Os10g0492500

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0492500| Description = Similar to Tonoplast membrane integral protein ZmTIP3-1| Version = NM_001071467.1 GI:115482677 GeneID:4348980| Lengt...")
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Gene Name

Os10g0492500

Description

Similar to Tonoplast membrane integral protein ZmTIP3-1

Version

NM_001071467.1 GI:115482677 GeneID:4348980

Length

1788 bp

Definition

Oryza sativa Japonica Group Os10g0492500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19157753..19159540

Sequence Coding Region

19158368..19159177

Expression

GEO Profiles:Os10g0492500

Genome Context

<gbrowseImage1> name=NC_008403:19157753..19159540 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19157753..19159540 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcccgaacgtcatcgtcgcctccagcagcaccgcgtgccagtcccccacccccgacgccagtgcgaaccccggcggccgctgcacgacgtcgccggcgacggcgacgagaaggtatcagagaggaagcttagctagagagagacatcaaggtatatgtacgtaccatgccgccggtggtgaggcggaggaggagggtggcgacgacggcgccgaggagctgggcgagccagtagaagagggcgcggatgagggagaggcggccgccgaggagcgcgccgaaggtgatggccgggttgacgtggccgccggagatgttgacggccaccgccaccgccaccgccagcgccagcgcgtgcgccagcgacaccgccaccagccctcccggcgtgctcatgtcctggtacagcttccctgcacacacacatcgccatgccacatgtcactcccgcgcgccgccgcggctgccatggatggaagaaattatcaagaaacgagtgtgtatgtagtgcgtaccgagggagaggatggagccctcggcggcgaagacgaagatggcggtggcgaggaactcggagatggcggcgcggatggtgtccgggtgcgtcgcgtcctcgctccgccccaccgtgaaccgccgccctggcctcgccgccgccgtgctcatctccacaccgatcactcactctcactactcaccaactctcgccgccgtccggtccgcccaccgccgccgccgccgaagccgcgccttatcctagctagcctcgtctcgatcaccaagtgcgcagtacagttgggggtgtga</cdnaseq>

Protein Sequence

<aaseq>MSPNVIVASSSTACQSPTPDASANPGGRCTTSPATATRRYQRGS LARERHQGICTYHAAGGEAEEEGGDDGAEELGEPVEEGADEGEAAAEERAEGDGRVDV AAGDVDGHRHRHRQRQRVRQRHRHQPSRRAHVLVQLPCTHTSPCHMSLPRAAAAAMDG RNYQETSVYVVRTEGEDGALGGEDEDGGGEELGDGGADGVRVRRVLAPPHREPPPWPR RRRAHLHTDHSLSLLTNSRRRPVRPPPPPPKPRLILASLVSITKCAVQLGV</aaseq>

Gene Sequence

<dnaseqindica>364..1173#acacacacatagctaatagatattgtagctggaggtcgccggcggcgggtctagtagtcctccggcgccagcggctggtgcgcgccgccgtgcggggcggcgtcggctgacgggatgacgaggtactcgtagagaagcccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgccagccgacgagcgccgggccgaacaccctcgccgggttcatcccggcgccgtcgaacgggcccccggcgagcatgttggcgccgaggaggaagccgacggcgagcggcgcgatggtcccgacgtgcccgcgcttcgggtcgatcaccgtcgcgtagtacgcgtacatgagcccgaacgtcatcgtcgcctccagcagcaccgcgtgccagtcccccacccccgacgccagtgcgaaccccggcggccgctgcacgacgtcgccggcgacggcgacgagaaggtatcagagaggaagcttagctagagagagacatcaaggtatatgtacgtaccatgccgccggtggtgaggcggaggaggagggtggcgacgacggcgccgaggagctgggcgagccagtagaagagggcgcggatgagggagaggcggccgccgaggagcgcgccgaaggtgatggccgggttgacgtggccgccggagatgttgacggccaccgccaccgccaccgccagcgccagcgcgtgcgccagcgacaccgccaccagccctcccggcgtgctcatgtcctggtacagcttccctgcacacacacatcgccatgccacatgtcactcccgcgcgccgccgcggctgccatggatggaagaaattatcaagaaacgagtgtgtatgtagtgcgtaccgagggagaggatggagccctcggcggcgaagacgaagatggcggtggcgaggaactcggagatggcggcgcggatggtgtccgggtgcgtcgcgtcctcgctccgccccaccgtgaaccgccgccctggcctcgccgccgccgtgctcatctccacaccgatcactcactctcactactcaccaactctcgccgccgtccggtccgcccaccgccgccgccgccgaagccgcgccttatcctagctagcctcgtctcgatcaccaagtgcgcagtacagttgggggtgtgaagcagctggatctcgtcggccatggccgcgtcgcggtgagcttataacgtggcggagccgggcgcgcgcgcgcgacacgtgtgcatgcgcgcggggcgaagcggtggcacgtctcgccgccgcgacgatgcgtgcgtgagttcgtgttcatctctatcgcggggggagtggggcccacatgacaggtcaccgccacgtcacgcacccacgtacggacgcgccggggagtaggtatcgtctcggcgtctctccttcaagcgatgggcgcatctgatgcatggatgggaggatgcatgggcaacgctgtgctcgcggtcgatgagacaaaatcataaaagagctttgattgatttgatttggaagtgcttaggttcgtcttgtgattaaatgggaaggggttgaagtaatgatgtggatttttggctttaatttggttttattagccggtaaatggatgagttcttttttttttagggggggggggggttgtttgggtgatttgcaagtttagttttgctttaagttgttgattctttcttcttcttcttcttcttcttcttctggtttggagggattagtattgcttaaattggactaaatgacgtggatttagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0492500, RefSeq:Os10g0492500