Os01g0590200

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0590200| Description = Conserved hypothetical protein| Version = NM_001049983.1 GI:115438059 GeneID:4324455| Length = 2947 bp| Definition ...")
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Gene Name

Os01g0590200

Description

Conserved hypothetical protein

Version

NM_001049983.1 GI:115438059 GeneID:4324455

Length

2947 bp

Definition

Oryza sativa Japonica Group Os01g0590200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24680016..24682962

Sequence Coding Region

24680325..24680861,24681576..24681757,24681876..24682112,24682195..24682254,24682515..24682683

Expression

GEO Profiles:Os01g0590200

Genome Context

<gbrowseImage1> name=NC_008394:24680016..24682962 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24680016..24682962 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcgtcgccggagaagaaggatcctcctagttgtggctctcgggattcccagcccatcccttgcacggacgatccccccttgtctgaatccccaacgacggacctaggctgccacgatccgcgcgacgaggacgccgaccacccggcaccacccatgggcaaaggtgacatcgacgaggatagtgatgatgatggttacgcagacgaggagacaacttgcccagggcagaacttcacgaaggagcaggcaaaggaaataattcgcaagtggctagaaacatacgacaagaggaatagagaattcatggtggcgtgcgaggagttccaaaagcagggaggggatgagacgagtgcttcttgtccagtatttcctttgaaaccgctcccggagacaacagatttctgtaccaccaagagtttgtgctatcaccgtgaatacaagaccaatgatacttctgagactgcatctactattgggtggcttgaacccaaggagatgctccagatcttctctttgaggttgtccagctccatgtcctatcctattagtgtttacggaatctttgcagtacgtgattacttggaccctttgaggaattatgtcttcaaccgtaccagagatgatcctgtcatagttgaacaggattccttcacattacctctttgcagcccttgtcgaggaatgtatgtagtagaatatgcattgtttgaggttgatctttgggtgaaaatggaaggtggagtatctaatgacaagcaattagtatccgcgtatgtcgagatttttgcccgtggcgtgtttaataaggagataagggggcggatattaagcgaccattgctatctggacatacactatatgtatctttcacagagtattgaagctgtcatacaagtatccacagagattgacagtaacgatcctcgtcatgtgagattcactgcattttgtagtggctttgaccgtgagattttgctgttcaatgggaaattctgcaaggacaagtctttccagcacattgtggcaatgaagtccaagggaaaactggttgttcacttggagtttgagggatccctgttttgctggacttttaacaatggtgagcttggagctgttaattctcccgatgattcagtcctgaagcaatttcatgtcagggtgttgttttctccaaaataa</cdnaseq>

Protein Sequence

<aaseq>MASSPEKKDPPSCGSRDSQPIPCTDDPPLSESPTTDLGCHDPRD EDADHPAPPMGKGDIDEDSDDDGYADEETTCPGQNFTKEQAKEIIRKWLETYDKRNRE FMVACEEFQKQGGDETSASCPVFPLKPLPETTDFCTTKSLCYHREYKTNDTSETASTI GWLEPKEMLQIFSLRLSSSMSYPISVYGIFAVRDYLDPLRNYVFNRTRDDPVIVEQDS FTLPLCSPCRGMYVVEYALFEVDLWVKMEGGVSNDKQLVSAYVEIFARGVFNKEIRGR ILSDHCYLDIHYMYLSQSIEAVIQVSTEIDSNDPRHVRFTAFCSGFDREILLFNGKFC KDKSFQHIVAMKSKGKLVVHLEFEGSLFCWTFNNGELGAVNSPDDSVLKQFHVRVLFS PK</aaseq>

