Os01g0588700

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0588700| Description = Protein of unknown function DUF572 family protein| Version = NM_001049972.1 GI:115438015 GeneID:4324443| Length = 52...")
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Gene Name

Os01g0588700

Description

Protein of unknown function DUF572 family protein

Version

NM_001049972.1 GI:115438015 GeneID:4324443

Length

5232 bp

Definition

Oryza sativa Japonica Group Os01g0588700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24588801..24594032

Sequence Coding Region

24589030..24589227,24590170..24590319,24590414..24590548,24590649..24590714,24592254..24592319
,24592439..24592528,24593149..24593230,24593438..24593643

Expression

GEO Profiles:Os01g0588700

Genome Context

<gbrowseImage1> name=NC_008394:24588801..24594032 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24588801..24594032 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgagcgcaaggtgctgaacaagtactaccctccggacttcgacccgtcgaagatcccgcggcggcggcagcccaagaaccagcagatcaaggtgcgcatgatgctccccatgagcatccgctgcggcacctgcggcacctacatctacaagggcaccaagttcaactcgcgcaaggaggacgtcgaaggcgagaaatacctggggatacaaatatttaggttttacttcaagtgtacgaaatgttcagctgagataactttcaaaacggaccctcagaattctgattacacggtggaatctggggctagtcgcaattttgaaccttggcgtgaagaagatgaggtagcagacagagaaaagaggaaacgagatgaagaggagatgggtgatgcaatgagagcattggagaatagagcaatggattcaaagcaggacatggatatacttgctgctttagaagagatgcgatccatgaagtctagacatgctggagtcacagttgaccagatgcttgaaattttgaagcgctctgctcatgataaggaggagaaaacagtagctgagctagatgaagaagatgaaaaacttatcaaatcaatcacttttcgaaactcccaagattatgtaaaacggatagaggatgatgatgacgatgatgaagatttggtgataccgggccagtcgagtagcacatcaaagatgaatggatcctcccagtcagtatcaaatgcaacagatgtcctgaccaagactagtggatctgataatgccaataaagaaggaaataagatctggccatctaagatgccaaaatttatagtcaagccaaagtctacccctacagatcctatcaagaaacagaagacggaaaccacggctggcccggatactggcaaagcgccagtcgcagaagaaaatagtgagcctgcgcagaacaatgtcctccaatccctctgccaaaactacgatagcgatgaaagtgagtga</cdnaseq>

Protein Sequence

<aaseq>MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIRCG TCGTYIYKGTKFNSRKEDVEGEKYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVES GASRNFEPWREEDEVADREKRKRDEEEMGDAMRALENRAMDSKQDMDILAALEEMRSM KSRHAGVTVDQMLEILKRSAHDKEEKTVAELDEEDEKLIKSITFRNSQDYVKRIEDDD DDDEDLVIPGQSSSTSKMNGSSQSVSNATDVLTKTSGSDNANKEGNKIWPSKMPKFIV KPKSTPTDPIKKQKTETTAGPDTGKAPVAEENSEPAQNNVLQSLCQNYDSDESE</aaseq>

