Os01g0596700

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0596700| Description = FBD domain containing protein| Version = NM_001050013.1 GI:115438183 GeneID:4325957| Length = 2549 bp| Definition =...")
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Gene Name

Os01g0596700

Description

FBD domain containing protein

Version

NM_001050013.1 GI:115438183 GeneID:4325957

Length

2549 bp

Definition

Oryza sativa Japonica Group Os01g0596700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25065469..25068017

Sequence Coding Region

25065544..25066620,25067169..25067315,25067423..25067791

Expression

GEO Profiles:Os01g0596700

Genome Context

<gbrowseImage1> name=NC_008394:25065469..25068017 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25065469..25068017 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtccgccatgaacatgatcaccgccgccttccgccgatacctcggctgcttctccgccggatcaacccaccgccgccgccgcggcgccgctgaacccgtcctcgccggctcacttacacttcccgccgccgccggcggtgacaacgcggccaggcgccttgatgtcgtcgtccccgcccccagccgccctgatggtgtcactgtgagcggcgaagatttcatcggtagccttcctggccatgtccgctccgccatcgtgtcgcgcctcccggtcgcggacgccgccgctcgcaccggcgtgctgtcgtcgtcgcagtggaacgggctctggtcgtcgacgccgctcgtgttccaggactccgacctcatcctcgccgcgaacttcaccagcgtggcccccgtcgccgccaccgtgtcccgcgtcatcgagaaccacccgggccccttccacaccgtcaccctgaccagctacttcccggagtccgagcgggacaccttcgccggctggatccgcgccgtcgccgccaagggcgtccgcgacctcaccctgcacaacatcccctggtcgggcctccacgtgctccccgccgacctcctccagtgctgcgccgccctggagcgcctccgcgtctgcgtctggcggttcccggccacggccggcgtcctccaccccggcggcggcgacggcgacggcgccgcgccgccgtcgttcccgcgcctgagggagctcgtcctcaacaggagcgccatcgaggaggccgacctggagaacgtggtggcgtgcagcccggcgctgcggacgctggtgctcgccttcagccgtggcgcgccggggcgcgtccgcctcgccagcggcagcctccggtgcgtcgtgctgtgccagtcgctggtggacgagctcgccgtcgtcgccgcgccgctgctggagcggatcgtgctgcggtggtgcgcgtcgggcacccaccacggtcacctcatgaggatcaggatcagccgggcctcgtcgatcaaggcgattggttacctcaaaccaacctgtcatggcctgcatattgatgccactgttataaagcctgggataacggctagccccgatgaagtggctgttccaagcgtcaagatattgggtttacaagttcgatttggagttgctgcggaagcaacgatggtgtcctgcatgctcagatgttttcctaacgttgaaacgctgcatatcatgcctatcgaagatcctcagtctacccagcttgatgactttgagttctgggaggagatcaattcagttgaatgtgtcagatccagcatcaagaaggtagtgttccatgggttctcctggaagaattctgagatagcgttcatcaattccatcgccgaaggaggactggtgctcgagaagatctgtatcttccagagtcgacatggtgctgccccagatgatgatgaactgaatgctaagctgagcatggtagcttctctgaacatcggccttggccgtacagagatcatattttcaggtgaagatccaacctggtgctatagggcggcggctgatctttctcgtgctgatccttttgattgctgccgttga</cdnaseq>

Protein Sequence

<aaseq>MPSAMNMITAAFRRYLGCFSAGSTHRRRRGAAEPVLAGSLTLPA AAGGDNAARRLDVVVPAPSRPDGVTVSGEDFIGSLPGHVRSAIVSRLPVADAAARTGV LSSSQWNGLWSSTPLVFQDSDLILAANFTSVAPVAATVSRVIENHPGPFHTVTLTSYF PESERDTFAGWIRAVAAKGVRDLTLHNIPWSGLHVLPADLLQCCAALERLRVCVWRFP ATAGVLHPGGGDGDGAAPPSFPRLRELVLNRSAIEEADLENVVACSPALRTLVLAFSR GAPGRVRLASGSLRCVVLCQSLVDELAVVAAPLLERIVLRWCASGTHHGHLMRIRISR ASSIKAIGYLKPTCHGLHIDATVIKPGITASPDEVAVPSVKILGLQVRFGVAAEATMV SCMLRCFPNVETLHIMPIEDPQSTQLDDFEFWEEINSVECVRSSIKKVVFHGFSWKNS EIAFINSIAEGGLVLEKICIFQSRHGAAPDDDELNAKLSMVASLNIGLGRTEIIFSGE DPTWCYRAAADLSRADPFDCCR</aaseq>

