Os01g0590800

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0590800| Description = Conserved hypothetical protein| Version = NM_001049986.2 GI:297597108 GeneID:4326373| Length = 7026 bp| Definition ...")
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Gene Name

Os01g0590800

Description

Conserved hypothetical protein

Version

NM_001049986.2 GI:297597108 GeneID:4326373

Length

7026 bp

Definition

Oryza sativa Japonica Group Os01g0590800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24739195..24746220

Sequence Coding Region

24739195..24739332,24739480..24739638,24739999..24740121,24740574..24741011,24741975..24742156
,24742395..24742623,24742763..24742786,24744943..24745061,24745712..24745807
,24746025..24746220

Expression

GEO Profiles:Os01g0590800

Genome Context

<gbrowseImage1> name=NC_008394:24739195..24746220 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24739195..24746220 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcttgggaggatgaacctagcggtggatctcgggaaccctccgagcccagcggctgcacggatctgatcatgccgccgttgcggcctaaatccccgccggaattactagaccggctgcttctccacgacgaggaggaggaggagacgacaagctatgttgcctccgctcacccagcgcccatagaatatggttcagacgacgacgccggtttaaccaggtttgtcgatgacatgtatagctgcgtggaactggatgatgtggtagacaaggagacggtttgcccagccgtcctctttgtgttccccgttgatccatttcagactttcctatttaatgttggcctggaatcaattaaaaagatcaacaaccatattcatttcttgcattgcatgcaacgagttgaggtggggccagctgatgtggagcagggttttctgaaattcactccaaaggaaataagtcgcaagtggctagcaacatacatcaggaggaatgcagaacacacggaggcatataaagagtttgtagcgtcgggatatgattatgctcaacttctacgatatcctttgaggctgtttcccaagacatcatatcactgcatcaaaaaaagcatttactgtgatcatcacgaatacctgaccttcactacttctgagactgcatcaactattgggatgaatgagccaaatgatacgctccaaatcttctctttgaagttatccagtaacgaatcataccccattagtgtctatgggatctttgcggtacgcgatgaattggacaggctacggaattatgtctttaaccgcacaagagataatcctgtcttgattgagcaggcagaatcagaaggtggcggatcagatgacaagcaattgctttctgagtatgctgagatcgagaaccgtggcctaaaagatcctatgatatatggacggattccaagtgatcgttgcctgctagacgtagactgcatgttccttctcaacagtgttgaggctgtcatacaagtctttacaaaggatgacagtgataatcctcatcgcgtgagattcaccgccttcagcagcggctttgatcatgagatcgtgttgtacgatgacagattatgtaagaaggggaagttgttccagaatgttgtcgcggtgaagtctaaggaaaaactggttattcgcttagaattcgagggatcgacgtttcggtggacttttcaggatggcgctgttgcagctgttagttctcctgatgattcggtctcgaagctgtttgatgtggtggttcaaataattcaacaggaaacaaaagataaactatgttggaaattcacaaacaatggtatctgcagtacaaagagtgcttacaaggaggtttacaaaagagaaatttcaaatgctcatcagctttggaaagctagaaatgatcttaagtttcagggaaaaatcaaggagccaactcaagtttgcatggaagcaaaagcaatgattaaaacttatacaaacttcctttcaaatgatttgatgcaggaggatcttgatgaggaagatacaaacagaagaatggggggagctgctagcatttcaactggcaatggagattgccagattcttgaagttcactttctcacagatagtgccatcatcgcgcggacacttgcaagagaagaaactttcaagaagaaccagggcattggagcttaa</cdnaseq>

