Os10g0493100

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0493100| Description = Pentatricopeptide repeat containing protein| Version = NM_001071471.1 GI:115482685 GeneID:4348985| Length = 4209 bp|...")
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Gene Name

Os10g0493100

Description

Pentatricopeptide repeat containing protein

Version

NM_001071471.1 GI:115482685 GeneID:4348985

Length

4209 bp

Definition

Oryza sativa Japonica Group Os10g0493100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19175347..19179555

Sequence Coding Region

19178393..19178914

Expression

GEO Profiles:Os10g0493100

Genome Context

<gbrowseImage1> name=NC_008403:19175347..19179555 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19175347..19179555 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgccgcgccgcttcccgcgcccttcgctcggagggctcgatccaagggcgagggggccgcgcggggggcggtggcggtggcgccgaggacgcacgccacgtgttcgacgaattgctccggcgtggaaggggcgcctcgatctacggcttgaaccgctccctcgccgacgtcgcgcgtggcagccccgcggccgccgtgtcccgctacaaccgcatggcccgagccggcgccgacgaggtaactcccgacttgtgcacctacggcattctcatcggttgctgctgccgcgcgggccgcttggacctcggtttcgcggccttgggcaatgtcattaagaagggatttagagtggaagccatcaccttcacacctctgctcaagggcctctgtgccgacaagaggacgagcgacgcaatggacatagtgctccgcagaatgaccgagctcggctgcatacctcctgagatgaaacaacaattaacctttcttcataagcatttttgccaacttctttaa</cdnaseq>

Protein Sequence

<aaseq>MARRAASRALRSEGSIQGRGGRAGGGGGGAEDARHVFDELLRRG RGASIYGLNRSLADVARGSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRL DLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPPEMKQ QLTFLHKHFCQLL</aaseq>

