Os01g0596000

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0596000| Description = Cyclin-like F-box domain containing protein| Version = NM_001050009.1 GI:115438167 GeneID:4325953| Length = 1707 bp|...")
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Gene Name

Os01g0596000

Description

Cyclin-like F-box domain containing protein

Version

NM_001050009.1 GI:115438167 GeneID:4325953

Length

1707 bp

Definition

Oryza sativa Japonica Group Os01g0596000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25017472..25019178

Sequence Coding Region

25017472..25018440,25018546..25018692,25018783..25019178

Expression

GEO Profiles:Os01g0596000

Genome Context

<gbrowseImage1> name=NC_008394:25017472..25019178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25017472..25019178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatggacacgatcctccacttggtctactcctccctccccgaaaatcccgtctcccccaccgccaccctctccgccgccttcacttcctcctcatccgccgggggcggcggcgaggatcgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaaggatgccgcccgcaccaccgcgctctcctcccgctggcgcggaatctggcgctccacccctctcgtcctcatcgacggcgacctcttcccgcaggggccgcacatctccgccgccgccggcgcgtccctccgcagcatcagggacgctgtcgcgaacgccgtgacgcgcgtcctcgcctcccacccgggtcccctccgcttcgtcggcgtcatcaacttcttcctgggccggcacgtcgacgcgctcgcggactggctccgcctcctcgcggccaagggcgtcgaggacctcgtgctcgtcaaccgcccgtggccgctcgacgtgagaatcccggacaccatcctccgctgcgcctccctccgccgcctctacctgggcgtcttccgcttcccggacaccaccggccacccacgcggccccgacgtcttcccccacctccaggagcttggcatctgccacaccatcatggatgacggggacctcgaccacgtgctcgcctgctgccccgcgctggagaagctcgcgctcgtcgccggctacggcaccccctcgcgcgtccgcgtcgagagccgccacagcctccggtgcgttctgctctggtggtccatgatcgacgagctcgccatcgtcgacgccccgtgtctagagcggctcatcctctgggggacgtacccctgcgaggaagaacccatcaagatcgagataggctacgctccgcagctcaccgtgctcggttacttggacatgggcatccacgcgcttcatatcggcggcatgattatcaaggctggggtgacggatgtgagcccgatggcaaaagttcctagtgtgaagatattgggcataaatgtgaattttgaagcccgcaaggaaatggagattttgcccagtttcttgagatgctttcccaatgttgaggcacttcatataaagtataatgtggatgagtccaatggcgagctcaactccaagttctggcaggaggttgggcatatagaatgcgtggagtcgagcatcaagaaggtggtgttcgatcagttcagagggggtgccaacgagctcgaattcatcaaattcattctggagagggctcaaatgctggacaagatggtgtttgtcgtggatcctgagaattcggcttttgtggatcaggccatgagcacaatgaagtcactagcttccacagactataccagtgccagtaagaagtgttcactgatgatggttggatatagaaaaggtcctcccgcgttcagctacatgagagcatctgatctttctctgagtgacccattctttgtttcgaaggatatacaagtgaccgtttaa</cdnaseq>

Protein Sequence

<aaseq>MTMDTILHLVYSSLPENPVSPTATLSAAFTSSSSAGGGGEDRIS ALPDDLLRHIVSRLPTKDAARTTALSSRWRGIWRSTPLVLIDGDLFPQGPHISAAAGA SLRSIRDAVANAVTRVLASHPGPLRFVGVINFFLGRHVDALADWLRLLAAKGVEDLVL VNRPWPLDVRIPDTILRCASLRRLYLGVFRFPDTTGHPRGPDVFPHLQELGICHTIMD DGDLDHVLACCPALEKLALVAGYGTPSRVRVESRHSLRCVLLWWSMIDELAIVDAPCL ERLILWGTYPCEEEPIKIEIGYAPQLTVLGYLDMGIHALHIGGMIIKAGVTDVSPMAK VPSVKILGINVNFEARKEMEILPSFLRCFPNVEALHIKYNVDESNGELNSKFWQEVGH IECVESSIKKVVFDQFRGGANELEFIKFILERAQMLDKMVFVVDPENSAFVDQAMSTM KSLASTDYTSASKKCSLMMVGYRKGPPAFSYMRASDLSLSDPFFVSKDIQVTV</aaseq>

Gene Sequence

<dnaseqindica>1..969#1075..1221#1312..1707#atgacgatggacacgatcctccacttggtctactcctccctccccgaaaatcccgtctcccccaccgccaccctctccgccgccttcacttcctcctcatccgccgggggcggcggcgaggatcgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaaggatgccgcccgcaccaccgcgctctcctcccgctggcgcggaatctggcgctccacccctctcgtcctcatcgacggcgacctcttcccgcaggggccgcacatctccgccgccgccggcgcgtccctccgcagcatcagggacgctgtcgcgaacgccgtgacgcgcgtcctcgcctcccacccgggtcccctccgcttcgtcggcgtcatcaacttcttcctgggccggcacgtcgacgcgctcgcggactggctccgcctcctcgcggccaagggcgtcgaggacctcgtgctcgtcaaccgcccgtggccgctcgacgtgagaatcccggacaccatcctccgctgcgcctccctccgccgcctctacctgggcgtcttccgcttcccggacaccaccggccacccacgcggccccgacgtcttcccccacctccaggagcttggcatctgccacaccatcatggatgacggggacctcgaccacgtgctcgcctgctgccccgcgctggagaagctcgcgctcgtcgccggctacggcaccccctcgcgcgtccgcgtcgagagccgccacagcctccggtgcgttctgctctggtggtccatgatcgacgagctcgccatcgtcgacgccccgtgtctagagcggctcatcctctgggggacgtacccctgcgaggaagaacccatcaagatcgagataggctacgctccgcagctcaccgtgctcggttacttggacatgggcatccacgcgcttcatatcggcggcatgattatcaaggttcactctgctcatgataattgtttcctgctgtaatttctttgaattgctggataattcttgatgtggagggttttgtaatcgcgcattgatttgtatttgcaggctggggtgacggatgtgagcccgatggcaaaagttcctagtgtgaagatattgggcataaatgtgaattttgaagcccgcaaggaaatggagattttgcccagtttcttgagatgctttcccaatgttgaggcacttcatataaaggttgttgatatgcatgatcagttcatcactgtgtaaaatctgcagctacatgctccatctttgacttaaccagacgcttgcgttttgcagtataatgtggatgagtccaatggcgagctcaactccaagttctggcaggaggttgggcatatagaatgcgtggagtcgagcatcaagaaggtggtgttcgatcagttcagagggggtgccaacgagctcgaattcatcaaattcattctggagagggctcaaatgctggacaagatggtgtttgtcgtggatcctgagaattcggcttttgtggatcaggccatgagcacaatgaagtcactagcttccacagactataccagtgccagtaagaagtgttcactgatgatggttggatatagaaaaggtcctcccgcgttcagctacatgagagcatctgatctttctctgagtgacccattctttgtttcgaaggatatacaagtgaccgtttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0596000, RefSeq:Os01g0596000