Os01g0598400

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0598400| Description = Cyclin-like F-box domain containing protein| Version = NM_001050019.1 GI:115438209 GeneID:4325963| Length = 2246 bp|...")
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Gene Name

Os01g0598400

Description

Cyclin-like F-box domain containing protein

Version

NM_001050019.1 GI:115438209 GeneID:4325963

Length

2246 bp

Definition

Oryza sativa Japonica Group Os01g0598400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25166944..25169189

Sequence Coding Region

25167158..25167502,25167739..25167888,25167999..25169060

Expression

GEO Profiles:Os01g0598400

Genome Context

<gbrowseImage1> name=NC_008394:25166944..25169189 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25166944..25169189 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgccgccggcgaggaagggggcatgacctacggggaagtggtggactacttcaactccttgcaggacccgccggcgcaggagcgcatcgactgcatcatcccctacctcatctccctcctccccgcgcccttcgtccccgcgccgcccgacgccgcctccgccgacgactccgaggacgaccacttctccttcacctcgtccgacgactactccgccgccgaagacgcccgctccttcccgtcgccgccgccgggggatggcgaggaggaccacatcagccgcctcgcggacgacctcctctcggagatcatctcccgcctctccaccaaggaagccgcgcgcaccatggcgctgtccacgcgctggcgccgcgtgtggacgaagacctccctcctcgtcgacgacgcgcacctcagggacgccgacaacgaggtctccctcgtccgcgccatctcccgctgcgtggacgcgcacccgggccccgtccgctccgcgcgcatcacccacgtcgccttctaccaccacgagtacgcgctccggcgcctcgtggcgagcctggccgacaaaaacgtcgaggacctcatcctcttcaaccgcccgtggccgctcaacatgccgctccccgacgacatcttccgctgcgcctacctccggcggctgtacctcggcgcatggatgttccccgaagtcgccgctgccgccttagtaaacctccgcgagctcggcctcttccactgcatcatccccgaccgagacttcgacgccctgctctcgctctgcagtaagctggaggtgctctccctcgccatgtcgtacaactgcccgtcgcggctccgcatcaagtccccaagcctccgggccgcggtggagtggatgtccagcctcgacgagattgtcgtcgacggcgcgccatgcctggagcggctgctcctccaccacgccatccccgtcgccgagcgtacgcccatcaagatcgtaagcgcgccaaggctggaggtgctcggcatcctggacctccagctccacgagctccagattggcggcaccaccatcaggcctgggatgtggatgtttgtgaagtctagcgccaagctcccgagcttgaagatacttgctgtcaaggtgtgtttggcgatcgaacgggagatcaagctgctgatgacgctgctcaaatgcttccctcacctcgagactcttcacatcaagtccattcctccatgcgcatcacctgaaatcgcgaattgcgcggatgtttgggaatccctgggttcctgcgaatgcctcaagtcgcatctcaagacagtcagcatccaagggttccacaccgagcgctatgaggtgttgtgcctcaagtacctcatcttggagggggaggtgctcgagaccgtggccttcttctgcgaggataaagtgtgcttcgccgccaaggacgacgaggcggtggagatcgagctgatgtttcccaagaacctcgtccaagatcgctggagcttccagagcgccattgatctgtctctcgacgatcccttcttctacgccgtggagagctga</cdnaseq>

Protein Sequence

<aaseq>MDAAGEEGGMTYGEVVDYFNSLQDPPAQERIDCIIPYLISLLPA PFVPAPPDAASADDSEDDHFSFTSSDDYSAAEDARSFPSPPPGDGEEDHISRLADDLL SEIISRLSTKEAARTMALSTRWRRVWTKTSLLVDDAHLRDADNEVSLVRAISRCVDAH PGPVRSARITHVAFYHHEYALRRLVASLADKNVEDLILFNRPWPLNMPLPDDIFRCAY LRRLYLGAWMFPEVAAAALVNLRELGLFHCIIPDRDFDALLSLCSKLEVLSLAMSYNC PSRLRIKSPSLRAAVEWMSSLDEIVVDGAPCLERLLLHHAIPVAERTPIKIVSAPRLE VLGILDLQLHELQIGGTTIRPGMWMFVKSSAKLPSLKILAVKVCLAIEREIKLLMTLL KCFPHLETLHIKSIPPCASPEIANCADVWESLGSCECLKSHLKTVSIQGFHTERYEVL CLKYLILEGEVLETVAFFCEDKVCFAAKDDEAVEIELMFPKNLVQDRWSFQSAIDLSL DDPFFYAVES</aaseq>