Gene Sequence

<dnaseqindica>642..1163#atccccgcacatctgcccttctgcacaccaagcctggcattggatggctgctcgccggcagcacctacagtcccagctgtggagattggtcgatacggcatacggtatcaagaaattgtgagttttcttaacttaattcagctgtatgtcctttatttacatgcccatgaataattttgacagacaaatcattaattgtttggcatataggttgaatcatagatcaaacttgggtactcgacgctcacaaagtgtgaatgaaatctggaaaccagtgattgagaatttgagataaaagtaatgcgagattcaccaagaaaacccacaacaaacatcactaattgaccatagtgtactcaacgagagaggggaactctggtcagggaaggccggaagactagggagaggagagaagggggagggggggaagttgggctagaggtagatggcgattgcttcaagattcgtgctcatacacgtgtcaactagaaaaagcacggtctttctgatgtttggaggacttcgtctcctacgcaattttcttcacactcacgccggcgcccctcatctccttccccaattccctctccggcgacaaggtcagggcggcgccgatcggcgagcttcgcactagggcgggcatggcgcgccgcgccgcttcccgcgcccttcgctcggagggctcgatccaagggcgagggggccgcgcggggggcggtggcggtggcgccgaggacgcacgccacgtgttcgacgaattgctccggcgtggaaggggcgcctcgatctacggcttgaaccgctccctcgccgacgtcgcgcgtggcagccccgcggccgccgtgtcccgctacaaccgcatggcccgagccggcgccgacgaggtaactcccgacttgtgcacctacggcattctcatcggttgctgctgccgcgcgggccgcttggacctcggtttcgcggccttgggcaatgtcattaagaagggatttagagtggaagccatcaccttcacacctctgctcaagggcctctgtgccgacaagaggacgagcgacgcaatggacatagtgctccgcagaatgaccgagctcggctgcatacctcctgagatgaaacaacaattaacctttcttcataagcatttttgccaacttctttaacctgaacgcaagcacctgtctgcaattaaaatattggatgcaggttcaaattgaatgaacaggttttataaaatttagaagcgcagaaatgcagcatgccacacaccacacaacttttattcaggaacaagattggattgtataaaatggtttcgatctgattatcttatctcaacgtattaatatgcacatatactaatcatgaaatatctgatggaatgatgtttctatttacctgtgtgaggcagcaaggagtgagatggataacaccacatacattattattctagaacaattttgtaaaatactgttgtgctcatgaagcgttccaaagatgtttcacaacctgtgctccacgggttttgagcttaatcctgggacattcagtctcatgaactgtcccattcttaaacatggaataaaggatgacagcatgatttctttgtctctataatcttttggctacccacagataatagctgtaaatctatactactttaaaaggagtagtggtggtggtgagtggtgaatctgccaccaccccacaccaccaactctcaaaattctgacatgtgggatcactgtctatcccttctccaaaccaattgtatgatagaacagtgaaaatagcgaggtatgtcagtgacccagagaggaggggacggcgcgtggtgagctacaaggcatactcagtggagggcaagatcaaggcctcccgtccgtagtggactccgctgcatcaaggccaactgctccgaactgatcaatttatggtacggatcacttctcctttcctttctttttcaccttaagcactctcttgattcttcgctgctacctcccttaatttctttcaagatattgtggcacttgatcatggctgagacctaccttccagtgtgaaatggattttgtcaaagaacttattccattagcttattttccgattacatggaagacattcttttctggaataaatacagaactaaatcctatttcctgaataaaagttatgtggtgtgtggcatgctgcatttctgcgcttctaaattttataaaacctgttcattcaatttgaacctgcatccaatattttaggtgcagacaggtgcttgcgttcaggttaaagaagttggcaaaaatgcttctgaagaaaggttaattgttgtttcatctcaggaggtaatatgcagatgattattccaattgtcattgccttgccatttttatcacgagtctttacaattttatatcttcctacatattctttccagattccagatgatccagtgtctccaacaattgaggcgcttattttgctccatagtaaagtaagtacacttgctgagaaccaccagttgacaacacggcttgttgtaccatcaaacaaagttggttgtattcttggggaaggtggaaaggtaattactgaaatgagaagatggactgggggctgaaatcccagtctactcaaaagcagataaacctaagtacctgtcttttgatgaggagcttgtgcaggtaatttatttggccatacctacaccagagatccatatattacttttataactgcagcttttacttgttaacatttcattgtgcttttacatttgttccaagctttcaggttgctgggcttccagctattgcaagaggagccctgacagagattgcttcgaggctttgaactaggacactcagagatggaagttcttccaataatccgacaccttttgccccttttgatggtcctcctgttgacatcttgcctaacagggaattcatgctatatggacgatctgccaatagtcccccatatggagggcctgctaatgatccaccatatggaagacctgccattgatccaccatatggaagaccaatatccacaatatggaagaccttccaatgatccaccatatagaagacctgccaatgatacatcatacggacggttgaacaatgatgggcctcgtgatccttacaccgtgtatcctgtagagtacttctctaaaagagagtaccgtagtggaagtagcaaagtcaccatctgcttcatacgacagatatgcagcaactactcgcttgcctagtagagaactgccctcatctattagtcctggtgccgattatatgtcccgccgttcttatcttgaccaagtacctactgataggtactctagtagggtacactacaattaggcctctcgagagctgggaatagtaatgtgcaacaattaggaatcaccagagctggaaattccaatgcttatgattatactgaggtacatttccaatgcgttagcttgcctcttctttgcaaatggccctcgcctgatatgtttccattagaaacatgaaaccatatatatgactgttgcattatgtctattttcttccatgatggttcagacgtctgaaaaaaggacaaaaatattctagaatatgtcatggtggtccaaatatatccttctgtcttgtgcccactctaatatctatcattggtaacactattcaattgttaccatgttgttgcaaaccctagattcagttattcagctgttctctgctactgttgcttaccagttttcttagttgggtgttgatcttttctcattttttatttccttgtttcctggtacacctgatgcctctctgatgcatctgaatgtatgtttttgttctcttcagtgcttaatagatttaaatttcattcttttcaggctgcggagcagatccatggacgtgaggattaccgaagactgtcaggtctcactgggtatggcttacgcagactgaatttttacaggacacaaacatgaattttgtcctcataatcattgagtgatgatctctttgcaggtatccaggtggctctgtcgaattgcggattccaaatagttatctggagtctgtgactgtctgtcattggtgttggtggtgtcaatctagctgagatccgtctggtatagcgtatgcgaaacatcatgcactatccccagtcttaaccatgccccaatggccaccaatagttttcctcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0493100, RefSeq:Os10g0493100