Os01g0593600

From RiceWiki
Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0593600| Description = Conserved hypothetical protein| Version = NM_001049997.1 GI:115438119 GeneID:4326384| Length = 4075 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0593600

Description

Conserved hypothetical protein

Version

NM_001049997.1 GI:115438119 GeneID:4326384

Length

4075 bp

Definition

Oryza sativa Japonica Group Os01g0593600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24896764..24900838

Sequence Coding Region

24896765..24897099,24898019..24898245,24900007..24900014

Expression

GEO Profiles:Os01g0593600

Genome Context

<gbrowseImage1> name=NC_008394:24896764..24900838 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24896764..24900838 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccgcgggaggggagggagatcccgccgcccccccaaccaccaccgccggccacctcggatctcggctgcgtgctgcggcggcggaggaggcggagaaggaaggaggagaagatgttctatggggcgatggtgtgggatccgtggctgatcgtgtcgcagatcgtgtgcctgcagtgcctctactacctcgccctgggcctcctcatggcgctcctcgtcggcacccgcgtcccgcgcctcaccctcctctacctcttcgacttcgccacgctcaccccgcgcaccaccaccggatggtgcgtcatcgccgccttcctcctcgccgccgccgccggtgctgctttcatgctttatgtgattgagagagctaagaagtgcctggactttgcagccaccctctacatcattcatctgtttatttgcattgtttatggtggatggccagcttcagttacatggtgggttgttaatattgctggtttggcgattatgtctcttcttggtgaatacctatgtataaggcgggaattaaaagaaattccaatatcacggcttcgtgcaagtgtttaa</cdnaseq>

Protein Sequence

<aaseq>PREGREIPPPPQPPPPATSDLGCVLRRRRRRRRKEEKMFYGAMV WDPWLIVSQIVCLQCLYYLALGLLMALLVGTRVPRLTLLYLFDFATLTPRTTTGWCVI AAFLLAAAAGAAFMLYVIERAKKCLDFAATLYIIHLFICIVYGGWPASVTWWVVNIAG LAIMSLLGEYLCIRRELKEIPISRLRASV</aaseq>

