Os01g0591300

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Revision as of 04:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0591300| Description = Similar to Cytosolic aldehyde dehydrogenase RF2D| Version = NM_001049989.1 GI:115438085 GeneID:4326376| Length = 605...")
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Gene Name

Os01g0591300

Description

Similar to Cytosolic aldehyde dehydrogenase RF2D

Version

NM_001049989.1 GI:115438085 GeneID:4326376

Length

6058 bp

Definition

Oryza sativa Japonica Group Os01g0591300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24770493..24776550

Sequence Coding Region

24770655..24770775,24774098..24774240,24774361..24774744,24774865..24774954,24775045..24775218
,24775343..24775480,24775619..24775756,24775829..24775890,24776003..24776276

Expression

GEO Profiles:Os01g0591300

Genome Context

<gbrowseImage1> name=NC_008394:24770493..24776550 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24770493..24776550 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcaccggcgactgcggcaatggaaaggcggccgccggcggcggcgggttggtggtgccggagatcaagttcaccaagctcttcatcaacggcgagttcgtcgacgccgcctcgggcaagacattcaagacaagggacccacgaacaggcgatgtcctggcccacatcgcagaggcagacaaggctgatgtggacctcgccgtcaaggccgcgagagaggccttcgagcacggcaagtggccccgcatgtcaggctatgagaggagcagggtgatgaacaagctggccgacctggtggagcagcacgccgacgagctggcggcgctggacggcgccgacgccgggaagctgctgacgctgggcaagatcatcgacatgcccgccgcggcgcagatgatgcggtactacgccggcgcggccgacaagatccacggcgagtcccttcgggtggccggcaagtaccaggggtacaccctcagggagcccatcggcgtcgtcggcgtcatcatcccctggaacttccccaccatgatgttcttcctcaaggtcagccccgccctcgccgccggctgcaccatcgtcgtcaagcccgccgagcagacgcccctctccgctctgtactacgctcacctcgccaagctggctggagttccggatggagtgatcaacgtcgtcccgggattcgggccgacagccggtgcggcactctcctcccacatggacgtcgacagtgttgctttcactggctctgctgaaatcggccgtgccatcatggagtcggcggcgcggagcaacctgaagaatgtgtctcttgagctcggcggcaagtctccgatgatagtcttcgacgacgccgatgtcgacatggctgtcagtctgtcatcccttgcagttttcttcaacaagggagagatttgcgtggccgggtcacgcgtctatgtccaagaagggatctacgatgagtttgtgaagaaggccgtggaggctgccaagaactggaaagttggagacccttttgatgctgccaccaatatgggtcctcaggttgacaaggtccaatttgagagggttctcaagtacattgagatcggcaagaacgagggagcaaccctactcacaggtggcaaacccactggtgacaaaggatactacattgagcctaccatatttgtggatgtcaaggaggaaatgacgattgcgcaagaggagatcttcggcccggtgatgtccctcatgaagttcaagacggtggaggaggcgatagagaaggccaactgcaccaagtacgggctggctgccggcattgtgaccaagaacctcaacattgccaacatggtgtcgaggtcagtgcgggccggcacggtgtgggtgaactgctacttcgccttcgaccccgacgcgccgttcggcgggtacaagatgagcgggttcggccgggaccaagggatggtcgccatggacaagtacctgcaggtcaagaccgtcatcaccgccgtcccggactcgccctggtactga</cdnaseq>

Protein Sequence

<aaseq>MGSTGDCGNGKAAAGGGGLVVPEIKFTKLFINGEFVDAASGKTF KTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGKWPRMSGYERSRVMNKLADLVE QHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGAADKIHGESLRVAGKYQGYT LREPIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAEQTPLSALYYAHLAKLAG VPDGVINVVPGFGPTAGAALSSHMDVDSVAFTGSAEIGRAIMESAARSNLKNVSLELG GKSPMIVFDDADVDMAVSLSSLAVFFNKGEICVAGSRVYVQEGIYDEFVKKAVEAAKN WKVGDPFDAATNMGPQVDKVQFERVLKYIEIGKNEGATLLTGGKPTGDKGYYIEPTIF VDVKEEMTIAQEEIFGPVMSLMKFKTVEEAIEKANCTKYGLAAGIVTKNLNIANMVSR SVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGMVAMDKYLQVKTVITAVPDSPWY</aaseq>

