggtgtaggacaacagcaggcatttgaaaagcttatatttgtaacaaatcttgtgtttcgggatgcatatgaatacctacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgagggaaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgcttctgagatgttcagggagcatgcaaagaagttagttgaagaaaacatttcaacagccttgaacaacttgaataaccgaacacaggttgttgaagaagtgaaaagcatcctttcatttaatggtatgcttacagtactgagcaatttcccgggagaagaaagatttgtccgcgggcttgggcctattacattaggtggagacagtgatcatgaaaagagggtagaggatctaaagatgctctatagtgcctatgcaatggaggtactttcagatggacatcttaacgatgacaagcttgcggctttgaatcaactgaggaatatatttggactggcgaagtacgaagcagaagcaatcatcacagatgtcaaggctcgagtatttcagacctactaa</cdnaseq>

Protein Sequence

<aaseq>MELSLASAKPSPRAAAAAAAAAAASSSLLSLRGRRRRVGVVCAA VSSGEEVFGGRRELAGVQPLVEALPPVARAVVELAVVAAAAAAGYVVGLRAGGTRTTT AAVNSAVPGVAAAGLHNYVAGSDDPTKLESSEVEAIASKYGVSTEDATFKAELCDLYG RFVFSLIHPGYEDLEGTEVETIIKFKKALGLNDIDAANVHMEIAKRIDRNAGVGQQQA FEKLIFVTNLVFRDAYEYLLPWKRLFGVHESQIDDVMRESAKSLYASLLKSIGRGLDI GTLIEVRRSQLAYKLSDEIASEMFREHAKKLVEENISTALNNLNNRTQVVEEVKSILS FNGMLTVLSNFPGEERFVRGLGPITLGGDSDHEKRVEDLKMLYSAYAMEVLSDGHLND DKLAALNQLRNIFGLAKYEAEAIITDVKARVFQTY</aaseq>

