Os01g0595900

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0595900| Description = Cyclin-like F-box domain containing protein| Version = NM_001050008.1 GI:115438163 GeneID:4325952| Length = 2946 bp|...")
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Gene Name

Os01g0595900

Description

Cyclin-like F-box domain containing protein

Version

NM_001050008.1 GI:115438163 GeneID:4325952

Length

2946 bp

Definition

Oryza sativa Japonica Group Os01g0595900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25013853..25016798

Sequence Coding Region

25013910..25015028,25015166..25015309,25015419..25015787

Expression

GEO Profiles:Os01g0595900

Genome Context

<gbrowseImage1> name=NC_008394:25013853..25016798 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25013853..25016798 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctacgctggtcgccgccggcgggatgagagctaccgagcgcgcccgccacccgcgatcgagccacggtccccgtccgcacctggaccacatcatggctagggcgatgtgcgcccacgccatggaggagtcgacggacaccatggagggcatcatgcgcgtcgtcctcacctgcctccccaccccggcgcccttctccacatcccacggctccctctcttcctcggcgggcggtggcggcggcagcggcggcggcggcgatgaccgcatcagccgccttccgggcgcgctgctctctaacatcgtgtcccgcctcccggccagggacgcggcgcgcaccgccgtgctctccacgcgctggcgccgcgtctgggcgtccacgccgctggtcctcgacgacgtcgacctcctcgacatccccgacgaggacctccggcgcggccactcccaccgcgtcgacctggccgccgccgcctcccgcgtgacccgcgtcctcacctcccaccggggcccctacctctgcgtccacctcacctgctgcaacatggccacccactggccgatgctctcctactggctcagcctcctcgccgccaatggcgtccaggacctcgtcttcgccaaccgcccctacccgctcgacctgcccctccccgtcgatatcctccgcatcccttccctccgcagcctctacctcgcgttctggaccttcccgggcatccccggcggcgcgcgcggcccccacgtcttcccgcacctccgggagctcggcctctgcttcatcagcatcgacgcccaggacctcgacggcttgctccagtgcagccccgtcctggagacgctcgcgctcgtctccaactcctactcccccgctcacatccgcgtgcgcagccgcaccctccgctgcgtgctcttctggatgtcgctggcgcaggagatcgccttggtcgtcgccccgcgcctcgaccgcctcatcctgtggaagacgttcatgggtttccccggcgaaatcttttgccgcacaagggtcaagattggttacgccacagagctgcgagtcctgggctacttggaaccaagaatgcacgagctggagatcggcaataccaccatcgaggctggaacaaagatgagttcagataaaacggtaccaagtgtcaaaatcttggccttgaaggtgcgatttgggatccgcaatgaagccaagttgctgcccgtctttctcagatgctttcccaatgttgagacattacatgtcatgtcagatgatgctcatgatcctaccggcaagctcaatctcaagttctggcatgacgtcggcccaatcgagtgcctgcactcacacgtcaataaggtggtgtttcacatgttcagaggggagcggagcgagctcgcgttcctcaagttcatcctggagagggccgaggcattgcagaagattgtggttgtgttggccaacagagaccaggcctgggtggacgagatgcgcgccaagctgaggcccctggccatggcgaaaagggccagcaagaaccctacgctcttgatcgttgcgcttgaaggtggtagtgcttggtccttccacagagcatccgatctctctgtgaatgacccttttgactactgctga</cdnaseq>

Protein Sequence

<aaseq>MPTLVAAGGMRATERARHPRSSHGPRPHLDHIMARAMCAHAMEE STDTMEGIMRVVLTCLPTPAPFSTSHGSLSSSAGGGGGSGGGGDDRISRLPGALLSNI VSRLPARDAARTAVLSTRWRRVWASTPLVLDDVDLLDIPDEDLRRGHSHRVDLAAAAS RVTRVLTSHRGPYLCVHLTCCNMATHWPMLSYWLSLLAANGVQDLVFANRPYPLDLPL PVDILRIPSLRSLYLAFWTFPGIPGGARGPHVFPHLRELGLCFISIDAQDLDGLLQCS PVLETLALVSNSYSPAHIRVRSRTLRCVLFWMSLAQEIALVVAPRLDRLILWKTFMGF PGEIFCRTRVKIGYATELRVLGYLEPRMHELEIGNTTIEAGTKMSSDKTVPSVKILAL KVRFGIRNEAKLLPVFLRCFPNVETLHVMSDDAHDPTGKLNLKFWHDVGPIECLHSHV NKVVFHMFRGERSELAFLKFILERAEALQKIVVVLANRDQAWVDEMRAKLRPLAMAKR ASKNPTLLIVALEGGSAWSFHRASDLSVNDPFDYC</aaseq>