Protein Sequence

<aaseq>MASWEDEPSGGSREPSEPSGCTDLIMPPLRPKSPPELLDRLLLH DEEEEETTSYVASAHPAPIEYGSDDDAGLTRFVDDMYSCVELDDVVDKETVCPAVLFV FPVDPFQTFLFNVGLESIKKINNHIHFLHCMQRVEVGPADVEQGFLKFTPKEISRKWL ATYIRRNAEHTEAYKEFVASGYDYAQLLRYPLRLFPKTSYHCIKKSIYCDHHEYLTFT TSETASTIGMNEPNDTLQIFSLKLSSNESYPISVYGIFAVRDELDRLRNYVFNRTRDN PVLIEQAESEGGGSDDKQLLSEYAEIENRGLKDPMIYGRIPSDRCLLDVDCMFLLNSV EAVIQVFTKDDSDNPHRVRFTAFSSGFDHEIVLYDDRLCKKGKLFQNVVAVKSKEKLV IRLEFEGSTFRWTFQDGAVAAVSSPDDSVSKLFDVVVQIIQQETKDKLCWKFTNNGIC STKSAYKEVYKREISNAHQLWKARNDLKFQGKIKEPTQVCMEAKAMIKTYTNFLSNDL MQEDLDEEDTNRRMGGAASISTGNGDCQILEVHFLTDSAIIARTLAREETFKKNQGIG A</aaseq>