Gene Sequence

<dnaseqindica>163..283#3606..3748#3869..4252#4373..4462#4553..4726#4851..4988#5127..5264#5337..5398#5511..5784#gtccaagagatctactgttctccttgttgagaggaagccatccagccagctagctataagatagatagaagaagatcaagacgacgaccaagtagaggataggcatctctcgaagcttagagacaaataattaactagagatcaagagcctattcgtcgtccatggggagcaccggcgactgcggcaatggaaaggcggccgccggcggcggcgggttggtggtgccggagatcaagttcaccaagctcttcatcaacggcgagttcgtcgacgccgcctcgggtaatacatagatatatgcctcatcgtcattgattaacttaattaattaattaattaattaattcccatggtttctttacaagataggcgtactgctacacgtttcatcgtctttgattataatttttcatccttatgtgtgtttctacccattctctttccagctatctgatacgagaaatttaatttaccatacccgaggtaccagtacttaggatatttaggaagtaccaaagtttatataaaaaatatgataccaatacaacttaattcagaactgtctctaatatttataggaaactatttaagctctcgacaattccgtaccattttttttttacattttctttggaaaatatgataaatttaaccggcctctacaaattaatagttatgaacaatcctgcaatatatatatatatatatatatatatatatatatatatagttatgaacaattttgtcacgtatattagtattttaccgtatacgcactgtcgttgtcgtcgtcagccaactgatcaaaatctctcccaaggaaaactaacggcttaacatcgagcatggaatgcaaacgatatgatggtactctgttgacgaactaatttattggagttaactcatgctcgatttcttgcataaaaattagagaaatatgtaggtacgtacgtgtatgaatataatgtacaaatatgtaggtacgtatgaatatgatgtactgcgtgttgctatagagctgaggcggtttttgttttgttttttttgttttgaaaatagccgctagctagctagctttctcttcaattctcgcggtctcctgaaaatgaaagaaagagtatgttccaacatggaaaactctcgacgaccgatctaatactgaaaattaaagaggaggttaaaacttaaaccttacgggggcaaagaatctaactgctctggatctagctagctgtactatattttcacaaatttctcctgttctatttaataaaattggtggctcatgattcgttaaacaaaaaaaaggaattcttgctgcctccatcaaaacattaaacgaccatccatgtccatgaacccttgtactaacggtacaccacacatttatatcatttatatcagttaccatatacgtaagtagccatgtctgctggtggttaatttattgcaataatataacctatagtgttttatatgttatttctttctctctttattctttttgcatcatatatatcattcatcagaagtagttaattaattaaattaaagcgtaattcctatagtttttttaattcggtgttatttattttctcttaattattatatattttcttttacatcattcatcacaagtatataaagcatgaatgaaacaaagttttgcgtcatgcatgagtcatgtactttggcattatgaaatgagcacatgatattgactcttagacgtggttgcatccgtagaaacaggaggccagatcgaagccaagtcaaaacggttgtgtacgttctatatgtctcgctcccagctatacagatatctacaaataataaagaatatatttttgtttatctccttagctaagctagcattagcagccggccagcacagcacacatgacaagctagctattccctccgattttaatatataacaactttttaggacacacatttgtttgactatttgtcagatttaaaattgtgtgtaaacataaaaaaaatacaagttattcttaaagtatatatataatgataaaataaataataaccttatgattttttaaaataagatgaatggttatgtttaaatgtcaattgtgccaaatcggagagggtattagctagctactacatgaagcaccatgaatcgtacgtcaagtggccaaacgtggcgtgcactgcgattgcaaattaaggcagttaaaaaaattttggtttctttgtagggggaatagctttatttatttacaagagaaaacaaattatccagcatttattatgccctcagaaaaatatccaccctaaaaatggaaaaagggaatcaatgtgagtgtggctccacgtagacatgacgtcatggtgagagggaacagctttgactagtcataaatatcttccattctcgtgggattctgttcataatcctcggcattccctcattgtgccactaacaaaatggaccttgctttcaaaaaaaaaaaaaagatggaccaagaaggtcctgtcggtacaaaactttgaaaaatctcaaattgttcttcctctatttggattggccattgcaaccgatcaaagttgaaaattttgatcagtgtcttgtactcttgtaccacttctgtcccataataattatatttctagaattcaaattatctcaaatggttttcgtaataaagtacaaattatctcatcaatcacttcccattcaaattcctccatattttactctcaagcaccctcccacttttacatatgcaccattgaatgagagacatcatagtttttcttctctgtatcatatataagtcatttcacttttttagttaaatttctttgagtttgaccgagtttatataaaaatatagtaacattttcaatgcaaaacaaacatattatcaaaatatattcaatgttagatttaatgaaactaatttggcattgtagatgttgctaatattttctataaacttggtcaaacctaaacaactttgactaagaaaagtgtcaaacgatttataatatgaagcagagagagtatatgataagataatttagaattacaattacttcgggacgaaggtaatatcaaaattagggtttacaagaatggaaataatgttcactctattaaagtgtttgactttttcaacttttctaaaaatatttgccacggtcttttcttttcctcttatgtttgtgtgaagtggatacttcactctcgtgataaatcaagtcatactttttcaactgaaaatagttatctctaccactttaaaagtgcagtcgtcctccttctgttctctgtccatcattccacctagggtccagcattttattctcgatccacctatcgagccaacccctaattatatgggcctagcctgtgctttattcttaatccacccactcagctaatctcaaaggtctggccctatattactactaaggaaaaaaatgatggtgcaaagagataaactaaaagacatcacccaaaggaccatggaaaaactcaaaatgttaatctctatctccttaaatcttgtttcaagaacgaaaacggacaaatgtaattgtttctatgtggatttgatttttacaggcaagacattcaagacaagggacccacgaacaggcgatgtcctggcccacatcgcagaggcagacaaggctgatgtggacctcgccgtcaaggccgcgagagaggccttcgagcacggcaagtggccccgcatgtcaggctatgtacgtgtttccactcccatatgatcttcttcagagccaaattttacaagttcgtccaatttactgtatggtactgtagcttgtccgacaaaatccacaaacaatgttgccgtcacgcaggagaggagcagggtgatgaacaagctggccgacctggtggagcagcacgccgacgagctggcggcgctggacggcgccgacgccgggaagctgctgacgctgggcaagatcatcgacatgcccgccgcggcgcagatgatgcggtactacgccggcgcggccgacaagatccacggcgagtcccttcgggtggccggcaagtaccaggggtacaccctcagggagcccatcggcgtcgtcggcgtcatcatcccctggaacttccccaccatgatgttcttcctcaaggtcagccccgccctcgccgccggctgcaccatcgtcgtcaagcccgccgagcagacgcccctctccgctctgtactacgctcacctcgccaagctggtaaccaatgttcaaaccaaatccacccttttgttttcatgcctgcttttcttcttgttcttgagttgattttctagaatttggatgataattcagtgtacctttgatatcatcattcaggctggagttccggatggagtgatcaacgtcgtcccgggattcgggccgacagccggtgcggcactctcctcccacatggacgtcgacagtgtgagcactccgatcaccatctggtactgtagcgtttcaggtttttgtctgaatgagtttctgaccgaaatgttgttgtgcatatgtcaggttgctttcactggctctgctgaaatcggccgtgccatcatggagtcggcggcgcggagcaacctgaagaatgtgtctcttgagctcggcggcaagtctccgatgatagtcttcgacgacgccgatgtcgacatggctgtcagtctgtcatcccttgcagttttcttcaacaaggtaactaaatgcactatgcaccggaccaaggttcagaaatgttcaggttaggagtgttcagttcagactctgaacttcagagcaaaaaaaaactgaccgtgctactggcgtctgaaattttcagggagagatttgcgtggccgggtcacgcgtctatgtccaagaagggatctacgatgagtttgtgaagaaggccgtggaggctgccaagaactggaaagttggagacccttttgatgctgccaccaatatgggtcctcaggtaatattatcctactattttcatatttttgttctgaaacattttctgtcgaaatgcgagcaatggaagaaaaaacattgagatgacaaaatggacaattgtatcagaacttatgaacattatgttttcatttgctaggttgacaaggtccaatttgagagggttctcaagtacattgagatcggcaagaacgagggagcaaccctactcacaggtggcaaacccactggtgacaaaggatactacattgagcctaccatatttgtggatgtcaaggtaaccagcttacatttagaagcacaatcaaatcaaatcaacaatgctcatctgggttgatcctccatgcaggaggaaatgacgattgcgcaagaggagatcttcggcccggtgatgtccctcatgaagttcaagtcagtactcaaaaacctcacaagtttcgatgatctgatctcatctccaaaacaaacaaaaaaaaacattctgaaaacttgacttatgatctgaacttttttttttcttcaggacggtggaggaggcgatagagaaggccaactgcaccaagtacgggctggctgccggcattgtgaccaagaacctcaacattgccaacatggtgtcgaggtcagtgcgggccggcacggtgtgggtgaactgctacttcgccttcgaccccgacgcgccgttcggcgggtacaagatgagcgggttcggccgggaccaagggatggtcgccatggacaagtacctgcaggtcaagaccgtcatcaccgccgtcccggactcgccctggtactgataaatcaaatcaagcagcagctatagctagagtgtaccatgtaccatgaatgctgcagcctgtgtagtgttttcggatgtttttctccttaattctgctgctgcttggtgtggttgtatgtagtttggttgtggggtgagatatggtgcagattaaaaggggttctgatgatcatgatctgatccttgtttggttgaacttgttgagaaatggatgtatagaactcatgtgccatcgtttgaaatcgtacaaaatgtgcctcaaagttcaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0591300, RefSeq:Os01g0591300