Gene Sequence

<dnaseqindica>2..336#1256..1482#3244..3251#gccgcgggaggggagggagatcccgccgcccccccaaccaccaccgccggccacctcggatctcggctgcgtgctgcggcggcggaggaggcggagaaggaaggaggagaagatgttctatggggcgatggtgtgggatccgtggctgatcgtgtcgcagatcgtgtgcctgcagtgcctctactacctcgccctgggcctcctcatggcgctcctcgtcggcacccgcgtcccgcgcctcaccctcctctacctcttcgacttcgccacgctcaccccgcgcaccaccaccggatggtgcgtcatcgccgccttcctcctcgccgccgccgccgggtaacgccgcccactcaccgctcctcccccccccctggtctcgtgctactagtacggaccgagatggattctttctcgaaaaggaatcggattcatgcgctcgctgctagttgactacaggttgtaagagtaatgccagcaattagcaagttgaaccgagtgtatgctcccagatctgtgcgcttaggagaggtagtatgtcaaatttggtgccgttaaatcgagaaaacttgctaggaattcccccatttttcctaggtatatctgcttggtacctgctgaaattttacacccaaatcttccatttaatatgagggccaacaaggtagtataatttttactagtcaacgtgtacaatatgagcacgagggtaaaatgtttctcggcatagtactatttgttatgaatgtgattgtatgtatgggagctagcatatgaataggtgctcagttgatattaaagtagcatattcttcacattttcataaattggctaaatctttctagtttatttcagtttgatttggtactctcttcagtttcattctccaaatcaccctaggacagcttataacagagaacgggaactatacctccactttctaattctaccagcattcattacagatcgcagaatttactacccacatattacgcactattacacatttggtgattactgcaatctaagaggccctgtggaaaacaactcccttttgcctaatttcttcatgcattttaacaggttatcaacaaccaacttaaattaatcttgcaaactatatctatcatggataattgcagaaatcaaaaatatacttttaattatcaaggataagcctgttcttgacctttggtgtaactttgttttcatcaaaatatggttgaatgctaaccttttcatgctttcgcttttgcagtgctgctttcatgctttatgtgattgagagagctaagaagtgcctggactttgcagccaccctctacatcattcatctgtttatttgcattgtttatggtggatggccagcttcagttacatggtgggttgttaatattgctggtttggcgattatgtctcttcttggtgaatacctatgtataaggcgggaattaaaagaaattccaatatcacggcttcgtgcaagtaagcaattatctcctactggatctggcttggattcatgcttttcctctatataattattgtcttcatatatgtataaaaggtcctgtatgatttatttgcttaccctttagccttttgtactgaagtctgcatattgcttacacaatagtcatgtactagctagaatattagattaattcgccaatgaactaaggagcagtagcatgatagtatggtacaataattcttcccaatgattttaattttctattacttattttttctgcttgccacctatctgtgtcatcgtccctgtaactaagaccttgttccatcacaaatgcccacattttggaaaaaaaatatattcaggtgtatttatgctgttgactgattgggactataggaaagggagagtacaaaagttcaactagtgatgtaaagagtgtgggtggcaatgcttttctatttagctttccttggtacgtcacagacagattatttgtagggtgtacctcaactcatatgttccatgtagctaaatgttgtaaacccaatgccaaagaaaagaagatgaagaaactaacattattatgcaagtgcaagcatctcacaaactcacagttgtgtagttgcaaaaaattagtcacttctcacctgatatagaccataaagtatgtaagctcagcgtggagcagagatattcgtcagggacttaatattcttttcaatatggaagaatgctttctgaaaatctgtaccaagcttttgttcagtcactgtttgtggtcatcttgctagtccagttatggtgtttaaagtttttaatatgtgaaatcaagtatagcagggttaaggtgcttaattattagactgcttcttttctcttccatcatattgtgcctgttgtcttttttataaagcacagtgacaagtttagctagcatcatatgggattcccttggaatttctgaagtttgaagttcccatcatgtcgtgctgatcttagttacagcgttcacagttgtccttttctaacatttcttagtaaggtgcatattgcctttctgacatggattagtctcatgtcaataaggctcaatagtgtttggttaatgaaaagcctaatatattattctaacttgggcagttgggctaggccctccatgcacagataacttctgaaattgtttccggtgaggagcggactcagattaggcctgcaattagtattacattgattaactggccccaaatattctacttggattttggtttaaaaggcttctgggtcaagaaccattgggcacaattacagggatgcactgctgactcctggcttgggattttatgaacttgaaattgtgaaatagtatgggaacatgtgcccttagaagcgtacaaaataaactttgatagtttacctggtcaagtgcttaattgcttttatgccgatttcagagtggcttcaaaatcctcagtaaaaagttttagcgtgttgtttgttactgtatgttacaaacactatctataaataagatgccttcaccttttagatgccgggccaataataactaaatcaaactgttgtagtgaaattatgtactttcagttgatgtggttggttgtttcttttttttccttttgtggtatttgggattggctgtactacatgaacattgctacttttctccttccaagtcaccttctattggggataatcttctccagtcactttcaacttattagcctgcttaattattttgtcctgtctttcaggtgtttaatcttacagactaaaggagtatagatggccttcaaatgttgttaccccccaagagatgcttgttaatatgtttctttaggaatacaaagactcgtgatacatgctttcctctatggtttacgaccaatactcttcaaacctgcaaattgatgcatgatctcccagtaaagccaccaggtagagactgacagaacaaatcaagggttctgagaccaagcatagaatgccaactcaatttttaaagcatgtatcaactattcaagtcttctcttctctatggatagtctcattgaattgacgaaaaaagagattacttgacaatttgtatggctagataccagcaccttgaaacctgtgttctttagcgagggtctgtatcgcaccattcgattcttctttagctttatcctgcagataatatatccagtttccagtgcttcctcttaagctcattccagcagagttcagtttggcggccaatcacatgactactcgaacctccaaatcatgctgtccttctgaacatgtatgtcaatatatgtgccctgtgtgtattgcgtcagaggtgttgacatgagttggttaaaaatacatgcttgatacgaaattgtaatttccatcgcaggtgaactcgggcaaaaattttaaaatcccttgtgggttcgcactttttttttcctctagtgctgtgatacttgcagtagtttgttttatccttgctaagtattgtgatattgtcagtactacagaagcgcctgtaatctcaggtgtcaaaacccaaaatcacttctttctcttctcttcactaaggttaaatatgcattg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0593600, RefSeq:Os01g0593600