Gene Sequence

<dnaseqindica>6889..7026#6583..6741#6100..6222#5210..5647#4065..4246#3598..3826#3435..3458#1160..1278#414..509#1..196#atggcatcttgggaggatgaacctagcggtggatctcgggaaccctccgagcccagcggctgcacggatctgatcatgccgccgttgcggcctaaatccccgccggaattactagaccggctgcttctccacgacgaggaggaggaggagacgacaagctatgttgcctccgctcacccagcgcccatagaatatggtacgtacgtacgtacactttggcatctccatatacgtactagtatactctttccattctaaaatataaaaacttaggattgaatgaaatatttcctagtgcgatttatctggacacttattcaattttaggttcttatatttttaggacggatgaagtatatgtttctttctctgaattcttttgcaccacaacttgtgcatgtatgcatatgcaggttcagacgacgacgccggtttaaccaggtttgtcgatgacatgtatagctgcgtggaactggatgatgtggtagacaaggagacggtttgcccaggtaaaaatacaacatttactatgggaaagtctttttgtctcggaaattttaactattaattttgccactataagaaacagccactattcaaatgcgactttcaagattgtcctaaaaattttcccactcgatcaatcgtgagagaaatatcgttaatattttgccttttttttttgcctacgtacaatgttatctgatcgctaatcgatcctgatcgccaagggatcgaccaggatgagtaatcgtcgatcagcctcgattaattgacctgatcggtactatgtataccagaacctaaatagtataatggatggtataaagcaatcagtgcttataattgatggcagaatgatcacttacttgccctagtacgtataaagcaaccaacagttgtagcacacattcagatgtgctcaaccctaagacttgttctgaaagtgatcgataggtgctcgatctgatcgcacctgactgacgattaatcaaatgatcagatttctgatcaagctgatcgaatgaatgtccctaatcggagtcaggggactgatcaggatgattaatcgtatgatcagataacacttacttacatggcatgacacataggcatatcagcatggacaagtgacgtgaaatgtccattctacacttagccgtcctctttgtgttccccgttgatccatttcagactttcctatttaatgttggcctggaatcaattaaaaagatcaacaaccatattcatttcttgcattgcatgcaacgagttgaggtgaatccatcctcctcggtactaatttgggccatgaaatagatacaggtttatgaaatcaaggaaaagggagttaaaacagggagatgaagagtgtcaaagcgaagatgtttcatgtcgattacaacaaacatttatcaagaaacataacagaataaccatgaattttctctccttcttaaactttcccgaatctaacctaaataacaaaaaaaaaaaaagcagcgaagtaaccaaaattgggaaaaagtggcaaacagagagtggtggtttagaagagtggcaaatagttaaatatctcttttgtctaagatgtcttattgttttaatttttgaatgtcaaccaaaaagttttttcttaacaaaattaacaatatcgatcaatatgtgatatattgctacataagcttgcatgtttaaatttaatcaacacaagtaaaagaacaaagtaaactctagatagtacgttactatttacaatcatgtttattcttttttacaatttgtataggtcaaactgaaacttgtatgtttgttaagcgatatgtcacacattaatctatgttctatttttttatatatttttataactatttagatggtatattagaaaaaggggagggggggttgaacttaagagaaaaaaaccatctcccattacagttatgttaatccaaacaggagctacaaattcatacatgcaaatacatacggttgataccttttttaacttaattaactcttcaggtcagaagtacactagggaccaagaaaaggaaagagtgaatttcagaaaaccccatgttttgggggccaatgtaacacataactacatgttctatttattttctcacataacctagtgcattctatccaattaacacaataccacatgtttaagtgtgggaaagtgccacaatggcaagtgacctggcagacctgctccacatcagctggccccacctgccagatcaatgcgtgggctatttagggcggggaagcacccatcctctgttcccgcgcacgtgacgacgcacccctcatcttcctcgtgctcgctgcggcagtgttcctcctctttcaagttcagaggggcagctcgtcatgcacatgcaaaggcaagcatcgcctgttctgttttgcatcaactgatcaaactgtacacatacttcctatcttctaatacaaagcttgtgtgtgtttgattaaacatggccaggacctgacaatgtttctgctcgaattttttgtaagtaggtcgatcaccaaggtgcctgacactgtgttcctatgaaaaaaaatgaaaggaaaaaactgacaatttctatgcattaagcagaacaatggagcaagcgttataaaaacatcccatgtctgaataaaagcaccatagcaacagttaatatgtgacccattcaggtccagggcataggaaatttgcaaaacgaatccatatctgaaatatatacattgtgaagcagagaaaaatacaacctatttgccgagaaaaaaaaaagaggaagccatgtctgctcttttgtgaagcagaaaaaattgttgcaggcctttaaatgttaattgtggttagttttatatctgactgcaatataatagttgtaatacaatagtcttagacatggttcaatctacatgctttttttattttaaaaattatagtccaatgataaaaagcaattttgcaatgacaaacagaagaacgattgcatagttgtaatgccctaacaataatgggttcctctaaattacattttactagccctaattttttgacaagccaaacatgatcaaatggctggatttaattcctcgtcaaagaaccatgaagcagagtgtccttgcaaatcaccaaccagcatgctttggagtcaattcatatgatcatcacaagaaaagggatgaacgttacctgctaggaatggtacccaacaagttctcttcctctactcttcctccagctaggtcaacatcacgatcatcaccggaggccatcatgcaagagatggttggggaacgtcgccgccgcctgcgtgcgcaagaaagacgggaggcaccgcgtcgtgtgcgtgggaacaggaaacgcgcgcttctattctcccgcgtgatcctacctaataggccacgtattgacctggcaggtggggccagctgatgtggagcaggtttgccatgtcacttgcccttgtggcactttctctcacttaaacctgtgatattatgttaattggattgaatgcacggggttatgtgagaaaataaacaaaacctgtggttatgtgttacattagcctcaaaacatagggttttctgaaattcactccaaaggaaataagtcgcaagtggctagcaacatacatcaggaggaatgcagaacacacggaggcatataaagagtttgtagcgtcgggatatgattatgctcaacttctacgatatcctttgaggctgtttcccaagacatcatatcactgcatcaaaaaaagcatttactgtgatcatcacgaatacctgaccttcactacttctgagagtaagtgttggtcaattatattccaactgtttagaggattcattgataattatttgatcaatttatcttctttgctaccaatatgtacttccttcgttttacaatgtaagactttctagcgttgtccacatacatatagatgttagaaagtcttatattatgtaacggagagagtacactcttgcaacttttcttttcttatacgtgctattaatttcttgagagtacatatttgcagctgcatcaactattgggatgaatgagccaaatgatacgctccaaatcttctctttgaagttatccagtaacgaatcataccccattagtgtctatgggatctttgcggtacgcgatgaattggacaggctacggaattatgtctttaaccgcacaagagataatcctgtcttgattgagcaggtagggttctattttcaggaacttaattctatacttcggctaaaatagattctcaaaagtatgacataaataaacactaattagccttctttctcgcttggatatattgaacccaatatgctgtcaaatacttatcattttttatggttctaaatgaaaataaggttctatgtttgcagttgcatactagcattttaggatattagtttgttgctttcaatagtatttttttttgttcacgtatgtgagtgtatcacttgctttggctgtcactgtaatgttctgctctcattatttttattagatgaccatttccaatccttagtccatacaaggtattgtgaggtatagatattccattgttaattaattacctctggcactagagatacacctatacgtctcaatatcatccaaagtgctagataaaactattaattaattgttatatatgaggtccatttgtgtatccaattctgcgatctaagacaatgctaatgagattaaaaaaaatccaatattgtgtagaccgtaccatgaattcatgagtgtacgtgtcctatggaattcgttcgtcgttacactcagaaatatgtatttatacgtttcaattttattcaatgtatttcaaaatggctcaagctctctaattaaattcttacaagtttataaatagagatttgctccggtccaacaaaaagtacctcgaggtaccggtacctcatggtaccaaatcattttcgatcgttgaatctaataatgcccatccaatccagctagatccaacgatcggaaacgatttggtaccgtgaggtaccggtacctcgaggtactttttgctggatcgaagcaaatctcttataaatataactgcaggattccattaccttacctctttgtagcccttgccgaggaatgtatatactaagttttgcattgttcgaagtcgatctttgggtgaaggcagaatcagaaggtggcggatcagatgacaagcaattgctttctgagtatgctgagatcgagaaccgtggcctaaaagatcctatgatatatggacggattccaagtgatcgttgcctgctagacgtagactgcatgttccttctcaacagtgttgaggctgtcatacaagtctttacaaaggatgacagtgataatcctcatcgcgtgagattcaccgccttcagcagcggctttgatcatgagatcgtgttgtacgatgacagattatgtaagaaggggaagttgttccagaatgttgtcgcggtgaagtctaaggaaaaactggttattcgcttagaattcgagggatcgacgtttcggtggacttttcaggatggcgctgttgcagctgttagttctcctgatgattcggtctcgaagctgtttgatgtggtggttcttttttctccaaaatcatagttggtatctgcgccctaagttgtcctctttataggagaaagaacacattgatcaaatgaagaaaaagcatgctgcaacaaagcattcgcattaagattatgaaaatagcaaactagaaatgccattgcattatttgtttttactgatatggtattatcgtctaagtacaaccactttgactgctatattttgacttctttcaattgtggttgagatgtaccccttccccccaaaatacccaaaatataaaggattttggttagatgggagcctgtccagattcgtagtactagaatgtatcacatctgaccaaaatcctttatatttttggacagagggagtattaatcagcgacagacctacaatgttcaacgtatgcttggcaatatattatgggttctcattatttgacctacaaaattttgcaggttcaaataattcaacaggaaacaaaagataaactatgttggaaattcacaaacaatggtatctgcagtacaaagagtgcttacaaggaggtttacaaaagagaaatttcaaatgctcatcaggttcactctcaatccctttctatcttgaaataaatctagaagaacagatacatccctcccaaagttaaaacttttgcctggagactcatcatggaggcccttccttcttcccaaaggctaaatcagaggattcaagacattttagcagcctgctgcagatgtggtcaaatactcaaatagaaacagatttccaccttctcttttcttgtccttttagtaaattaacttggatgatctcagaagcaaaactctactgatatttttcctgctaatgttcctatggctcttattattgcttatatcattaacaatggctcttccaattccaccctaattcgaactctgaatatcatgtggtagctttggaaagctagaaatgatcttaagtttcagggaaaaatcaaggagccaactcaagtttgcatggaagcaaaagcaatgattaaaacttatacaaacttcctttcaaatgatttgatgcaggaggatcttgatgaggaagatacaaacagaagaatggtgaatttgcctaattgaattagatgctactcagatgctgcctggagtgataacgaaacaggaattggcattttctttcacataccttcctctcataatgccatttttattagagccacaaccataatggctcaatcacctttgaaggggggagctgctagcatttcaactggcaatggagattgccagattcttgaagttcactttctcacagatagtgccatcatcgcgcggacacttgcaagagaagaaactttcaagaagaaccagggcattggagcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0590800, RefSeq:Os01g0590800