Os01g0595100

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0595100| Description = Conserved hypothetical protein| Version = NM_001050002.2 GI:297597125 GeneID:4326389| Length = 6681 bp| Definition ...")
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Gene Name

Os01g0595100

Description

Conserved hypothetical protein

Version

NM_001050002.2 GI:297597125 GeneID:4326389

Length

6681 bp

Definition

Oryza sativa Japonica Group Os01g0595100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24973062..24979742

Sequence Coding Region

24973154..24973722,24975384..24975507

Expression

GEO Profiles:Os01g0595100

Genome Context

<gbrowseImage1> name=NC_008394:24973062..24979742 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24973062..24979742 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacccgacgacgccggcggacgcgcagccggagcaggcccacgccgccgagaagccccccgcggcgccgctgacgcccgaggaggcggaggcggaggcggagacggcggggtccggggatgacgaggagtacgtgagcgaccccgacgacgcgctgctcccggagatgcggcgccgggaggccagcgacgacgaggggtccgaggaggggagggcgcggatcgggtccgaccgcggcgacggcgacgacggcgacgggcagggcgcagccgaggtgtacgaggacgaggcctacgaggacgatgacgaggagtactacgatgatttggcggaggaggaggtcggcgagggcttcgaggaggagtacgacggccgcgcggagccgcccaaggaggtcgccggtgcccagggggaggatggggagaagggcgacgtggagggagaggcggcggtggaaggggatggagaagagaagaaggagcaggagccgtttgcggtacccacgtccggcgccttctacatgcacgatgaccgcttccaagaggagagtcgtggccgccgcagcaggagaatgtttggtgggaggaagttatgggacgctaaagatgatcaagcgtgggtgcatgacagatttgaggaaatgaatttgcatgaggagcactatgaggtatctgtccaattcctttaa</cdnaseq>

Protein Sequence

<aaseq>MADPTTPADAQPEQAHAAEKPPAAPLTPEEAEAEAETAGSGDDE EYVSDPDDALLPEMRRREASDDEGSEEGRARIGSDRGDGDDGDGQGAAEVYEDEAYED DDEEYYDDLAEEEVGEGFEEEYDGRAEPPKEVAGAQGEDGEKGDVEGEAAVEGDGEEK KEQEPFAVPTSGAFYMHDDRFQEESRGRRSRRMFGGRKLWDAKDDQAWVHDRFEEMNL HEEHYEVSVQFL</aaseq>

