Os01g0597400

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0597400| Description = Amino acid/polyamine transporter II family protein| Version = NM_001050014.1 GI:115438187 GeneID:4325958| Length = 1...")
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Gene Name

Os01g0597400

Description

Amino acid/polyamine transporter II family protein

Version

NM_001050014.1 GI:115438187 GeneID:4325958

Length

1889 bp

Definition

Oryza sativa Japonica Group Os01g0597400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25096355..25098243

Sequence Coding Region

25096355..25097143,25097701..25098243

Expression

GEO Profiles:Os01g0597400

Genome Context

<gbrowseImage1> name=NC_008394:25096355..25098243 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25096355..25098243 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggataagagccctatcgacgaggctctcctacatggcaaacacgaagaggctctcctacatggcaaacacgagcacgtggagcagcagctcctccccaccagcggcggctcattctgcatcaccggcgcttccttcgggaggagttgcctcaacctgagcaacgtgatatctggcatcgggatgctctccgtgccgtacgcgttgtcgcagggcgggtggctcagcttggcgctcttcgccatggtcggcgccatctgcttctatactggcaaactcatctatcgctgcatgcgcgccgaccgttgtgtacggagctacccggacatcggctacctcgcctttggccgttacggccggacagctatcggcctcatcatgtatgtcgagctctacctcgtcgccatcagcttcctcatcctcgagggcgacaacctcgacaaactcctccccggcacggtggtgaagatcctggggtaccaagtgcatgggaagcagctgttcatgctcgtggcggctgccgtcatcctcccgacgacgtggctcaagaacctgagcatgcttgcctacgtctcggcggttgggctcgtctcgtcggtggcgctgacggtgtcgctggtctgggccggcgtggccgacaagggcttccatatggcgggcagtagtatcttgaatctcagcgggttgcccaccgccctcagcctctacttcgtctgcttcgctggccatggcgtctttccgaccgtgtactcctcaatgagggccaggaaggattttcctaaggttttgctgatctcttcggtgttgtgcagtctcaactacgcagtgacagcagtgttgggatataagatctacggtgaggatgtgcaggcgcaggtgacactaaacttacccacgggaaagctgtacaccaggattgccatcctaacgaccctgatcaccccactggcgaagtacgcgctcgtgatccagcccgtcacgaccgcgatagaggagaagctgtcgacagcggcggcggcggtagcggctgatgccgaaaacaataggctaaccagggtgctcaccagcacaaccgtcgtcttcagcacggtggtgctggcatgcacggtgcccttcttcggctacctcatgtcgttcatcgggtcctcattgaacgtcactgtcgccgtcctgttcccgtgtctgagctacctcaagatctacatgcctcgaggaggagttggccgcttcgaggtggcggcgatcgttgggatactggtcatcggagtgtgtgtcgccgtcattggcacctacacctcccttcaccagattataggcacattttga</cdnaseq>

Protein Sequence

<aaseq>MAADKSPIDEALLHGKHEEALLHGKHEHVEQQLLPTSGGSFCIT GASFGRSCLNLSNVISGIGMLSVPYALSQGGWLSLALFAMVGAICFYTGKLIYRCMRA DRCVRSYPDIGYLAFGRYGRTAIGLIMYVELYLVAISFLILEGDNLDKLLPGTVVKIL GYQVHGKQLFMLVAAAVILPTTWLKNLSMLAYVSAVGLVSSVALTVSLVWAGVADKGF HMAGSSILNLSGLPTALSLYFVCFAGHGVFPTVYSSMRARKDFPKVLLISSVLCSLNY AVTAVLGYKIYGEDVQAQVTLNLPTGKLYTRIAILTTLITPLAKYALVIQPVTTAIEE KLSTAAAAVAADAENNRLTRVLTSTTVVFSTVVLACTVPFFGYLMSFIGSSLNVTVAV LFPCLSYLKIYMPRGGVGRFEVAAIVGILVIGVCVAVIGTYTSLHQIIGTF</aaseq>

Gene Sequence

<dnaseqindica>1..789#1347..1889#atggcggcggataagagccctatcgacgaggctctcctacatggcaaacacgaagaggctctcctacatggcaaacacgagcacgtggagcagcagctcctccccaccagcggcggctcattctgcatcaccggcgcttccttcgggaggagttgcctcaacctgagcaacgtgatatctggcatcgggatgctctccgtgccgtacgcgttgtcgcagggcgggtggctcagcttggcgctcttcgccatggtcggcgccatctgcttctatactggcaaactcatctatcgctgcatgcgcgccgaccgttgtgtacggagctacccggacatcggctacctcgcctttggccgttacggccggacagctatcggcctcatcatgtatgtcgagctctacctcgtcgccatcagcttcctcatcctcgagggcgacaacctcgacaaactcctccccggcacggtggtgaagatcctggggtaccaagtgcatgggaagcagctgttcatgctcgtggcggctgccgtcatcctcccgacgacgtggctcaagaacctgagcatgcttgcctacgtctcggcggttgggctcgtctcgtcggtggcgctgacggtgtcgctggtctgggccggcgtggccgacaagggcttccatatggcgggcagtagtatcttgaatctcagcgggttgcccaccgccctcagcctctacttcgtctgcttcgctggccatggcgtctttccgaccgtgtactcctcaatgagggccaggaaggattttcctaaggtatagtttttaaaatgtatttatgtgttgtacttggtagtaagtttgctaaaatttgtgataataattaacaatgcaaatttagaattatggttaatgaaattgaaaagtcaattgtggaaataaattagcaacaggtttagtaagaatacaacatattgtttttttattctatgtatgcacggaagacgcacacactcattattattttttagaaatcgtacatcagtatattactaatcatgcacactattagctcatggaagttttcttaaacaattttgatcctttcaccattcttttactgatacttatccatgatctaacgacatatattgtatcaaccgttgcattcaatggtccatattttcatatgatgtagctcaatgatgttgcattttaagttttacctttcacttagagagatttggcaaccaatgataattgatcattggattatcagttccaattatcataatttggtttatgaaaccatgatgatgatgatgatgatgatgatgatgataacgctctattcctctccaattaatgtgcaggttttgctgatctcttcggtgttgtgcagtctcaactacgcagtgacagcagtgttgggatataagatctacggtgaggatgtgcaggcgcaggtgacactaaacttacccacgggaaagctgtacaccaggattgccatcctaacgaccctgatcaccccactggcgaagtacgcgctcgtgatccagcccgtcacgaccgcgatagaggagaagctgtcgacagcggcggcggcggtagcggctgatgccgaaaacaataggctaaccagggtgctcaccagcacaaccgtcgtcttcagcacggtggtgctggcatgcacggtgcccttcttcggctacctcatgtcgttcatcgggtcctcattgaacgtcactgtcgccgtcctgttcccgtgtctgagctacctcaagatctacatgcctcgaggaggagttggccgcttcgaggtggcggcgatcgttgggatactggtcatcggagtgtgtgtcgccgtcattggcacctacacctcccttcaccagattataggcacattttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0597400, RefSeq:Os01g0597400