Os01g0590900

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0590900| Description = Similar to Protein kinase AFC3 (EC 2.7.1.-)| Version = NM_001049987.1 GI:115438077 GeneID:4326374| Length = 4408 bp|...")
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Gene Name

Os01g0590900

Description

Similar to Protein kinase AFC3 (EC 2.7.1.-)

Version

NM_001049987.1 GI:115438077 GeneID:4326374

Length

4408 bp

Definition

Oryza sativa Japonica Group Os01g0590900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24747600..24752007

Sequence Coding Region

24747600..24747749,24747851..24747941,24748359..24748385,24748477..24748630,24748710..24748758
,24749092..24749206,24749327..24749418,24749514..24749661,24750091..24750155
,24750230..24750327,24750891..24750996,24751535..24751672

Expression

GEO Profiles:Os01g0590900

Genome Context

<gbrowseImage1> name=NC_008394:24747600..24752007 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24747600..24752007 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggtttctctctctctctctctctcctctctctctctctcctctctctccaatcgaatcggaatccatggagtcgtcgcggtcgcggaagcgggcccgccaggactgggacggcgccggcgcgccgccgccgccggcggagcgggcggtggtggcgaggggcggcgcgtcgccgccgtggagggacgacgaccgcgacgggcactacgtgttcgacctcggcgagaacttgaaccgacgatacaaaatcttgagcaaaatgggagaaggtacttttgggcgtgttttggaatgctgggaccgtgaaacacatgaatatgtcgcaataaaagttgttcgtagcatccgcaagtacagggatgctgcaatgattgagatcgatgtgctcaaccgccttgcagaaaatgagagatacagatcactctgtgtccagattcaaggatggtttgactatcgcaatcatatatgcattgtttttgagaagcttgggccaagcttgtatgattttctaaagagaaatagataccaacctttccctgtggaacttgtgcgggagtttggacggcaactgttggaatctgtagcatatatgcatgaattacgccttattcacactgatctgaagccagaaaacatactccttgtgtcttcggagtatataagggttccaggttccaagaagaattcacaagatgagatgcatttcaagtgcttaccaaagtccagtgccataaagctgatagattttggtagtaccgcctttgataatcaggaacatagctcgattgtttctacaaggcattacagagcacctgaaataatcttaggcttagggtggagtttcccttgtgacctttggagtgtcggatgcatcattgttgagctatgctcgggggaagcattgtttcaaacacatgagaaccttgagcacttagcaatgatggagagggttttgggtccactcccagaacacatgataaggaaagccagttcatcagctcagaaatattttagacgaggagcgcgtctaaattggcctgaaggtgctgtttcaagagagagtatcagagcagtcaaaaaactagatcggctaaaggacttagtggcgaggaaggctgatcattcaagggcggtgctggcagacttgttatatgggcttttaaaatttgagccatcagagcgtcttactgcccaagaagctctagaccatccatttttcagaaatacaacatga</cdnaseq>

Protein Sequence

<aaseq>GFLSLSLSPLSLSPLSPIESESMESSRSRKRARQDWDGAGAPPP PAERAVVARGGASPPWRDDDRDGHYVFDLGENLNRRYKILSKMGEGTFGRVLECWDRE THEYVAIKVVRSIRKYRDAAMIEIDVLNRLAENERYRSLCVQIQGWFDYRNHICIVFE KLGPSLYDFLKRNRYQPFPVELVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSE YIRVPGSKKNSQDEMHFKCLPKSSAIKLIDFGSTAFDNQEHSSIVSTRHYRAPEIILG LGWSFPCDLWSVGCIIVELCSGEALFQTHENLEHLAMMERVLGPLPEHMIRKASSSAQ KYFRRGARLNWPEGAVSRESIRAVKKLDRLKDLVARKADHSRAVLADLLYGLLKFEPS ERLTAQEALDHPFFRNTT</aaseq>