Gene Sequence

<dnaseqindica>93..661#2323..2446#gagagagggaagaaaaaggagaaaaaaaaaagaaaaaatctcaccacaccgccgcagccaaatctagggttgcttcgctcgcccgcccgcccatggccgacccgacgacgccggcggacgcgcagccggagcaggcccacgccgccgagaagccccccgcggcgccgctgacgcccgaggaggcggaggcggaggcggagacggcggggtccggggatgacgaggagtacgtgagcgaccccgacgacgcgctgctcccggagatgcggcgccgggaggccagcgacgacgaggggtccgaggaggggagggcgcggatcgggtccgaccgcggcgacggcgacgacggcgacgggcagggcgcagccgaggtgtacgaggacgaggcctacgaggacgatgacgaggagtactacgatgatttggcggaggaggaggtcggcgagggcttcgaggaggagtacgacggccgcgcggagccgcccaaggaggtcgccggtgcccagggggaggatggggagaagggcgacgtggagggagaggcggcggtggaaggggatggagaagagaagaaggagcaggagccgtttgcggtacccacgtccggcgccttctacatgcacgatgaccgcttccaagaggagagtcgtggccgccgcaggtgagttcttcctgaaaaacttatgccttatctgctgtacccatagttttggtagaattgctattgctcaaccgtaggctgtggctgtggcctcgaggaagccagagctgcattatacttcagcaaagtaaaacgggcataatcaaaacgtagtgaatctgtgaattgaggcatcgatgccaaaggtaggcgaggaagcgcagggggatttatcacatgcaattcaggcaaaagcctttcacaagaaaaaactgaactttaagcttagtataaattttaaactttgaaaatgaactatgtagaaaatgaaggatataacttaccagagcatctgaactcatttattttgaatatgtttgggtcgtcgtgctcgaaactaaaatcaacatagtgatcaagctgtaaactgataaaatatcaggaaacgtgaaaagtttgaatgaggttataatgacaaatgataatccacagtaagggtccagtgaaaccactttttcagggagtcctacatgaaatatgttcctacaatgaaatccagggactcgtgctagatacttgtttgttgggagctaatgcagacacattttcccaaccttggttcttgctattacttgtttttgacagtaactcagatttgtgtgtgcttaaattttgatgcttaagatgctgtcctggaggttagctacatagaattttgtttgttccttcaatgctagggttttagtaggacaagagccaatgtttattaagcatgtactctaatgcataagtttagctaacaccggagaagaaaagaggaggggttgggggattagattgggctgattgtgaattgaataaattcattttttgccatgagatggccgttatgaatactccttagaaatgcaatatgtaggacatattttaatataatgagaaggctaatcactgcatatttagtagaacctaaatgcctaatgatcgtttttgggcatagaatgttggaatttagctataagaagagtaaattgtactcatggtgcatggactgcaaataggtgcaataacctacaaaacactcatttcggtgcaacaacttgcttagttgatgcggactcgggtcaaacaggccatagaagcaaaatgattccacatggtgctcaccggtgacatgtcactgtcagcttgcaacacacctgttgcaacccatgatggcaggctagtaatttctattttgcagaaaaccccataacctgtaaatatccacgggcattcattagagggtttgtcaccccctctatttgattccatgatgatgaaaaactgtgccacattgttgggaccaacatgggaagagtgagctgcgagcttaccttttgtttgtatgctaacgattttcaatgtgcaatcagcaatagagcatgttcatcattcttcttccaccatatgttttagcttcctgggtcaattatattttgcatctcctctgcaaatggatgctctggttggcaagcgtctgctaaatatatagtagctacagctaatctattgagcatcggctcatgttggttatcgttatattttgaccctgctgcagtctgtcattggatagtagtggctgctaaatgagatcttgctcttcaactgtgctgattttgttttttactttcttctgaaagcaggagaatgtttggtgggaggaagttatgggacgctaaagatgatcaagcgtgggtgcatgacagatttgaggaaatgaatttgcatgaggagcactatgaggtatctgtccaattcctttaatgtgcaaatgatagctttttcttcaatgttagtattgaggtaggatttctgcattgcaggataagcgaatgtcaaggggtcgctttagaggccgtggtggtgggggtagaactcggggcactggtcatgggtttgccagaggtggaaagtatcgcggttataatgaagatatcaacaacaaccaccaaaaccgaccccaaaaggttgttagagggagaggacctcgacgttatgaagctgttgcaaagaacaaccgagatgttgttggattccagcggaaacagtaagtgattattattttgaatccttcccaactacccaacaaaaacacaatactgcacacaccactggggacacttgactgtaaataggtttcatggctgcacagctttgcttgtgattttcgccttacataattatcttattattacttgttcagacctgcaagatcacgagagtctgctgcaagtgcttcagccgtcagagagagtggccaaactttaaatgcgcagtcagaaatggcccctcctaaaaagaatgttgtgaattcaagcttaaattcagcgtcaccaccattttatccctctggtgcctccaacccagatttctctgtgccagctcaaagaagggacaatatgcaagcagggggttccaataaagtctttccatcttctatgaagatggatgacaatgcaaaggtacaatctggcccagcagttagaagggattatggtgcacgtgacaggtttcaacatgctgatggtcctgttagacaatctccaaggagtggaggaacatcgttgaattcatcaggatttgcagcatcgacagttaatcatggtcaatcttctgttgttagaactcaaggaggaaatgggattccttcaaacaatcagtccacttcgtctcttcaccaaaatcctagggctcctacacaccagcaaagtcacacatcagtcgtgcaccagaagtcagggcaagtgcaaactcaatctgcaatgagaataccaactcagcagttgaaccatcgcactggcaacccgtcaaccactcagcatctacctgttagatcaactgaaagtgttgagaatggtctgtatcctagttcgaacaaatcaaatgcatcatctggggcaggaaaaaccaacagtcaggaagcaggaaggggttcctttatgtatggtggagcccaggttattggggctgctggggctattggtcttgcccagggcgaacaaaattttcctggcactccagctctccttccaggtttgcttccttagtaattcaacagatcttttcttgtaataatcggattgctttgactttctaatttccaatgccatcacttgaactcattgtctttcctgttttcatcgttaatgcagtcatgcaatttggcagtcagcatcctggtggtgttggagttcctactgttggtatggccctccctggctatgtggctcaacagcagatgggaatgggaaataacgaaatgacatggtatatttcattgtctcactagatttgcttttcacaataatattttctgtggtgtaacaactggatgtaatcttaactgcaaggggtgaatataagacaatattacaccaaacagtattttcacttgttcttagaatagcacgtcttgttttgatttctagctatactttgtctagcttttgtttaattaaactatgatagcaggaattgatagttgttacaaatgcttttgttttatctttcaatataatatgttatgggattttatagctgaaacttgctttcccaagtaatattcgctcataaactcttttggggcgtcatttttgttttgttgaagatgtaataatacctttctcctatttatttagttctgatttattttcctatggattccaatatgatgcttttgttctttgtctttataaactatatactgactgttgggccttatttgcatgattttttatattattctgtcttataacacatgaaatgttggtttggtaggttgccactgttaactggtgcagctggtgcttttggaggatcatatccaccttatattgctctggatccagccttttactccagatcttcaggacagacctcatcgtcagttccttccaggtaaaggatataatcgacaaatagcttatatacatgggttaagctgctctggttctgtgggaaaagcgcctcttggtgtaaactaaagtgctgaacatctgctttagacttagccgtctgaccatgtatgcatcttcaaaaacattatcacttgttttgactagtattattagctgcaaatgcagttgtgatagcccccagcttgatatatgtacatttttgtatttcaattcaaagtactcaactacgtactggttcagaatgtgtatgtatattgatgaactgatgaagtggatcactcgaatggctaaaagaagtattactgttggatacacatttgattcagaaatgttaatataagaatgggaatatactttggaggaatttgggcgcgatacatataaaggcattagtattatgtaacctacctggatctgtgttcttgtatcatccatgaattttcctttgaaagtgggaattaaaaatatttattcattcttacagggaatctattgctaacaagggggcttcccctcctcgaaatggtacatcatactacctttattgatgttgactcttatattatattacaatttgtaagttgcttccataaatatttggttgacattttgcattgcagatattgtcaatgaagaggttgatcagcgtcagaacaagcctaggaggcaagtattctctaataacattttgaatctcacctggtgtatactgttttcatgccatgattttcagctcatgtatttactccttaatgcagatactcagagatgaacttcagtcagtgaagcaccatgtaaggtgaatagcatctgaataagctgcttatggtcagttatttatatatttgtttgatatacctacaattttccttatgtcctgcaaacttatctgtggtgtatgcttatgcaggctatatttttaagcccttagtgatctcctgttttgatctggagcactttgggtggcttcttgtcctaagttatgttaggtactgccctattttgacattttcaattcccttactaatttgcacacaatatattttagcaaatggtatgcatttgctgctcattttactcctaacattaaatttaagagtaaattgcattggtggtacacaaacttttctggtgggtgcaatctagtgtatgaacttgtaaatttaacatcactacatgccctatttcatgaacgtcattgtcttttttacaatccttctgtttataccttagcgatatgtttggattgattccaaagcatatttgtaagggacaatgattgtgaatgttacactagttttcttgatttagatgccattttaggtcatataacaaaaaagcatgctgctcctattaactccatatcattatccctttctttaacacttctacatgagcaaccgttacagggtattttgcctcaagaaatgacaatagcatgtattttcacaacccagacactttttcttggatctaaattatactagagtagtactatactctctaaccattctagtgcaccttttttcttaacttcattgataggtatctctccttttttagacaaactggtaaaagctgtctgctttaacttgatttatactgttctgaaggttataaacgcctgtttgtgctggtgtcacttcacagcagactcaggggtggcctttgttgcttgaattgtggtaagccttttgtaagagcaatgatttagagaacgcattcagtttttgatgataatataggtgactgactctatcatgaacatttaggttttgctcggttgtgatgcgttgagaaatgtcaaattcgttggttgcgtctgaagatgtgggcggttcttgaagagagcttggaataatgatctgcgttggttgataaaagtttgggttttttagtacatctttttagcgactgtactttgtgtcgatctgatatacctatcctcttatagtggtatttgttagcacaagtggctttatagctgcagtttgtatctcttgaacaatgtgtaaacctgggtgcgatttgtgacaagtttacagcttgaatgagtcagtccggttccatcttggtagcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0595100, RefSeq:Os01g0595100