Os01g0579900

From RiceWiki
Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0579900| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001049937.1 GI:115437875 GeneID:4323861| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0579900

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001049937.1 GI:115437875 GeneID:4323861

Length

2927 bp

Definition

Oryza sativa Japonica Group Os01g0579900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24095885..24098811

Sequence Coding Region

24096109..24096132,24096252..24096426,24096616..24096709,24096838..24097002,24097301..24097422
,24097959..24098041,24098208..24098326,24098625..24098670

Expression

GEO Profiles:Os01g0579900

Genome Context

<gbrowseImage1> name=NC_008394:24095885..24098811 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24095885..24098811 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagccgctctcctcctcttcccagggttcatcggttccctctgctcaggaagaaagggtagtggtaacgaataaacatggagagaaactcgttgggttgctgcagcacatgggttccaacaagattgtagtgatctgccatggctttacagcttccaagaatgatagcatcattgttgatctagcgaatgcacttaccaagaaaggggttggaatcttccgcttcgatttcagtggaaatggagaaagtgaaggggaattccagtacgggaactacagaaaggaggctgatgacttgcattctgttatttcacatcttaatcaggagaaatatgatgtgaaagcaattgttggtcacagcaaaggaggagatgtggtggttctgtatgcctctatctatgacgatgtgcgcacagtggttaatctctctggtcgatttcatttggagaaaggcattgaagaacggctaggcaaagagtttatgaatataattgacaaagagggttacattgatgtcaaaaccaactcaggaaaggttttatataaggtaacaaaagagagtttgatggaacgattgaccactgatatgcataaagcatgcctttccatcagcaaagaatgcaggtttttcacagttcacggttcagccgatgagatcattcctgtggaagatgcatacgaattcgcgaagcatataccgaaccacaagctacatgtcatcgagggagcaaatcactgctacactgctcaccgtaaagagctttctgatgccgtggtggatttcattacatccagtgaggatggggataactcgtcggcataa</cdnaseq>

Protein Sequence

<aaseq>MAEPLSSSSQGSSVPSAQEERVVVTNKHGEKLVGLLQHMGSNKI VVICHGFTASKNDSIIVDLANALTKKGVGIFRFDFSGNGESEGEFQYGNYRKEADDLH SVISHLNQEKYDVKAIVGHSKGGDVVVLYASIYDDVRTVVNLSGRFHLEKGIEERLGK EFMNIIDKEGYIDVKTNSGKVLYKVTKESLMERLTTDMHKACLSISKECRFFTVHGSA DEIIPVEDAYEFAKHIPNHKLHVIEGANHCYTAHRKELSDAVVDFITSSEDGDNSSA</aaseq>

Gene Sequence

<dnaseqindica>2680..2703#2386..2560#2103..2196#1810..1974#1390..1511#771..853#486..604#142..187#acagttctttagctacccaaaccaactctccgattagattcggcgatccctcttcccccctctcttcgctgcggcacccccgggaatcctccgatccaatccggagcacgccaccgccgccgccgctgccatacggcagccatggcggagccgctctcctcctcttcccagggttcatcggttccctgtgagtcccccttgattttttttctttttttcttttacctcccggattcatcctctttacttgaacgtggattgtttagattgctagctgacggacaagagggcgttctttttgtgtgtatataattcaatgatgttttggccaacgaaaagaaggggaagaaaaggagaagaagattatgttactccgatataataattaagggcctctcgttgttttaacttttaaaatttggcttatatgcataagcataagcgaaacaatggggctctaactctattatatggtttctaaacagctgctcaggaagaaagggtagtggtaacgaataaacatggagagaaactcgttgggttgctgcagcacatgggttccaacaagattgtagtgatctgccatggctttacagcttccaaggtgcataaatatgtcgttacagaagaaattccctttgtactattcaaaatatgtgggtcactaattttttttctcgatttttgtctgagaagcaacaagttttctaatttttagcttttttttttaccaacgtaatgaagcttgactcttggtctcttgttttcagaatgatagcatcattgttgatctagcgaatgcacttaccaagaaaggggttggaatcttccgcttcgatttcagtggaaatgggtaggttgctcatggagctagagataatatgtacgatgctgatttaagttcacaaaagctagtgttgtaaatgctattctatcctctgttaattaatttcaccggtggcattcaattttatccttttctggagttcttttcgggaatatgcataagacttccgtaactttgtattgagatttcaagtagagctttgttttcacatcagctaaactagtgaaaaagggtaagaaaaagaataacagcaattgaaggctacatctcgcggttggttgtgtgggtggaagaccaaagggtaggccatcagattggcgctcctgctgtgcgccagtgggctgcctcttcagcatccgtggcagccacttcccttttctagaggtttggttagaagttagagctaattagctaaatgagctgaggttcctatctgttgttcctttgaattttaagatgttacttgtctttcatatctacactttttttcccctgaaggcatcaatgcatgatttataagcctgtcaccatacaattttcagagaaagtgaaggggaattccagtacgggaactacagaaaggaggctgatgacttgcattctgttatttcacatcttaatcaggagaaatatgatgtgaaagcaattgttggtcacagcaaaggttcgtggcattatactcttgtttcatatacaatctatgcacgagttaaaatggtggagaacttcatggctgaatatttttctatcacattgactgtaacatcaaaacaatctactgctagaaaatactataaagtttctaaatggttagcatagcactttttctggatttttttaatttactctcactgtctcacatcgcatcccttgatcaatgaattttgccatgccttgttgcaagttctacacttggtaatcttaaaaatccagtcactgaatttaacatttcttatctccaggaggagatgtggtggttctgtatgcctctatctatgacgatgtgcgcacagtggttaatctctctggtcgatttcatttggagaaaggcattgaagaacggctaggcaaagagtttatgaatataattgacaaagagggttacattgatgtcaaaaccaactcaggtaaggaagttcctatcagttattgcgacctttacctgcaaagatactttatagataaatcatatacactgtgtatgcttacttctctttcacgcgcattagttgactgtccgtcatttccaatgtaggaaaggttttatataaggtaacaaaagagagtttgatggaacgattgaccactgatatgcataaagcatgcctttccatcagcaaagaatgcaggtcaggaagctaactcaaccgcttttacccctatattcaaataaacagcagtataagtgcttaacatagctgaacatgctattctcttgcattcccacagctgaaatattgaatgcatatctcttatgttttggacagaggtttccagttgtaccagattttgaggcaactttatttgtctttgttcaggtttttcacagttcacggttcagccgatgagatcattcctgtggaagatgcatacgaattcgcgaagcatataccgaaccacaagctacatgtcatcgagggagcaaatcactgctacactgctcaccgtaaagagctttctgatgccgtggtggatttcattacatccagtgaggtataatgcagagaaagcaatttattcacctgttgttctttgtaggcactgtctcttacagtctgtttcaacagtgttttcatatgactgaccctgggagttgctatttttgtctgcaggatggggataactcgtcggcataagatgaattgagttgtgatgggttgtttctgtacacttatagaccatttataagcttgttgaagttgccatattatccccatctgaagaatcctggatgttggccattgtgatgtgtgcattcagtatttcagtattgtttctgatttattggtttggaactgaaattctgaaactgtaccatatttgaataagcaataaagcgtcgcaataaatcttttcaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0579900, RefSeq:Os01g0579900