Gene Sequence

<dnaseqindica>58..1176#1314..1457#1567..1935#gccctctctcttcctcggcaccggccggccggagcgagacgccgccagccgccggcaatgcctacgctggtcgccgccggcgggatgagagctaccgagcgcgcccgccacccgcgatcgagccacggtccccgtccgcacctggaccacatcatggctagggcgatgtgcgcccacgccatggaggagtcgacggacaccatggagggcatcatgcgcgtcgtcctcacctgcctccccaccccggcgcccttctccacatcccacggctccctctcttcctcggcgggcggtggcggcggcagcggcggcggcggcgatgaccgcatcagccgccttccgggcgcgctgctctctaacatcgtgtcccgcctcccggccagggacgcggcgcgcaccgccgtgctctccacgcgctggcgccgcgtctgggcgtccacgccgctggtcctcgacgacgtcgacctcctcgacatccccgacgaggacctccggcgcggccactcccaccgcgtcgacctggccgccgccgcctcccgcgtgacccgcgtcctcacctcccaccggggcccctacctctgcgtccacctcacctgctgcaacatggccacccactggccgatgctctcctactggctcagcctcctcgccgccaatggcgtccaggacctcgtcttcgccaaccgcccctacccgctcgacctgcccctccccgtcgatatcctccgcatcccttccctccgcagcctctacctcgcgttctggaccttcccgggcatccccggcggcgcgcgcggcccccacgtcttcccgcacctccgggagctcggcctctgcttcatcagcatcgacgcccaggacctcgacggcttgctccagtgcagccccgtcctggagacgctcgcgctcgtctccaactcctactcccccgctcacatccgcgtgcgcagccgcaccctccgctgcgtgctcttctggatgtcgctggcgcaggagatcgccttggtcgtcgccccgcgcctcgaccgcctcatcctgtggaagacgttcatgggtttccccggcgaaatcttttgccgcacaagggtcaagattggttacgccacagagctgcgagtcctgggctacttggaaccaagaatgcacgagctggagatcggcaataccaccatcgaggtgtgtgagcttagtgatctgctccatctcaattttatttcatcagctcatatttgccaatagcaatacatggtgtcaaactatgcaatttcctttgctgatccatgggcatattgcaatcttgatttgtattctaggctggaacaaagatgagttcagataaaacggtaccaagtgtcaaaatcttggccttgaaggtgcgatttgggatccgcaatgaagccaagttgctgcccgtctttctcagatgctttcccaatgttgagacattacatgtcatggtgagattctactcactctcatttagttattgtataatgtctgattgcccccactgcgtgaacaatccgtggttactatcgatattgttgattctctatttgtctgcagtcagatgatgctcatgatcctaccggcaagctcaatctcaagttctggcatgacgtcggcccaatcgagtgcctgcactcacacgtcaataaggtggtgtttcacatgttcagaggggagcggagcgagctcgcgttcctcaagttcatcctggagagggccgaggcattgcagaagattgtggttgtgttggccaacagagaccaggcctgggtggacgagatgcgcgccaagctgaggcccctggccatggcgaaaagggccagcaagaaccctacgctcttgatcgttgcgcttgaaggtggtagtgcttggtccttccacagagcatccgatctctctgtgaatgacccttttgactactgctgaagctcaagatgatcaggtttcagtatgacagtacctacatgacagccagttagccattttcagatgcttgacaaattttgcacgacctatatcagctctgacaaggataagcagaatttgctgtcacaactagtaagtcttaacaaatactattttattcttggagaatgggaagcttcatgcttcagtaactacataatgccagatattctttcagatgatacagtagataataggcatgtcttatgttttactagcacagacaatgtcagctcccacaagcatgagcacatatttggctgtaacaagcatgagtacaactcttaacttgtggtctgtggaagtgagatttttgttgccacacatgccgggtataggtgaaagtttgcagaaactactcatatcaacacatatatttgcaagagctactttcgatcgtcgtgtcatgtatgctcacaaactgaattgaagcattgttgatgcaactttggttatctgcaaggtttaactagctgtttgctgctatagatgtgtggtccaatggttcatctttgatcagagtgcattgtgtatggctgtgtgctgtgcatggaatcatattgtcatagctgttaacatggtacaaattactcctagcatgtgaatagaaaccatgtgtgtggtcacttggattggttgtccacattggactatcaggctgccctggtgttcgtgaagttgtaaccaaacgtaggcacaagcagctgcagggctcctgagcaatttggctggattatctgatagcagatcaggttttctcaatgttttgtttccggggtgacatgtgcatatatcacttttggttccggggtgatagcagagcaggatgcacacaatcatgaagacttatatggcacttggtaacaaatgtacaataatagacgctcagaagcttcctttgctcatctgtatctaaattatctgtcagttctggagaacaatcagaaaaaaaaaaggtgaagcttccttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0595900, RefSeq:Os01g0595900