Gene Sequence

<dnaseqindica>76..1152#1701..1847#1955..2323#gattcccccttctcctccacaccaccgcgcctcactagcctcgtgccctcgtagctgccctcgcgcgccaccaccatgccgtccgccatgaacatgatcaccgccgccttccgccgatacctcggctgcttctccgccggatcaacccaccgccgccgccgcggcgccgctgaacccgtcctcgccggctcacttacacttcccgccgccgccggcggtgacaacgcggccaggcgccttgatgtcgtcgtccccgcccccagccgccctgatggtgtcactgtgagcggcgaagatttcatcggtagccttcctggccatgtccgctccgccatcgtgtcgcgcctcccggtcgcggacgccgccgctcgcaccggcgtgctgtcgtcgtcgcagtggaacgggctctggtcgtcgacgccgctcgtgttccaggactccgacctcatcctcgccgcgaacttcaccagcgtggcccccgtcgccgccaccgtgtcccgcgtcatcgagaaccacccgggccccttccacaccgtcaccctgaccagctacttcccggagtccgagcgggacaccttcgccggctggatccgcgccgtcgccgccaagggcgtccgcgacctcaccctgcacaacatcccctggtcgggcctccacgtgctccccgccgacctcctccagtgctgcgccgccctggagcgcctccgcgtctgcgtctggcggttcccggccacggccggcgtcctccaccccggcggcggcgacggcgacggcgccgcgccgccgtcgttcccgcgcctgagggagctcgtcctcaacaggagcgccatcgaggaggccgacctggagaacgtggtggcgtgcagcccggcgctgcggacgctggtgctcgccttcagccgtggcgcgccggggcgcgtccgcctcgccagcggcagcctccggtgcgtcgtgctgtgccagtcgctggtggacgagctcgccgtcgtcgccgcgccgctgctggagcggatcgtgctgcggtggtgcgcgtcgggcacccaccacggtcacctcatgaggatcaggatcagccgggcctcgtcgatcaaggcgattggttacctcaaaccaacctgtcatggcctgcatattgatgccactgttataaaggtaatctagctagctacttccatttattgattattagttatattttgagtttttatctgtacagatttgtggattagtatacttgggggctttttagatggagtgtttgtacttctgaggcactataggagtagcaaagttcacattattttttgaaacgagtagcatcaaagatagtcatgtttcatattgataaagcatggacaaaatttgcattaatttgtatcggaacctcaatagagcatggttgtacctagcctgtcagataattttgggggaaactttttccccattttaagtgataacttcatattctctcatactacctaatagataattgcatcagaaacataagatactagtcgatcaggaatgagaagcaataggaagttgttgctttgttggttatatttatttaaattttcaccaaaatttctttgttgcattcaaaattatattacagaggggattccaaattaacatatgtcattgccttgttttttttttttctctttgctctctccgatgtttacatctatttactgtagcctgggataacggctagccccgatgaagtggctgttccaagcgtcaagatattgggtttacaagttcgatttggagttgctgcggaagcaacgatggtgtcctgcatgctcagatgttttcctaacgttgaaacgctgcatatcatggtaaggcataaaattcaatttgtcttgcttgaatttgcctcaatcagatcgaacaaaaattcagcgctcttgatatattataatctgaacactggttaatttggcagcctatcgaagatcctcagtctacccagcttgatgactttgagttctgggaggagatcaattcagttgaatgtgtcagatccagcatcaagaaggtagtgttccatgggttctcctggaagaattctgagatagcgttcatcaattccatcgccgaaggaggactggtgctcgagaagatctgtatcttccagagtcgacatggtgctgccccagatgatgatgaactgaatgctaagctgagcatggtagcttctctgaacatcggccttggccgtacagagatcatattttcaggtgaagatccaacctggtgctatagggcggcggctgatctttctcgtgctgatccttttgattgctgccgttgaagatcgatgtctctgtgctttgatcatcttcgtactatatatacattttgtgcttcagaatgtcacacagtctgcaaaggttgctcaaggtagttatatagcgaataaatatgtgacatctggaaattttatcatgtgtgtgtaccagttaaattctatcctgtggtattaataaatggtactggcgaggcagtgtgcaacgctttgtactgctggattgtgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0596700, RefSeq:Os01g0596700