Os01g0580800

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0580800| Description = Conserved hypothetical protein| Version = NM_001049944.2 GI:297597072 GeneID:4324195| Length = 6084 bp| Definition ...")
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Gene Name

Os01g0580800

Description

Conserved hypothetical protein

Version

NM_001049944.2 GI:297597072 GeneID:4324195

Length

6084 bp

Definition

Oryza sativa Japonica Group Os01g0580800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24151201..24157284

Sequence Coding Region

24155745..24156638,24156890..24157228

Expression

GEO Profiles:Os01g0580800

Genome Context

<gbrowseImage1> name=NC_008394:24151201..24157284 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24151201..24157284 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagacggcgagaagagcaatggaggagaagacggcggcctgagattctccctccagtttgatcccggcaagctcggccttgaccgtgccctgctcggcctccctgtctccgctctgctcggccatctcctcggttggagcagccagggggcgtccatggcggtggcggagggtggcggcgagggcgagacggcggcgggcgtcgccgccctcgcctcagctttcgccgtctacctcgtcgcgacgtacgcgtccgatcaccggcggcagccgcagcagcctcgccgtcctctccggctgcggaagcgtgacctgtcgccgctgaattcttgtaaggaggaatgtttggagaccgtgattcacggcgcgtccgtcggagccggggacgacgagccggagatcgtggcgagagtcgtgatgcctcccgccgctgacgacgacatggccgccggagcaaacgccggcggtggcggcggcggcggcgaccgatcggagaagaaagagcgggaggaggaggaggatgaggaggtggagaggctgaaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggcaggcggagctcgacgagctccgggagcaggacgccacggcgcgtgagctcgatcgccgcgccgccgccgcagccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaaccgtcgcctggaggaggcgcgggcgtcggagctcgacgccgtccgcggcaagctggcgcgcgccagggagaagctggcagagctcagggcgcgcgtggagcgcgagcgggaggaggccgcgcgcgaggcggcggcgctccgtgccagggcgagcgcgctggagaggagcggcgcggagagggaggtcgccgcggcggcggaggccgcggcgctccgggacagggtggccgggatggagaaggacggcgccgagagggagggcgccctggcagcggaggcggaggcggcgcggcggaggatggcggagctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcgggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggcagagcagacagcctccacggttaatctcgttatcgaggtaactgaactcctcttgtttttatttttacatttttttttactctga</cdnaseq>

Protein Sequence

<aaseq>MEDGEKSNGGEDGGLRFSLQFDPGKLGLDRALLGLPVSALLGHL LGWSSQGASMAVAEGGGEGETAAGVAALASAFAVYLVATYASDHRRQPQQPRRPLRLR KRDLSPLNSCKEECLETVIHGASVGAGDDEPEIVARVVMPPAADDDMAAGANAGGGGG GGDRSEKKEREEEEDEEVERLKELWLSLMEREQRLQLRQAELDELREQDATARELDRR AAAAAAVEARMLELKAASLREENRRLEEARASELDAVRGKLARAREKLAELRARVERE REEAAREAAALRARASALERSGAEREVAAAAEAAALRDRVAGMEKDGAEREGALAAEA EAARRRMAELEKNVEEREAAMAAEAAALRAANAGLEEENMELALRLQEAEQTASTVNL VIEVTELLLFLFLHFFLL</aaseq>