Gene Sequence

<dnaseqindica>4941..5042#4235..4335#4026..4150#3832..3905#3504..3568#3214..3280#1402..1500#1275..1319#1018..1141#833..892#396..510#44..350#gctcgccacgccacgccacgccacgccgcgcgcgcgcacagcaatggagctctcgcttgcctccgcgaagccctcgcctcgcgccgccgccgccgccgcggcggcggcggcggcatcgtcgtcgctgctgtcgctgcgggggaggaggaggagggtgggggtggtgtgcgcggcggtgtcgtcgggggaggaggtgttcggggggaggagggagctggcgggggtgcagccgctggtggaggcgctgccgccggtggcgagggcggtggtggagctggcggtggtggccgcggcggcggcggcggggtacgtggtcgggctccgcgcggggggcacgcggaccacgacggtggcgggcgcggcggcgctcggggcggtcagcgtcgcgggcgccgcggcggtgaactccgccgtgcccggggtcgccgcggcggggctgcacaactacgtcgccggctccgacgaccccaccaagctggagagcagcgaggtggaggccatcgcgagcaagtgagtgttggatttgcagattgctcgtctatacttgctgcatttggttgtgtgattttttatttttactcgtttacttctgaaactcccatttgctgttagaatgctagtaaaattttgttctagcttgtttatgcaaattgaacaacctataattatcaggaggaggaggatttttttttttttactaatgcgagctaaaaattctgtttataaaatgagatgcatattgccatacctataaaattaaaattagaattcatatattgaatgtatctctcttactccgtcaaatgatccttttactatcaattatttttagatacggcgttagcacagaggatgcaaccttcaaggccgagctctgtgatttgtatggcaggtatgtatgtttccttctagaaatcaatcttaaacatgtcctgtttttagttcagatccttttttttttggtcttgtagtatataagcatttgctcatcttgttctcatgtccattttattccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttgagactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaatgtgcacatggaggtagtgccccaagatctaggcccttttatttctaactgtctgcctcagatatttcttctactttagtcttcattttcacatttccacagttttcccttcctcctcacttctttcattgcgcttgttgtaatagattgctaaacgcattgatcgcaatgctggtgtaggacaacagcaggtacgtggttgtgctgtgatatatacatgggtactttgaattttctattgatccgatgataaccattttaaatatttggcaggcatttgaaaagcttatatttgtaacaaatcttgtgtttcgggatgcatatgaatacctacttccatggaaacgtcttttcggggttcatgaatctcaggtacttaattaaaataatcatcattcgtttaaaccgtgcatatcatctctttgtttcatgatctcgtcatatggagaaagcaggggatcattagagagttttaatcatctatgctggtatttgaagtctagttgcacaaattctctgacattgttaccactgcaattcttaaaggcctctagcatgttgagtaatctctttgcataatgttgtactattgtgctgttctcagtgtaatggttgttgggttatggctttggccgaaagcctacactgtcaaggtcagcatcaggtcacatgtattggcaaataatattctccacttaatcccaaaaaatgcaacttagagcattgctcttgccactgtaacattattagcaattaaatgcaaattttataacaatatggaagtctgaattatgacaattactccaatattattttcttgtggttaatttcaatatctacaatttgtaaagttatcagctataactatgaaaaaaaaatacatggcccactgtggcatgctggatatggtgcatgtaatattatgtgatacaacttttatccccacccccccccccacccccaaaaaaaaaataataatgctcaacattttgcatgctggatagaaccaaaaaagaaaggatgtgcatgcgataaatttgaaagttatttataatttgtcctggcttggtcaaggtgcaaaattttgaattgcatgggcacaaaatgattttcgagttttatactggagatgtacttgaaaggggagacctctcttgggggaaaactttgttcttgccactagaaaagtatgctgttttttgccatcaaaattacaccatttcatttttgctttccaaaattttgcgcttatctaattttttccatcatcatcaaaccctgctagttgaccattactactgtagtactatggcgtttgactttcacatattttcttactaagaccaaaatgcctctatcaaattgtgtgcccaatttgtcagcctttacctctcttttgatgccctttctcaccatttctctcgaagggttggaactttcagtaaaaaaattcagagtgcaccaaaataaccaaaactacagacttctaaaagcttaggtgcttttatctacaaatttacaaataatttattttttatcaagattttagacgaattgaattattgaatgattttcatcaatttgaatgagtcagtattttttagtgtgacaatttcaacaaattaaaatttggtattgttttttgaaatattaaatgaataacaccaaatttggatgaaggggtgtgttcatgtgatggcaggaacttcatctgactataacgcctctttgtcaattatgtcggtgcgagatagaagtttgactaagactttggttagctgtattggcaaaacaatacacacaaagatggtgcagacgaaataaggaattaattttgtgtcaaatacaaaaaccggtgcttgcttattactggcattagttagtagcctatgcaaactttgtagtggcatgaacaaaatttccttatcagcaatgagtatgcagattgcctgcaagctgtacaaaatgcgcattcacatatttctcatgtgcttttgttcatattttagtgcatagcttcttttgggtttatatcttgtttgatgataagattttatttagttacattattgttgttttcggcagatagacgatgttatgagggaaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtactgagacacttatatttctctttttaaggcattagttccatccataactgtcattatgtatactagattcactgttacagagtatttatgtctgaacagagacttggagcagtgcagaactgcagatagcaatgttatctcctgcttgtataattatacttgatagactatttactgcatttctacagaaatctcaactcaacatattctgtttctctaggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttctgatgaggtaacacttttcctctgaaaattttactgcttatttgcttttccccattttttcgttcattttgataaatacttgggaaaataccacttatatctaagtgtgcacgcttgccaagatgtcagactctggcgtttggacaacaaaaaagttttctatatttgattattcacataaatcttaaatatgatatgtaagatgaatggaattcatataggcatactacgttgttaagcggcatattctattatttaaatttattgcagattgcttctgagatgttcagggagcatgcaaagaagttagttgaagaaaacatttcaacagccttgaacaacttgtaagtcgtgtaccaaagcaacgtatgaaatgcacttttggacaacttgtccatgtgaatatagattcactacatttcataacatgaatggatttggcttcataaaccatatctttacaggaataaccgaacacaggttgttgaagaagtgaaaagcatcctttcatttaatggtatgcttacagtactgagcaatttcccgggagaagaaagatttgtccgcgggcttgggcctattacattaggtagagtggtaaagtatttcgaaattcatgtgttaatgaggtggcccttttctaatgctggctcctgtgctttgctttgcacaggtggagacagtgatcatgaaaagagggtagaggatctaaagatgctctatagtgcctatgcaatggaggtactttcagatggacatcttaacgatgacaaggtgatttcatgtataataccatcttttcagtttactggtgctgcttatgagatgccaagctgaaatgaggctgccggatggcaaattcaattaaccatctgcgttgaaacataacattgcaatttcaccgacccttaaaacatagcagcagttgagacagtctggccttcgcaattgtgaattatgtcaagcattagttcagtggcttgaatctactagcacatggatactagtctggtcttaacttggttcagctcagatctacgttatttgttgaaaatcggtgatcagtatctagatggagattctcatgatagagcccagatcattttactggtccagctttgtgagaatgccaaagacagagttcaatacactttacccagttgattgtgaaataacaagtactgtaaacacttgtaaataatgcagtcaatccggaccaagattgcttgagcacataccatcaacattttgttttttctgttgatctgcttatacttaggtgcatgcatgctttatgacagctgcgtctaacaatttgttctaccttggtagcatgatatcatattaaccgaatcctttacatgattatggtaatgcagcttgcggctttgaatcaactgaggaatatatttggactggcgaagtacgaagcagaagcaatcatcacagatgtcaaggctcgagtatttcagacctactaaattctttaacaatgagttggctgcgaccccaaagaaggcagagttcctccaagatatctgcgaagagttgcaatttgatcctctcaacttgcaagtaagatgcatgaaggtgccatcctgacaccttcccttgttccaccactagtttcacaacgtagctgccctgaccgccttgaaatctgggcaaattgagaactgggtttctcttggtggctctatctatatatatggtacttagagaaaataacattataatattgcaggccctattccttttcaatatctgcttatactatgtgtaaatacactctaatataataatattataataattagaggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0492300, RefSeq:Os10g0492300