Gene Sequence

<dnaseqindica>2102..2638#1206..1387#851..1087#709..768#280..448#gatttagggttccaggccgccgccctccgccagcagttccctgaccggcgccgcgacttctccgggccagtggaacgaagttgccgcatcggcgtcccctgcatcccaccgcatcgagaaggtaaatccatggatttggatgacggatctgtggttgcgcctcccatttttctttcaagatgagttgcgagctgtgtgccaaagaagcccatcatcgtctccatatcgcacagggacagggttgctgagagcagcagcgccaccagcccaaccgtggtgatggcttcgtcgccggagaagaaggatcctcctagttgtggctctcgggattcccagcccatcccttgcacggacgatccccccttgtctgaatccccaacgacggacctaggctgccacgatccgcgcgacgaggacgccgaccacccggcaccacccatgggcaaaggtgcatcctcaatcctcctcttgctttcatgtatgcatttccttatacgatatcgatcgtcattcgtcacccaaggcactaattcagactgcaaattcagacttttgtcccatcacacttttttgtttttcaattctaaaacaccacattggttgtgtgcctctccgtagaggccagagatgtaaaccatttctattatctgaaaaattcagattcagatgacgtctttgcctcagccaactcacacaatatgttgataggtgacatcgacgaggatagtgatgatgatggttacgcagacgaggagacaacttgcccaggtaacactactaataatccagtagagagcttcgattccagattaaaagacgaacagatactatcgctattttaatttctcagggcagaacttcacgaaggagcaggcaaaggaaataattcgcaagtggctagaaacatacgacaagaggaatagagaattcatggtggcgtgcgaggagttccaaaagcagggaggggatgagacgagtgcttcttgtccagtatttcctttgaaaccgctcccggagacaacagatttctgtaccaccaagagtttgtgctatcaccgtgaatacaagaccaatgatacttctgagagtaagtgcttgtcgattcctattataaaggattcaatagttattaatattgtgtgctaccaaattaccaaaatgtatttgtaaagtaacgacttttcttttcttttaaatgtttgtagctgcatctactattgggtggcttgaacccaaggagatgctccagatcttctctttgaggttgtccagctccatgtcctatcctattagtgtttacggaatctttgcagtacgtgattacttggaccctttgaggaattatgtcttcaaccgtaccagagatgatcctgtcatagttgaacaggtaaatacagtctatttttggaagttaagttatatatcttggctgaaaaagataccctaatatgcctatatatattatatatatgaatgctaataagatttttttttcttggataggctgaatgtagtgtgttagcagatacatattgttgacaattggttttatggttcttaaaggcatcttttgtatggtttatcgttagcactgtttcaaaatatatttttgtttctttcagtgctccattttgatataagtgcatcactgttcgctgcaactgtagtacattctcctgtcatcccttatattttggttacaatgggtctattgttaagtcttttggaagtattttggtgtaaagattttctagtgtgttaattaagaggtatatatatacctctaacactaagaggtctatatcagtagtgctcaatatctcattgttacgatatctcattatatatgatgtgcatttttgtatttcattttctgattgtactaacacgctgatggtgtccgcaaaaatatttaactgtgtatataccatcgagtttgtgcaaaatttgcatgccattctatttatttattagtatgcatgtccagttgagtttattctattagaatacttttaaaatatgtatttgtatgttctaattaacacacttaaaattgcttaagctctagctttggattctaacaagtccttttaaattgtaggattccttcacattacctctttgcagcccttgtcgaggaatgtatgtagtagaatatgcattgtttgaggttgatctttgggtgaaaatggaaggtggagtatctaatgacaagcaattagtatccgcgtatgtcgagatttttgcccgtggcgtgtttaataaggagataagggggcggatattaagcgaccattgctatctggacatacactatatgtatctttcacagagtattgaagctgtcatacaagtatccacagagattgacagtaacgatcctcgtcatgtgagattcactgcattttgtagtggctttgaccgtgagattttgctgttcaatgggaaattctgcaaggacaagtctttccagcacattgtggcaatgaagtccaagggaaaactggttgttcacttggagtttgagggatccctgttttgctggacttttaacaatggtgagcttggagctgttaattctcccgatgattcagtcctgaagcaatttcatgtcagggtgttgttttctccaaaataatgtgtaccagcctataatagcttctttgggtgaaggagaggaagtaaatcagtataaaaagcttgatacaatgtagtgcttgtgttaagatgcttatctgggtaataaactagaccagtacttgcattcagatttgcaaattgcatccagggccgagattgttggaggcactgttcacaaggaggcttaatctttgaaacctggatgggatgtccatccatcattgtgctctagcctctaatccaaacattgatggattgtacacaatttgtgctttatgggcttaattttacctccattctctcgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0590200, RefSeq:Os01g0590200