Os01g0594300

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0594300| Description = Pistil-specific extensin-like protein family protein| Version = NM_001049998.1 GI:115438123 GeneID:4326385| Length =...")
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Gene Name

Os01g0594300

Description

Pistil-specific extensin-like protein family protein

Version

NM_001049998.1 GI:115438123 GeneID:4326385

Length

2096 bp

Definition

Oryza sativa Japonica Group Os01g0594300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24942087..24944182

Sequence Coding Region

24942143..24943332,24943390..24943855

Expression

GEO Profiles:Os01g0594300

Genome Context

<gbrowseImage1> name=NC_008394:24942087..24944182 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24942087..24944182 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacgacgacgacgacgacgaaccacagcgccaagagcatcctcctcctcgcgctcctcctcgtgccgcacctcgccgcggcgtcgtcgggagatgcgctgatcagccagcgccgccgcctgctcgactaccacggcggcggcggcggccatggcggcggcgacgtgtacgtggacccgtcgtacacgttcccgaacgcgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagcgcgccgtcctgtcggacccgcacaacgtgacggggacgtggatcgggcccgacgtgtgcgcctacgagggcgtgttctgcgcggcggcgcgggacgacccgcacctcgtcgtcgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaaccgcctcgtcggcgcgttcccggacgtcgtgctccggctgcccagcctccggtacctcgacctccgcttcaacgacttcgagggccccgtcccggccgagctgttcgaccgcccgctcgacgccatcttcctcaactccaaccgcctccgcttccggatccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgccaacaacgacttcggcggctgcctcccggcgtccgtcgccaacatgtccggcacgctcgacgagatcatcctcatgaacaccgggctcaagtcctgcatcccgccggagctcggcatgctcaccggcctcgccgtgctcgacgtcagccacaacagcctcatgggcgccatccccggcgagctcgccaggctcgagaacatcgagcagctcgacctcgggcacaaccgcctcaccggcgacgtgccggagggcatctgccacctgccgcacctccagaacttcacctactcctacaacttcatcaccggcgagccgccggtgtgcatgcacgtcaaggcgttcgacgatcgccggaactgcatccccggccgccccgaccagaggccggcggagcagtgccaattccaaaacacccaccacgtcaactgcgacgcattcaggtgcaagaagttcgtcctaccctctcctccaccaccttcacctcctcctccatctccaccaccaccatctccatcgcctcctccaccttctcccccgccgccgtctcctccaccaccatcgccatcgccgcctccaccatctccaccgcctccatctcctcctccgccatcgccagtgtactacagctcgccgccgccgccgtactacgaggtttcaccggaggacaggtacctctcgccgccgccacctccggcgtaccacgaggcgccgccaccgccgtactacgaggtgtcgccggaggacaggtacctgtcgccgccgccacctccagcctaccaagaaacgccgccgccgccgccgcagtacgaggtgtcaccggaggacaggtacctgtcgccgccacctccatcaccggtgaagtggaagctgccggtgtacgagtactcatcgccgccgccgccggcagcaacatggaagccataa</cdnaseq>

Protein Sequence

<aaseq>MTTTTTTTNHSAKSILLLALLLVPHLAAASSGDALISQRRRLLD YHGGGGGHGGGDVYVDPSYTFPNARLRDAYVAMQAWKRAVLSDPHNVTGTWIGPDVCA YEGVFCAAARDDPHLVVVASVDLNHADMAGHLPDELGLLADLAVLHANSNRFCGAVPS TLERLHLLHELDLSNNRLVGAFPDVVLRLPSLRYLDLRFNDFEGPVPAELFDRPLDAI FLNSNRLRFRIPDNVGNSPASVLVLANNDFGGCLPASVANMSGTLDEIILMNTGLKSC IPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEGICHLPH LQNFTYSYNFITGEPPVCMHVKAFDDRRNCIPGRPDQRPAEQCQFQNTHHVNCDAFRC KKFVLPSPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPV YYSSPPPPYYEVSPEDRYLSPPPPPAYHEAPPPPYYEVSPEDRYLSPPPPPAYQETPP PPPQYEVSPEDRYLSPPPPSPVKWKLPVYEYSSPPPPAATWKP</aaseq>

Gene Sequence

<dnaseqindica>57..1246#1304..1769#aaacctctcctcctcgtcacacaccccgtctcgccgccggcgatgcgcagacgccaatgacgacgacgacgacgacgacgaaccacagcgccaagagcatcctcctcctcgcgctcctcctcgtgccgcacctcgccgcggcgtcgtcgggagatgcgctgatcagccagcgccgccgcctgctcgactaccacggcggcggcggcggccatggcggcggcgacgtgtacgtggacccgtcgtacacgttcccgaacgcgcggctccgcgacgcgtacgtggcgatgcaggcgtggaagcgcgccgtcctgtcggacccgcacaacgtgacggggacgtggatcgggcccgacgtgtgcgcctacgagggcgtgttctgcgcggcggcgcgggacgacccgcacctcgtcgtcgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaaccgcctcgtcggcgcgttcccggacgtcgtgctccggctgcccagcctccggtacctcgacctccgcttcaacgacttcgagggccccgtcccggccgagctgttcgaccgcccgctcgacgccatcttcctcaactccaaccgcctccgcttccggatccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgccaacaacgacttcggcggctgcctcccggcgtccgtcgccaacatgtccggcacgctcgacgagatcatcctcatgaacaccgggctcaagtcctgcatcccgccggagctcggcatgctcaccggcctcgccgtgctcgacgtcagccacaacagcctcatgggcgccatccccggcgagctcgccaggctcgagaacatcgagcagctcgacctcgggcacaaccgcctcaccggcgacgtgccggagggcatctgccacctgccgcacctccagaacttcacctactcctacaacttcatcaccggcgagccgccggtgtgcatgcacgtcaaggcgttcgacgatcgccggaactgcatccccggccgccccgaccagaggccggcggagcagtgccaattccaaaacacccaccacgtcaactgcgacgcattcaggtgcaagaagttcgtcctcccgtcgcctccgccaccgccaccatcgccgccgccgccgtctcctccaccgccgtcaccctctcctccaccaccttcacctcctcctccatctccaccaccaccatctccatcgcctcctccaccttctcccccgccgccgtctcctccaccaccatcgccatcgccgcctccaccatctccaccgcctccatctcctcctccgccatcgccagtgtactacagctcgccgccgccgccgtactacgaggtttcaccggaggacaggtacctctcgccgccgccacctccggcgtaccacgaggcgccgccaccgccgtactacgaggtgtcgccggaggacaggtacctgtcgccgccgccacctccagcctaccaagaaacgccgccgccgccgccgcagtacgaggtgtcaccggaggacaggtacctgtcgccgccacctccatcaccggtgaagtggaagctgccggtgtacgagtactcatcgccgccgccgccggcagcaacatggaagccataaaattaaaatcgattctttcgggattttttttttcacacactatgatcatacatattgttaaatttgttgtatgttgagtaaaaaaagggatgctaaatcttttctgttactacccctccttcctgattttcttttgcttgtactgtatgtatttttcttcttttatttttttctccttctttgaatgaacagcaggaaatctgcttttcctcccattgatttgcttgatttacagataatccattgtgaacaaatggccatattctgatatacatagacagaaatgaagaagaaaagaatgagagattttatattctcatttgcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0594300, RefSeq:Os01g0594300