Os01g0595300

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0595300| Description = Malate synthase-like family protein| Version = NM_001050003.1 GI:115438143 GeneID:4326390| Length = 1716 bp| Defini...")
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Gene Name

Os01g0595300

Description

Malate synthase-like family protein

Version

NM_001050003.1 GI:115438143 GeneID:4326390

Length

1716 bp

Definition

Oryza sativa Japonica Group Os01g0595300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24986648..24988363

Sequence Coding Region

24986650..24988332

Expression

GEO Profiles:Os01g0595300

Genome Context

<gbrowseImage1> name=NC_008394:24986648..24988363 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24986648..24988363 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agggccgtcaaggacatggccattgctatgcatttcgagctccgtgtcgtgaaatctgaccggagccggttcatcgccaagtgcgcgagggaaggctgcccgtggcgtgtgcatgtggcaaagtgccatggtgtcccgactttcactgtacgcacattgcacggggagcacacgtgcgacggtgtgcgtgacttgcatcatcaccaggctaccgttggttgggttgctaggtccgttgaggcaacgctaagagataacccacagtataagccaaaagagatattgcaggatatccgagagcagcatggagtagcagtttcttatatgcaggcatggcgtgggaaggagagaagcatggctgctgttcatggcacccttgaggatggatatcgctttcttcctgcctactgtgagcagattgtacagacaaatcctggcagtgttgcaatatacaaagggactggaccagataatagcttccagcggctgttcgtgtcgttccatgcatctattcatggtttcttaaatgcatgtagaccccttttggaaattgacaaggcagacctcaagggaaagtatcttgggacattgctatgtgcgtcagctgttgatgctgaaaacatgatgttcccgctagcatttggtattgttgacgctgaaagtgatgaaaactggatgtggtttttttcagaactgaggaagatgcttggagttaacacggataagatgcctgtcttgacgatactatctgaaaggcaatcacaagtggttgaagctgttgaagtaaacttccccactgcttttcatggattttgcttgagatatgtgagtgagaatttccgtgacgagttcaaaaatcctaaacttctgaacattttctggagtgctgtttatgctctaacagcagcagaatttgattcaaaggtaaatgatatggtccaagttcaagatgtcatgccatggttccaacgtttcccaccaaatctctgggcagtttcttactttgagggtatccgatatggccattttaatcttgggataactgagatattatataactgggccatggagtgtcatgagtttcctatagtgcaaactgtggagcatatcaaacaccaactgacctgctggtttgttgaacggcaaaacttggcgctatcatacaactcaattcttgttccatcagccgagaaacttatttctgaagctatcgctgattcaggatgctatcaagtccttcgagcaaacaaggtggagtttgaaatagtctcatctgagcgaacaaacattgtggatacgcaagccaggtgctgctcttgtcgtcggtggcaaatatatggcattccatgtgcacatgctgttgctgcactactttcctgtggtgaagatcctcgcttgtatgcacatgaatgcttcagcataatgaagtatcgggaaacttactcccagccaatctattcaattccagatagaagccaatggaacctcccgttttcttttgcacaaggtgcaggaagcaaagcatatgcggttcttcgcccgcccaagatccggaggcctcctggtcgtcccaaaatgaagattcttaagatagaaagcttgaaacggccaaaacgaatcgttcaatgtggccgatgtcatcttcttggacattctcaaaagaagtgttcgttacgaaactga</cdnaseq>

Protein Sequence

<aaseq>RAVKDMAIAMHFELRVVKSDRSRFIAKCAREGCPWRVHVAKCHG VPTFTVRTLHGEHTCDGVRDLHHHQATVGWVARSVEATLRDNPQYKPKEILQDIREQH GVAVSYMQAWRGKERSMAAVHGTLEDGYRFLPAYCEQIVQTNPGSVAIYKGTGPDNSF QRLFVSFHASIHGFLNACRPLLEIDKADLKGKYLGTLLCASAVDAENMMFPLAFGIVD AESDENWMWFFSELRKMLGVNTDKMPVLTILSERQSQVVEAVEVNFPTAFHGFCLRYV SENFRDEFKNPKLLNIFWSAVYALTAAEFDSKVNDMVQVQDVMPWFQRFPPNLWAVSY FEGIRYGHFNLGITEILYNWAMECHEFPIVQTVEHIKHQLTCWFVERQNLALSYNSIL VPSAEKLISEAIADSGCYQVLRANKVEFEIVSSERTNIVDTQARCCSCRRWQIYGIPC AHAVAALLSCGEDPRLYAHECFSIMKYRETYSQPIYSIPDRSQWNLPFSFAQGAGSKA YAVLRPPKIRRPPGRPKMKILKIESLKRPKRIVQCGRCHLLGHSQKKCSLRN</aaseq>

Gene Sequence

<dnaseqindica>3..1685#ggagggccgtcaaggacatggccattgctatgcatttcgagctccgtgtcgtgaaatctgaccggagccggttcatcgccaagtgcgcgagggaaggctgcccgtggcgtgtgcatgtggcaaagtgccatggtgtcccgactttcactgtacgcacattgcacggggagcacacgtgcgacggtgtgcgtgacttgcatcatcaccaggctaccgttggttgggttgctaggtccgttgaggcaacgctaagagataacccacagtataagccaaaagagatattgcaggatatccgagagcagcatggagtagcagtttcttatatgcaggcatggcgtgggaaggagagaagcatggctgctgttcatggcacccttgaggatggatatcgctttcttcctgcctactgtgagcagattgtacagacaaatcctggcagtgttgcaatatacaaagggactggaccagataatagcttccagcggctgttcgtgtcgttccatgcatctattcatggtttcttaaatgcatgtagaccccttttggaaattgacaaggcagacctcaagggaaagtatcttgggacattgctatgtgcgtcagctgttgatgctgaaaacatgatgttcccgctagcatttggtattgttgacgctgaaagtgatgaaaactggatgtggtttttttcagaactgaggaagatgcttggagttaacacggataagatgcctgtcttgacgatactatctgaaaggcaatcacaagtggttgaagctgttgaagtaaacttccccactgcttttcatggattttgcttgagatatgtgagtgagaatttccgtgacgagttcaaaaatcctaaacttctgaacattttctggagtgctgtttatgctctaacagcagcagaatttgattcaaaggtaaatgatatggtccaagttcaagatgtcatgccatggttccaacgtttcccaccaaatctctgggcagtttcttactttgagggtatccgatatggccattttaatcttgggataactgagatattatataactgggccatggagtgtcatgagtttcctatagtgcaaactgtggagcatatcaaacaccaactgacctgctggtttgttgaacggcaaaacttggcgctatcatacaactcaattcttgttccatcagccgagaaacttatttctgaagctatcgctgattcaggatgctatcaagtccttcgagcaaacaaggtggagtttgaaatagtctcatctgagcgaacaaacattgtggatacgcaagccaggtgctgctcttgtcgtcggtggcaaatatatggcattccatgtgcacatgctgttgctgcactactttcctgtggtgaagatcctcgcttgtatgcacatgaatgcttcagcataatgaagtatcgggaaacttactcccagccaatctattcaattccagatagaagccaatggaacctcccgttttcttttgcacaaggtgcaggaagcaaagcatatgcggttcttcgcccgcccaagatccggaggcctcctggtcgtcccaaaatgaagattcttaagatagaaagcttgaaacggccaaaacgaatcgttcaatgtggccgatgtcatcttcttggacattctcaaaagaagtgttcgttacgaaactgacattagattattgctatcatattgtttatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0595300, RefSeq:Os01g0595300