Gene Sequence

<dnaseqindica>230..427#1370..1519#1614..1748#1849..1914#3454..3519#3639..3728#4349..4430#4638..4843#gaactccccatcgcctcgcccgcggattctcctcctcctcctcctcctcctccttcctcgccgccggcgacgcgccgccggctaccttttgacgctccgaccgtggtgccctttttctgtgggacccgggatcctagctcccctcctcccccgacgattcccggtcgcctcggcggctctcctcccgtcctagggttccggcgaggtcccccgcggctgcgccggcgagatgggtgagcgcaaggtgctgaacaagtactaccctccggacttcgacccgtcgaagatcccgcggcggcggcagcccaagaaccagcagatcaaggtgcgcatgatgctccccatgagcatccgctgcggcacctgcggcacctacatctacaagggcaccaagttcaactcgcgcaaggaggacgtcgaaggcgaggtaggttggccgtggttgctgatttgagttcatacacgcttccgttagccgtttacttacgctaatttactgcgatgtttgcttgttttgtttggcatttgtactgatcaatgtcttagggcctttaggcatagcttgttatctatcttttttgcttctgagaatcagggttgcgcaacatagcttaaatctctctgtggtctttgtattatatttaccatgataaaatgctctagtagtatagtgtttgccatcgatatgcggtgttaatgctgaatgaagcattgagcactccatgttcgctgttgcctgcctaagccatgtagcccctgatgtttatgtgatcagagctgaaatggttgccaagtaagtgtggacttaatcgtgcaattgaagacaaaaggttaaccatttaactgtggacttaatcatgcgattcagaactgtggaattaaaaccatttttacactgttacttggcaaccatttcagctactgtggacttaatcatgcaattcagtatttcagaagatgcttataaattttggttggcctttctggtcaaaatatgtgcttgctattcgggattgtgcactttctttctatagtagcttctgtactactctgcatcttgtgctcctctttattgctttactggagagagttggcatttacctttcttttacattgaatactgactatatcctcataatgttttatattttctcaacatatagttaaaacacaacagccttttttgccatctttctgctgtcgttaaacttttaaccatgattggtaattcattgttgtacggcaaagcgtgagcttttatctggttattctgttcttttgtaattgtagaatttcataccaatggtgtatctgggctgctagttttaatgctaatttatgctaatgtgatttcatttcttgtgtgcagaaatacctggggatacaaatatttaggttttacttcaagtgtacgaaatgttcagctgagataactttcaaaacggaccctcagaattctgattacacggtggaatctggggctagtcgcaattttgaaccttggcgtgaagaagatgaggtgggtgatccagggcatatcttaggcacatcttatttgtttcgactaatattatattgaaagtgacaatgacgatgtatattccttttttcaggtagcagacagagaaaagaggaaacgagatgaagaggagatgggtgatgcaatgagagcattggagaatagagcaatggattcaaagcaggacatggatatacttgctgctttagaagagatgcgatccatgaaggtagaatatggtctatgggcatctgttcttttttctgtaaataaaaattgaaataagtcggacttagtgtgctgacattgttttcttgtgccttttgcagtctagacatgctggagtcacagttgaccagatgcttgaaattttgaagcgctctgctcatgataaggtaagatctcaaaataattcttttgcttttgtttaatgaatgaacaagtcattgtagcccctaaactatctcaagaatcaatcctcaactatgaaactgtccagcattcaccctctaactcctaaaactagactaaataaccccataactctggttttagtggtggcttttgccatgaggtactagatgcttgctgttggtgccattatgaacctccacctcagcattactcttcatgtacatgaaaacatgatataacccagcaaaatcttctcaactttcttcgctatacctgcttcttgtggtcgtttctggaagcagtagcaaacttgatgttactactcagtaggaaaccttgggttttaggtgttgggagtcgaggatctggccttgtggccttgttgctgctaggatgtagagcgatggtgaaggatcaggggcagcggtgacagctagacctgtggattaggaggccatatcaacgggtgaggtgttggtgttggttggctacctcttctgtcatagatgtttatgatctgcatgacccagcaaaagggagcaatgtagctttgatctgaaccgctaaaataaaaatcatgaattgtcttgttattaattggatggtggatttaatctgcacttggtgaaaagagtcaggaatctccatgcgaataaattgaattggaactagccagatttggaaaacagtacatagatgatagaattgaccttgacgattgagctgatatgcttgccctgcaaccgtatgatattcatggtaatttacctgctgggatgcttgtgctcccacaaccatgtacaccttgtactttaccttctgcccagcagcttgcactctgctcaccggggtttcaacatgctgtgttagcagcattgggactagtaggtttgtcatgtcagtgtgatgtaaaggtgatggttgcttgaagctgttttgttagacaggcaaaggacagcgtgaagataagagagtagaaagaagcagcacagggtgactttttttcctgttattatttaattatttaacttagatatgttttccaccacatagatgccatgtcagcatgataccaggtactccctccgtttcacaatgtaagtcattctagcatatcccacattcatattgatgttaataaatctaggcatatatatttatctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatcgtgaaacggaggaagtagtatggagtggtgggctatcactcccgttctgttttgaagggtgaactttaaacaattctgttgttgagggtgaaaacagaccttttcctttaaaaaatgtttgacataggatagttcaagagggagaaaacataacttttcctttaaaaaatgtttgacataggacttttcatctttttggtaatatttatgatagcttccttacaagcatgggtggccatggtgtgtaatctgcctgcttaaatctcgcattgtttttctaacggtgataattttgggcaatgacaggaggagaaaacagtagctgagctagatgaagaagatgaaaaacttatcaaatcaatcacttttcgagtaatcctctacctcaacttacatacatccctgcatgtgcaaaactgtgtagagagagaagttacttcgtacaaattataaggcatttttttaacttgtgatcctattatttaatgcagaactcccaagattatgtaaaacggatagaggatgatgatgacgatgatgaagatttggtgataccgggccagtcgagtagcacatcaaaggtacttagcactcctgtttgatcttgtaggctccatattcttaacctccagttacagtaaaaatcattggacattagctggcattcacatattaccaaactagccctggcagatccattaggtactaaagcttgctaagcttttatttccatccccctttgtcatttaaactgtaaagtattcagctttttcttaatagacgtattggatttcttaaatagataatacctgcactttgagcactgaagctttgttctggttggaaaattttttagcatatatttttagttattagatttaatgaacagttggagctagggtagaaggccatttgaacataagtccaatgataatggtaaattttggtcaccaagcagcagtattatgcaaattggtagcaaacattggcatagtcatttaaaactattattttttaaaacttaatttaaaactattgttttggagtagacattgttgtagcattttcagaattgcttgtgtcagtctcaagagtttactggtcaattttctatgctaatgtagagttattttcttatgcttccatttgatgtctcttgaatttatttgctttgttgactaacagttctattgttctgtagatgaatggatcctcccagtcagtatcaaatgcaacagatgtcctgaccaagactagtggatctgataatgccaataaagaaggtaaaaactaagcagcatatttgtttttatcatgattatcgttatcctgaattcaaagtgttacattttttccccgcaatttggcagggatcgtgtgttattcccttttcttgattaagcagcgttctattttggaaacaaatgggctgcccgtgttctttatctagttattaccgcgtgttacttaccattaaatatgcactgcaggaaataagatctggccatctaagatgccaaaatttatagtcaagccaaagtctacccctacagatcctatcaagaaacagaagacggaaaccacggctggcccggatactggcaaagcgccagtcgcagaagaaaatagtgagcctgcgcagaacaatgtcctccaatccctctgccaaaactacgatagcgatgaaagtgagtgatgactgcgtggctgcttcgtgccgtaagcccgtaacaaccgtaaccgcgaatcgccaccaactgctgtggcattggttgcagcggatgacaattccactcacagaagaagaatattacgttgtgctaacattggataaccagatccctgaggatctattgttgccacaaatctgaatcccgggaattcattggttaagtatatacagtacttcaaaatctgtggctgctaacattgtccaggcgagatttatacgtgtgtggtttgttgctgaatgcctgaagagatcaaaagtcttgtaaaattgacagggaagatgtttgttgacgttgggttcttgcaccaatccttcatttctacgcctagcttatacacaacacaaatttgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0588700, RefSeq:Os01g0588700