Gene Sequence

<dnaseqindica>1..150#252..342#760..786#878..1031#1111..1159#1493..1607#1728..1819#1915..2062#2492..2556#2631..2728#3292..3397#3936..4073#gggtttctctctctctctctctctcctctctctctctctcctctctctccaatcgaatcggaatccatggagtcgtcgcggtcgcggaagcgggcccgccaggactgggacggcgccggcgcgccgccgccgccggcggagcgggcggtggtacgtccgtccgttcatccctctgtctgctttgctcgatgggggtggtcgggttcctagggttcatgggggctcctgtgctgacgttgtggtgcttgcaggtggcgaggggcggcgcgtcgccgccgtggagggacgacgaccgcgacgggcactacgtgttcgacctcggcgagaacttgaaccgacgatgtgagcgccaccccgttcctgtctcttggttggctgaaaggagatttgtgtgttcttagatcctgcctgcttggaaactgcagtagttttgttcagttttatgtggtgctgtagaattctactgcgaaagttcattgcaataatcgcatgagtgatttggacattgattacctagtgtaatacagtataatattgtatctgtgttctaaaaccaagggaggtgaatgaaacaaggttcccgtttggattagcaactttctgttatgttaataaactatatatgcccttgttccttgcttttgttcccagcatttattgatgctaattttagttgaaattgcaataaccgtagggctttatagctatttaggttctgtgagattgttcgttgatattcttctcttcttggctatgcagacaaaatcttgagcaaaatgggagaaggttggattttctgcaatctgttccctagtacctggtgtctttgctattattgtaatgtaaagcaacaggaatcattttaaatttttaataggtacttttgggcgtgttttggaatgctgggaccgtgaaacacatgaatatgtcgcaataaaagttgttcgtagcatccgcaagtacagggatgctgcaatgattgagatcgatgtgctcaaccgccttgcagaaaatgagagatacagatcactgtgagtacctcaaaatatttgatcccaaaaatcttagtcttttctgtttctctcctgatcagtcttccttactggccagctgtgtccagattcaaggatggtttgactatcgcaatcatatatgcattgtaagtctcaatttcattcatttatgctagttctaaaaatctataccaaatgtcagttgttgatatgcgcatttacagttccaatattccatattccacttttccctgttagttcaaagttttgtttgttggcaatttactttgctggccctccgaatattcacctttttgctcgtaggcagtgaaacatgctgctatgtacgatatggtaatgtgcttgaataggatttccatgcttataaaacagttgtcgttctttgctcataaaggtttgccgatatggaaacaaatcaaagataatttttcttcaatggatatcgatggttttgtcaggtttttgagaagcttgggccaagcttgtatgattttctaaagagaaatagataccaacctttccctgtggaacttgtgcgggagtttggacggcaactgttggaatctgtagcatgtgtgtgattgtttgattctgcatatcaattcttaacaaattcggtagctgctgattcattcttctgttgctgaaaaggagcatgcttgaccatcttttcctttctttcttctaaaatagatatgcatgaattacgccttattcacactgatctgaagccagaaaacatactccttgtgtcttcggagtatataagggttccaggttccaaggtaatgtcaatcagttttgtagtgatcatctgctattctgaaactaggcatgcggtattagcagttatgttgaatgatcccttggggttgtacagaagaattcacaagatgagatgcatttcaagtgcttaccaaagtccagtgccataaagctgatagattttggtagtaccgcctttgataatcaggaacatagctcgattgtttctacaaggcattacagagcacctgaaataatcttaggtaaattggttatcttttaaggtttgcttttattttatcttgcttgagtttggaatatccttgtgatgaaggttaatgtggcctcgagtatgctccaatggagcacaacaaaggtgcaattcaaaatccttggatgcaataattgataatgctgttagaactcttatttttagtgattcgaaatgacagaactcattaaaacaatgaaaacttcttgccatcactataatcatgttagtattggcagaagaaatagcacttggtctacttattcgtcatttttttcagtgtactatctgattatgctttatagtaaagtggtaggcatttgactgagaagaatgtttttattaacttggtatttttagagatggagcatatattcctccctagataattctgatattcttgaatatgttcctatgacaggcttagggtggagtttcccttgtgacctttggagtgtcggatgcatcattgttgagctatgctcggtttgatatcttgtcatgcatatttttcctttcttttaccttagcctatgttcctaaccataaaaaacctttagggggaagcattgtttcaaacacatgagaaccttgagcacttagcaatgatggagagggttttgggtccactcccagaacacatgataaggaaagccaggtacattgtggcagtgtgcacactactttgatgatcattttcttttacctttttctgtgttgtcctcaatatagcaagtagtaaacgaatctatgttttactgtttaatttggcatttgacaaggaaaattttaattgtatcactttttaaaaatattttttgggttttcctttctatagaacttgacttgttagtggtatgctattctgccaagttgaacccctcaatatgtccgttttcttatactagcttgtaatttaacaacagtttgttcatgtgtagacccaaccttaaatccagggttttttttaacagtttatagttactccaactcactaatactcgagtcttatatttcttttgattgatttatccatagttctcatataaagtaataataatagatgcaactcatgcgaatgctgtttctgagtacgtcatgtggctgtcatgttaactttggctatggtatgctaccatttactgtcttgcaatgatcaatcttcttcattttatactgattttccatatttgcatcgtgtatgtcaactggaatatgcagttcatcagctcagaaatattttagacgaggagcgcgtctaaattggcctgaaggtgctgtttcaagagagagtatcagagcagtcaaaaaactagatcggctaaaggttttggttccctcaattatgtctctttttttttgctacgtttatccccaatctaaattatatctctaaaattcaaaacaatattatgcatattcctgttcttcagtctatctcctgtctgctacaagtaaaagaaataccatgcatagaaacatacaaatcaagagtagaagcagaagctgtttttttttaatgtaactatgcatctatagttaatgatttgtctgaatgaaggcatattatgtttgtaaatgtttgatataaagcttatttcagttttgtcagggtgcagatagaaaaaataaagttccattttctttggtgaactggtcctcttgtagtgtagtatctgtttcatttagtgatttactatgctgtttgtgtggtaaattcagagtattattctgctggttagtaaaattattccttcaaatttccactaagaggaaatgagaaagtattagaaacatattctgaaatatctgttctgaagaagattcaacttacacacctcaaacattatggactgaaacttcaggacttagtggcgaggaaggctgatcattcaagggcggtgctggcagacttgttatatgggcttttaaaatttgagccatcagagcgtcttactgcccaagaagctctagaccatccatttttcagaaatacaacatgagtacatgatcatgctgactctacccctcccaatatgtacgtgaagaacccaagcctggagaaagcaggcgcaaggacattcccatataaagcagaatgccttcagctcatctgtaccataaatcttctgtaagctgagctataatgcttgtggtggtgacacggcataactgttacgttcacccgatgtaatgtacaatagcattgaatctagggaaggttgatgtagcagatggaacttgtgcattgtgagttgtgtgatacatgaggaattgcattgcgactcatgtcgcagtgacacaacaatgaccaaagcaggccatatatgccccttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0590900, RefSeq:Os01g0590900