Os01g0600000

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0600000| Description = Similar to Copia-like retroelement pol polyprotein| Version = NM_001050023.1 GI:115438227 GeneID:4324593| Length = 3...")
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Gene Name

Os01g0600000

Description

Similar to Copia-like retroelement pol polyprotein

Version

NM_001050023.1 GI:115438227 GeneID:4324593

Length

3282 bp

Definition

Oryza sativa Japonica Group Os01g0600000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25211114..25214395

Sequence Coding Region

25211398..25211584,25213971..25214152

Expression

GEO Profiles:Os01g0600000

Genome Context

<gbrowseImage1> name=NC_008394:25211114..25214395 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25211114..25214395 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgaggctggcgcagctacggtccaaggcggcgcaggcgtcggagctcgtgtcgaagcacgggtgcgcctactacaaggaggtgatggagaagaacaagcagcacgtggtgcagccacccaccgtggagaagtgccaggagctctccaagcagctcttctacacccgcctcgccagtttgccaggccgctatgaggcattttggaaggaatttgatggtgtcaagcaggtatggaagaatagaaaggagctcaaggtagaggaccttggaattgtgacattatttggagttgagctttatgcgtggttctgcgtaggcgagattgttggcagaggattcaccataaccggctataaggtctag</cdnaseq>

Protein Sequence

<aaseq>MASRLAQLRSKAAQASELVSKHGCAYYKEVMEKNKQHVVQPPTV EKCQELSKQLFYTRLASLPGRYEAFWKEFDGVKQVWKNRKELKVEDLGIVTLFGVELY AWFCVGEIVGRGFTITGYKV</aaseq>

Gene Sequence

<dnaseqindica>2812..2998#244..425#atccacctcgcgacctctcctctcccctccccggcgcttcacccacggtagcaatcactcccccccaaaaccctagcccctccgatccgcccgccgctcgctggcccttccgagtcccggatcggcgcggcggccagatctgctttccccgttcgatctgactcggtttctctcttttccatccgcgtgtgtggtgtggtgttgggtttggttggtgggtgtgggtgtgtgtgtctccaggcgatggcgtcgaggctggcgcagctacggtccaaggcggcgcaggcgtcggagctcgtgtcgaagcacgggtgcgcctactacaaggaggtgatggagaagaacaagcagcacgtggtgcagccacccaccgtggagaagtgccaggagctctccaagcagctcttctacacccgcctcgccaggtgatccccggatttcacccccgctgtgcctgttcatgcggctccatttggtcgctgtttcgtagttggcggtgtgttgcgatctgttggcaattgcgcgccgggggggggggggtgttcaggcttgggtgttccgacgaatgtagcttggcacgatcgaaaattcgccaataattggtgggtatccaaattatcgtgcctccgattactctagtttaacctgaatttggtatggcttgctctgctcatggtctgcaatttgggtagtcagggtgagcctacatagtggttagtagatttcgctagacgatgggttttttttttgttgtctggtagtctggttgtgcacttgtgcttttgttgttgtcatgacctattaggggtttgagagctcccttccatacttgcactttataaatcttaatcatttgagttgaccatttgttcacacgctcctccctttatgaattgtgcttgtgtaacttgttgcatgtataaacttcggagagctcgtaaccatgtgttatgaggctgtttgaatgttttggcctgtgggatgcgtgatgttctccttgaaatacgctacctgctagtacattgttttggtcagacttgctatgctcaataatttggtgaaagaggataggcacagtattaattatggaactacttattaagagtgcatttcatctggtcatgcaggcactgagttctgtaagacccataatctgtcagttttgaaagtttgtaacaaaagaaacctatgcaataagtatgatatacctgaggctcttactgtatattccttgttacctttgtatttttgcttggatccatggttcatgaagacatagaacgatgcattactgttaggcgaaagtgtgagaagtcaaatacaccgagtgaaatgtgaaatctattgtggatgatacataatgacaaaatggaatggtatgtattttgtatgatttaagaaatgaacttatatcaatattgctgtggtaattacattagcagtttgttcagtatgtttgaaattatttcttgtttgtttgtttctgcagaaaaggcattgcagtaaaatctattaccaatttactttatgggatttacctaattactatgaactataatacaaaatctacattagtccattgtctgttctgagaatgttatagaggtacagctctgtcataaatctgtaggataagatgaatgcttttctgggcctcagtcttctattctttttcacttggcaaccagctgtgtttagaataaaaaaagtgacaacaattcaagtgtggatgcaatattaggctttatcacggaaaagttatttcttgaatcccaatccagtggccgcactttagcctgctttattattgtgacgaacattgttttttctgattgctgtataatgatgctaatccttgtttgtgtacatggtttgatgagtggtgttgttcagtgtgggagctgatgacagaacaaactggctaggtcagtgatcactgatcagtctggtttacagaactttgttgtatacatgatgtgcaaccaataacatgcgatttagttagtatcttgtctgcaatgtttcaagtcatgattgataattctggctagcaatcacgtctgttaaattaaggctgagcaatttcttcacgtgttataaattgatgttgaaatgttttgaggttggtcaggagcagctattatttttatttttacacgtttttgcattagaattttgtatgttgtttccattttttttcattagggctcttaatcaaggcactatctccaatactgtagcagatggtgtaccttttgaccatcttctgctgtgatgttagaattagggctcaccaggttgaaactatactggtcaattcaggctggtccaaagagcatgcatgagacaatgagatggacgggacacatcttctgtgatttgccggtgcccatgtctacctatcatgagggaaatgaacggattgacgaactttgggtaaactggatttgtttactcttaactttgaatgattaattaagatgtcatgttagcccttagatgcatatgcatagggaccagtcacgtgcttgttgtggattgttggatggagaagttgcaaggtctgcacttgataggcaaagcaattgtgcatgtatttatgaatgtgtatcaacttgggtggagcattgtgcttttaacctttttttctttttctttttttttggggggtggggtggggggggggtgtctgccatattttcttgaacaagtcaagtcatcgattctgcattgtgaatatgccttcgttactatgcttgtttactttggagctctgatctcaatgacttatatggctgttgttttcttcagtttgccaggccgctatgaggcattttggaaggaatttgatggtgtcaagcaggtatggaagaatagaaaggagctcaaggtagaggaccttggaattgtgacattatttggagttgagctttatgcgtggttctgcgtaggcgagattgttggcagaggattcaccataaccggctataaggtctagaagagttctgattaagacctggtttataaaatacactgttagctgatgcttgtcgaaatgacaaagatacctcctgccttttcacaattttgtttatggaaagtctttctagtgctggatgtcagccaagacgagcacatcgttgcaacactgcttcaataatttgctcgatctctcgattgccattttggtgtcctgtaatgtgaaatactgaaattccatcttgccccacccgtcaaattgtcatttatttgttctcttgaatccatctcaaactgcaagac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0600000, RefSeq:Os01g0600000