Gene Sequence

<dnaseqindica>1688..2032#1302..1451#130..1191#gactcgtgagagcagcggaattcaaaacgcaaaaaaaaaaaaaaaaagaaaagaaaaagaccctcgcttccgtttcctcctctcccaaactcgcctcgcctcgccttcccgcccgccgccgccgtcgccatggatgccgccggcgaggaagggggcatgacctacggggaagtggtggactacttcaactccttgcaggacccgccggcgcaggagcgcatcgactgcatcatcccctacctcatctccctcctccccgcgcccttcgtccccgcgccgcccgacgccgcctccgccgacgactccgaggacgaccacttctccttcacctcgtccgacgactactccgccgccgaagacgcccgctccttcccgtcgccgccgccgggggatggcgaggaggaccacatcagccgcctcgcggacgacctcctctcggagatcatctcccgcctctccaccaaggaagccgcgcgcaccatggcgctgtccacgcgctggcgccgcgtgtggacgaagacctccctcctcgtcgacgacgcgcacctcagggacgccgacaacgaggtctccctcgtccgcgccatctcccgctgcgtggacgcgcacccgggccccgtccgctccgcgcgcatcacccacgtcgccttctaccaccacgagtacgcgctccggcgcctcgtggcgagcctggccgacaaaaacgtcgaggacctcatcctcttcaaccgcccgtggccgctcaacatgccgctccccgacgacatcttccgctgcgcctacctccggcggctgtacctcggcgcatggatgttccccgaagtcgccgctgccgccttagtaaacctccgcgagctcggcctcttccactgcatcatccccgaccgagacttcgacgccctgctctcgctctgcagtaagctggaggtgctctccctcgccatgtcgtacaactgcccgtcgcggctccgcatcaagtccccaagcctccgggccgcggtggagtggatgtccagcctcgacgagattgtcgtcgacggcgcgccatgcctggagcggctgctcctccaccacgccatccccgtcgccgagcgtacgcccatcaagatcgtaagcgcgccaaggctggaggtgctcggcatcctggacctccagctccacgagctccagattggcggcaccaccatcagggtataactccaaactgttgtgctctgcactttgcaattcagttcgtgattctgcaaccaaacaatttcctctctgttgtttgatttgttgtattgggaatgaaatggcagcctgggatgtggatgtttgtgaagtctagcgccaagctcccgagcttgaagatacttgctgtcaaggtgtgtttggcgatcgaacgggagatcaagctgctgatgacgctgctcaaatgcttccctcacctcgagactcttcacatcaaggtagttgttttagtacacgcggttagcacctgcaagcttacttccactgcattcttctactagtcaaataccaattctagattagatcgagaatataattagatagtagtaccatgttattctgttaatttgcatcgtgtagttgatttgcaatgttcattacttctggttgatatgatagctttcctgattgataagctaagcaaagttctgattgttgctttgctaaattgcagtccattcctccatgcgcatcacctgaaatcgcgaattgcgcggatgtttgggaatccctgggttcctgcgaatgcctcaagtcgcatctcaagacagtcagcatccaagggttccacaccgagcgctatgaggtgttgtgcctcaagtacctcatcttggagggggaggtgctcgagaccgtggccttcttctgcgaggataaagtgtgcttcgccgccaaggacgacgaggcggtggagatcgagctgatgtttcccaagaacctcgtccaagatcgctggagcttccagagcgccattgatctgtctctcgacgatcccttcttctacgccgtggagagctgatgggtctgtgcgtttatggtgtttttgtcatccgacatagatgggttcacaaatctatggatgtagcactgacatactaaattcttcagaaattaacggtgaactctggatgctaatttagtactagttgttaggttctgggttgcggaagtactaaaactttggtgcgtattgttttgggccaaaatccacaatcctgtctcaatttgaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0598400, RefSeq:Os01g0598400