Gene Sequence

<dnaseqindica>647..1540#57..395#aagggccctggtggtcatggggaattggggagcagtgcaaatggtggcttgagaggatggaagacggcgagaagagcaatggaggagaagacggcggcctgagattctccctccagtttgatcccggcaagctcggccttgaccgtgccctgctcggcctccctgtctccgctctgctcggccatctcctcggttggagcagccagggggcgtccatggcggtggcggagggtggcggcgagggcgagacggcggcgggcgtcgccgccctcgcctcagctttcgccgtctacctcgtcgcgacgtacgcgtccgatcaccggcggcagccgcagcagcctcgccgtcctctccggctgcggaagcgtgacctgtcgccgctgaattcttgtaaggtttcgtttcttggatttttcttttctagcttgctcttgtggtgtttggtttgttttgtgatgatgattttttgttttgtctgtagcagctaggcctcgtgctctgcctacaccggatgatggtctccggattctttcgtcgaatgtaagttgcgatcttacgaatttcatcagttcttgatcagtggaaatttttcctgaattttcggaaggaatgaatttgaggtgtgattgattcttcggtgtgaaaggaggaatgtttggagaccgtgattcacggcgcgtccgtcggagccggggacgacgagccggagatcgtggcgagagtcgtgatgcctcccgccgctgacgacgacatggccgccggagcaaacgccggcggtggcggcggcggcggcgaccgatcggagaagaaagagcgggaggaggaggaggatgaggaggtggagaggctgaaggagctctggctgtcgctcatggagcgggagcagcggctgcagctgcggcaggcggagctcgacgagctccgggagcaggacgccacggcgcgtgagctcgatcgccgcgccgccgccgcagccgccgtggaggcgcggatgctggagctgaaggccgcctcgctgcgggaggagaaccgtcgcctggaggaggcgcgggcgtcggagctcgacgccgtccgcggcaagctggcgcgcgccagggagaagctggcagagctcagggcgcgcgtggagcgcgagcgggaggaggccgcgcgcgaggcggcggcgctccgtgccagggcgagcgcgctggagaggagcggcgcggagagggaggtcgccgcggcggcggaggccgcggcgctccgggacagggtggccgggatggagaaggacggcgccgagagggagggcgccctggcagcggaggcggaggcggcgcggcggaggatggcggagctggagaagaacgtcgaggagagggaggcggcgatggcggcggaggcggcggcgctgcgggcggcgaacgccgggctggaggaggagaacatggagctcgcgctgaggctgcaggaggcagagcagacagcctccacggttaatctcgttatcgaggtaactgaactcctcttgtttttatttttacatttttttttactctgatgcaatctctctcaatttttttttttttgcatttaggattgatatatttttcttgtgtagaattatgtcttggaatgttaatgatgatgagtgtttacagcttttgacaagtgatgaaaataataataaaccaactaaaagatatattatttgaagaacaagtaaatgcaataatttagttatctggatatttttttatgattgaaaatatagctcttgacttatgaatggtttgaagtaataatttaaattattaagcgtaagttattattataatctagattattagaagtaggctgaaataaacagatagttttataatagattactacaatctataaaccatattagtataatatggtaatccactttaaaggaatatttttagattattaggtggctaacagctaacaaacagctaataattcaaagaaaaaaattagctaacaacttataatccagtttatagtaatctggctcaataatctaggttataataattttaagctgaaacaaatacagtcttacttgtttatgacttttgcaattttgtggcaaaatggccttcgtcgtctccttttggtttggaataaaagtaggggctgaaaattgtgccaagtattcctttgataatgtcactatcacagctttaatttaactcaaaggttgtaaggttgttttagcgaattagccttcgacatccttgatgctaaggtcatcgactcatggttagagcttagaaccttcagcgattgaattattgcttgttactaacttattcagacaatagcgtgacacaattaaacaacaaggtaagcgattagtttatgttatggttttttaatttggttactataatttggttactataccaaacatatcagtccttcaattggttggtaggcaaaaaaaattggcataccaaattatttggcttagttgaattaggcccatatatggaaacacattttggcagtaaccaaacaagaatctagctattttttaccaaaataattggtagtaactactaattcttgccattgctaaaattttggtaaggataagattagcaaagtatcaacatgccctatgatccaagcaggaacatttagtcatctactcttgtaagaagcaaatttgattctttcacccaacctcttttttttttaactatcctggatttccgtttgttaaatcaatcagattgttttattttcatttttttttctattctgaatttgtgttgcttagctaaatgggattattgttttcttcctgatttcatttattaatgctatgctcaaactgataatccccaagataaatacttgatgtttatgataaaatttgattaaaactttatttttatattaaaagataagtattaactcaataagtgtaatggtaaggtcaaccaacgtatataatttattttgtttaaaaactaagcatgagtattatttctcggattttttttaagcaatatcgaatcttgtcttaaacattggaggaagtatattgcaaatgccagatcatatatttcaagttgtaaaatcttttggaaaaccgcctaaaaaaataaaccccatcttttcgcctacattattagattacaagctgtagcattaattagcgactgaaaaaccaataccgaaaataaactacagtaaaaaacatcaaaatcaaccgtaaaataagatttgaaatttaattgttagatgtggttgataaggtgaagagcaaacgatggagctccttgttatgattttcatgaattccttgttaccatttgacgaggtacctcaagctagcttgcctttttttcctaataagaaaatacgagtaactctagagagaaaaaaaaaggtaattctagtttattggtaaaaaaaatatagaactggtgccactgttggggaaaaaaacaacgcaaatatgccaccttttagaacaaatagaacatccgcgctctgcaaacttttgggacctcatcttttcgcatatgcttatgcttatcagccaattacttttcatttacaaatatgtcgtttcccttgctacacacacaatttttccaagaacttggtgatacactgccttttgcaactgtcaatttcaagccaaactctccaacaaaacaccagtatggcctctctaaaatagactctctaaacatccatatggccagctatccatcatttgatttagcaagtcaaagtcgttgctcgctccaacagcctctctatctaccctctattacaagtctattacaaatgagacccatttgtcaatctctactacccttcttcctcctcttccacccccattttccccacccatactactgccgacctcctccccacaccctctccgatgcaacgacggcggatggcggtgcaataagcggcggcggcggggaggcgggctgcagcgagcggaggcggcgggggcggtggactgcggcggtggcggctgcggcgagcggaggcggcgccgcgccggtgggctgctgcgagcggaggcagttggctgcggtggcgactgcggcgagcagaggcggcgggtgcagcaagcggaggcgggctacggcgagcgaaggccggcggctgcggcgaggggaggcggggactctcccctcctcctcctcctcctaccactcgcctccgccaccgcgtcctctacgaatctcgcgccgacatgccgcccccgatccacctctccgcggcggccctctcgcggccggcgaagtgccgagagctgaggcggtagtgccggatgtggccggccgggagcgaaggcggcaacgcttctgccgggggagcagcgcaagagggatggggatgaaggcggcgccggcgggagcggtgcgggcggcagaggacgactggagcgcggcgcggggatggaggcggccacatcctgcgagagcccgccgcttctcggcccagcgtcctgctgcggtggccgtctctcatcggagctctgctcgtcggtgcccgcgcgccgcaccattgaagtcaaagagagaggagagattggggtggggggagcaatgtggggcccaccactagcaactggtttggctaggcaggcaggatggccaaatttagctagctaaggagccaatttggccagctagatggcttggccagctggatagagtctgttagagtgctttttcctcctaaatttgctagaatgtcatctagccattctctcttggagatgctctaaaatagtactcaatcatggctatccttttaaaatgacaccaaagctcatgtctttttttcttctttttttttcacgtaggaggacgtggttaaggaggcaaaatacctgagagagaccaacgagaggctgacgcggcagatcgagcagctgcacgccgaccactgcgcccacgtcgaggagctcgtctacctcaagtgggtcaacgcctgcctccgctacgagctgcgcacccacgacggcgacgacggcgccggccggatttcggcgagggacctgagcaagagcatgagcttccggtccagcgagaaggccaaggagctcatgctcaagtacggcacccatggcctcgacggcttcgacccctccatcttctccccgctccacgagtccgtctacggcgacggcgacggcgacgacttcgagcagcgaagaccgaacggcgacgtcgtcgtcgacgaggcgccgcggagcccgagcacggcggtggcgatggccgccgcagctgcgggggccgagtcgccgtcgagacgtggcaacaagctcaagttcttggggaacatcaagaagctgctcccgaccagcaagaaggggcacggccgcggcgaccggaggagcagcaggaagcagtcggcggcggcggaggcggagccaccgcgggacgagcacctggagaaggcgctgcagtggctgtccagccacgacgtgctggacgacgacgactcgtacgagagcacgccgctgtcgtcgtgcgagcggacgccgctgagcagcgtcacgacggcgggctccacgcacgcccgcagcaccggcggcgccgccggcgagacggccgccgcggccgcgtcgaggctgctggaggcggagacggcgcgggcgaggagcgacgtcggcgcgtcgtcgtacgggcgggaggcgccgagccggtaccacgcgctccggccttaccaccccggcgccggcgcaggcaatgtcggcggcgacgggccccgcgcgtcgccggagaagcgggagctgaggcggcggtcggaggagctgagaagccccgcgtcgatgttcgcgggtgcaagggataatcgcatgcatcagctgcagagcaatgcttaattaaccactactactattactgaagtatttacagattaacagaaacctgctgcatatgcgagatgggatataatgcaagtttttttttctttttcccctgcttgtgtttatgcgtgtacgaactggtaattaatactggatgttagaagggtttgtgacttttgatcttggattggtgaagaaaatgatgcgttaggatttggtct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0580800, RefSeq:Os01g0580800