Os01g0600900

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0600900| Description = Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP)| Version = NM_001050028.1 GI:115...")
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Gene Name

Os01g0600900

Description

Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP)

Version

NM_001050028.1 GI:115438249 GeneID:4324599

Length

1179 bp

Definition

Oryza sativa Japonica Group Os01g0600900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25264209..25265387

Sequence Coding Region

25264279..25265064

Expression

GEO Profiles:Os01g0600900

Genome Context

<gbrowseImage1> name=NC_008394:25264209..25265387 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25264209..25265387 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccaccatggccctctcgtccccggcgctggccggcaaggccgccgcgaaggtgttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgttcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgggctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcctgatccacgcgcagagcatcctcgccatctgggcggtccaggtggtgctcatgggcgccgtcgaggggtaccgcatcgccggcgggccgctcggcgaggtcgtcgacccgctctaccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccaccaacttcgtccccggcaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSP WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQ VVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK</aaseq>

Gene Sequence

<dnaseqindica>71..856#acagcacgcacacacaccccaccagcagcagcagcagtagctgagcttgaagcagcagagcgaggtagacatggccgccgccaccatggccctctcgtccccggcgctggccggcaaggccgccgcgaaggtgttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgttcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgggctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcctgatccacgcgcagagcatcctcgccatctgggcggtccaggtggtgctcatgggcgccgtcgaggggtaccgcatcgccggcgggccgctcggcgaggtcgtcgacccgctctaccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccaccaacttcgtccccggcaagtgagcgccgccgccgccgtgctgccatggcgacgcatcgccttcagctaagctagctaggttgacgacgatgcgcgtctctgcaggagagtgtgcgtgtgtgtacgcggtgcagtagatgtacgtacgtgtaccgtatagatgtacgtattcgtgtggaccgcgtggatggatgtacgagtattggagagagggtgagatctgtaccggtagtgtgtatttctgtgcaggttctgaacctgatcaatgaaatatggtgttgtgaattaattataaaattagcttgtttaatcctgcgtgctacttaatgatataataattcttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0600900, RefSeq:Os01g0600900