Os01g0583200

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0583200| Description = Zinc finger, U1-type domain containing protein| Version = NM_001049951.1 GI:115437931 GeneID:4324202| Length = 2782 ...")
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Gene Name

Os01g0583200

Description

Zinc finger, U1-type domain containing protein

Version

NM_001049951.1 GI:115437931 GeneID:4324202

Length

2782 bp

Definition

Oryza sativa Japonica Group Os01g0583200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24282102..24284883

Sequence Coding Region

24282349..24282411,24282533..24282646,24282741..24283188,24283787..24283914,24284482..24284556
,24284689..24284775

Expression

GEO Profiles:Os01g0583200

Genome Context

<gbrowseImage1> name=NC_008394:24282102..24284883 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24282102..24284883 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtggttccagtgcgaggactgcggggacgacctcaagaagcccaagctcgccggccacttccgctcctgctccgcctacaggctctcctgcatcgactgcggcgagttcttcacccaggagaccgtccagggccacacccagtgcatctccgaggctgagaagtatggtcccaagggacagaacaaagcatccaacaatgcacagggcaagcaagacaagccaaagccaaatgctgatgttgatatcaatgtcgggctgtcgacatatcccccttggttctgcagcctttgcaagacgacaaccactagcaagcaaacactcttatcacatgcagatggcaagaagcacagggcaaaagcaaaagcctatcatgcttctcagaagcaagcaaatggagttgaacaaactcccaaggaaactgttggtgcacctgtgacagaatcagcacaagtaaacaatgagaggagtactgaaaatgaaagaggtgtggacaacgatgcagcaaagagaaagagagcaaatgatacgacctcagaagagccagataacacgaaaagacagaacaacttgagcgtgaacagtggagaagtggtacaatcttcaaatgaagaggcagaaaccaaagcaaagagcaagggtactaaagatgaattagttagtagtgccaaccttaaaggcagtaaaaagcagaaaatcaagtggaagaaaattattaccaaagtacttcagacgaatccagatggagttctgaagttaaagaagctacaaaagctagtaactaaggaacttctggaatgtggtctgacagaagataaggagcagatgcacgctatcttgatggataagatttcttcaagctccaggttttctgttgatggcaagcgcattagattggttgcaaaggattga</cdnaseq>

Protein Sequence

<aaseq>MVWFQCEDCGDDLKKPKLAGHFRSCSAYRLSCIDCGEFFTQETV QGHTQCISEAEKYGPKGQNKASNNAQGKQDKPKPNADVDINVGLSTYPPWFCSLCKTT TTSKQTLLSHADGKKHRAKAKAYHASQKQANGVEQTPKETVGAPVTESAQVNNERSTE NERGVDNDAAKRKRANDTTSEEPDNTKRQNNLSVNSGEVVQSSNEEAETKAKSKGTKD ELVSSANLKGSKKQKIKWKKIITKVLQTNPDGVLKLKKLQKLVTKELLECGLTEDKEQ MHAILMDKISSSSRFSVDGKRIRLVAKD</aaseq>

Gene Sequence

<dnaseqindica>2473..2535#2238..2351#1696..2143#970..1097#328..402#109..195#acaaatcccaattgccgctgcgtccttcgcctcgcctcgcacccaaaaccctagcgccgcccgctcgtcggaggtgaagaggcggcggcggcggcggcagcgtcgacaatggtgtggttccagtgcgaggactgcggggacgacctcaagaagcccaagctcgccggccacttccgctcctgctccgcctacagggtttgctctccctccccccctctctctgatcttgctcgtctccgaagtgagcagagtctcttgatcgtctcgaggtgagagaagtggtggattgtgattgatttgtttgcgatttttgtgttgcggcggcagctctcctgcatcgactgcggcgagttcttcacccaggagaccgtccagggccacacccagtgcatctccgaggctgtgagtacaccttccccatatgcccgtttcttgattgctcattaagtactagtgaaacgtgattcgtttggtttgcacatgtaacctgtgtttgaattagtgtcgaattgaatggtattggattggaaatgtttcatgctattgcttatatggtgaggccaggtcgaattgctttcatttctttcattcgatttagtggatagtagggattaaggtggaatttgtgaattctgacaatttcattatgttctaattagtaaactacagagatcagggtgatttggttctatttggttgggattggatctgattattgtgaaatcgatcggtcaaacactgtcttatgctttgaaagtctattaatgtaatccactcagacactgagtaggtctgtactaagagtatgttccgtcaaaatttactgagcagttgagctccacatcacacaggtcttatctgaattctttgagggatgtttaactctcggagatgattctatttgttcagattggctatagattcatgtgtaaattgtgctttgaatcttaatgctgcattccctttcaggagaagtatggtcccaagggacagaacaaagcatccaacaatgcacagggcaagcaagacaagccaaagccaaatgctgatgttgatatcaatgtcgggctgtcgacatatcccccttggttctgcaggtttgctaatttcaccgtgcaacatattaatagttacatttgcagatggttctgtagtggaactgtggaaacagcggaagccatgtcccatcatgttagctctggacattctatattttaaaatgttaaggtgtagagtatgattaatgtttgtaccttgtgttttacgtgcattggtgcaaccatagagaaacaccttgctttgttattaaggtgattctttagtatgtgaggtgtgattgtgtctataacactaatgaaacaaatgtgatgtttttttaagctgcaattgtctacgcttaacatcatttttgtccttgttttttctactggttgtagctacaaccgtataacacttactcttagagctagtattggtcatccaattattttggaaagacaatgtcagagttacaaaaaaaataggtcatcattctttagataaacaatctcgtgtttgtccttgtagccaggccatatcagctgaagcagcattcactagtattcattgttctgggtcgatatttattaggtcttaattcaaatactctgtggaaacgtttaaaaactttgcacttattgtggatttgtatcacagcctttgcaagacgacaaccactagcaagcaaacactcttatcacatgcagatggcaagaagcacagggcaaaagcaaaagcctatcatgcttctcagaagcaagcaaatggagttgaacaaactcccaaggaaactgttggtgcacctgtgacagaatcagcacaagtaaacaatgagaggagtactgaaaatgaaagaggtgtggacaacgatgcagcaaagagaaagagagcaaatgatacgacctcagaagagccagataacacgaaaagacagaacaacttgagcgtgaacagtggagaagtggtacaatcttcaaatgaagaggcagaaaccaaagcaaagagcaagggtactaaagatgaattagttagtagtgccaaccttaaaggcagtaaaaagcagaaaatcaagtggaagaaaattattaccaaagtacttcagacggtaggacttctatacaacaaacactgctctatttttgttttgtgtttgtgcttaaattatccggcggttgacagttctccttttaccctttcagaatccagatggagttctgaagttaaagaagctacaaaagctagtaactaaggaacttctggaatgtggtctgacagaagataaggagcagatgcacgctatcttgatggataaggtagtacaatgtcaaaaaaattgtagcttacttgcctgtaattaacttgttctccttcagtatttgtcaagatgtgctgttgataagtgacagaaaatgatgaactattactatgtcgcagatttcttcaagctccaggttttctgttgatggcaagcgcattagattggttgcaaaggattgagagtaatggatcatgccccctgacagctgattccttgtcgacagatcaatgatggtcttacagtttgttatggcgtaaagccgagttttggttctattatttatacactgtactgcctggatcatccatacgatccgtggaactgatgtgaattttgcatttgattgttttgggagcaacagccgatctgatcgcaaactgatcttggcaacacggcttgctatcaatgacatcaatatttcatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0583200, RefSeq:Os01g0583200