Os01g0601000

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0601000| Description = Conserved hypothetical protein| Version = NM_001050029.2 GI:297597143 GeneID:4324600| Length = 4199 bp| Definition ...")
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Gene Name

Os01g0601000

Description

Conserved hypothetical protein

Version

NM_001050029.2 GI:297597143 GeneID:4324600

Length

4199 bp

Definition

Oryza sativa Japonica Group Os01g0601000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25267905..25272103

Sequence Coding Region

25267905..25268303,25268473..25268676,25268770..25268839,25269106..25269165,25269249..25269346
,25269438..25269626,25271405..25272103

Expression

GEO Profiles:Os01g0601000

Genome Context

<gbrowseImage1> name=NC_008394:25267905..25272103 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25267905..25272103 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaacggcgagcctctctggcacggcgtccgccatggcggcggcggcggcgacgctaggaagcagcaccaccaccaccaccagctcagtcacggcttcggcgccaaggatgcctctgcgtcctcgccgtggtcgtcgtccgacggcctgtggaccgacggcctcgtctgcgccttcgagttcgtgcgcggcggcggcggcgcccatggcttcgttaccccggccaacttgtgccggagcaagtgctgctccttgctgcagtccaaggacctcgccgtccaggaccgcaggagatcactcgcggccaagatcggagacaacggcgacgaaccgaggccgccgacagtggcgccggcggagagcttgtgggcgccgatcgggtggaggaggatcacgcagctggtggggatggtgggaggggacgccgcggcgtggcacgacgacgggcagagcatgagcctcatggagcacgacggcggcggcgacgagcagtgcgacgacatcaccgtcgccgacgtcgccgcgccgtactggcagagggcggcggggcccacctggtggtgccacgtggcggcggggcacccggcggtggacgcgtggctggccgccgcgcggtggctccacccggcgatctgcgtggcgctcagggacgagagcgtgctcatcagtgagaagatgaagcatctgctctacgaggtccctgtaagagttgcaggaggcttgctatttgaactgttggggcagtcggttggtgatccagctcgtgacgaagaagacattccaattgtgctccgtgcttggcaagctcaaaattttctgataactgcacttcacgtgaagggatctgcaccaaacgttaacgtcattggagttactgaagttcaggagcttctttctgcctgtggaagtacaggtacagctcctaaaaatattcaggaagttatagcacatttggcttcacggcttgcccgatgggatgacagattgtggcgtaaatatgtcttcggtgccgctgatgaaatagaacttaaatttgtaaacaggcgaaagcaagaagatttgaaactgttgtgcatgatatttaaccaagacattagaagattggccactcaggttatcagagtgaaatggtcactgcatgctagggaggagataatttttgagctgctgaagtatctaggaggcagcaccacaaaatcattacttgaagcgataaagaaagacgcaagacaaatgattgaagagcaggaggcagttcgtggccggctcttcaccatccaagatgtgatgcagagcaccctccgtgcttggtcacaggagaagagccttcgcattacgcataacctgacaattttcggtgggtgtggcttggttctgtccatcatcgccggattgttcggaatcaatgttgatgggataccaggagctgagaacactccctacgctttcgcgctattctccgcgctgcttttcttggtaggactcctgctgatcatcgtggggatagtctatttcggactgcagaagccgatcagcgatgagcaggtccaggtgaggaagttagagctccaggaactggtctcgatgttccagcacgaagccgagacacacgccagggtgaaagaaggggtcttgaggactgacttgcctcccagagctgccgatctcatatgtgatgataatggtgattcacgtctccttgtttgtgactgttga</cdnaseq>

Protein Sequence

<aaseq>MVNGEPLWHGVRHGGGGGDARKQHHHHHQLSHGFGAKDASASSP WSSSDGLWTDGLVCAFEFVRGGGGAHGFVTPANLCRSKCCSLLQSKDLAVQDRRRSLA AKIGDNGDEPRPPTVAPAESLWAPIGWRRITQLVGMVGGDAAAWHDDGQSMSLMEHDG GGDEQCDDITVADVAAPYWQRAAGPTWWCHVAAGHPAVDAWLAAARWLHPAICVALRD ESVLISEKMKHLLYEVPVRVAGGLLFELLGQSVGDPARDEEDIPIVLRAWQAQNFLIT ALHVKGSAPNVNVIGVTEVQELLSACGSTGTAPKNIQEVIAHLASRLARWDDRLWRKY VFGAADEIELKFVNRRKQEDLKLLCMIFNQDIRRLATQVIRVKWSLHAREEIIFELLK YLGGSTTKSLLEAIKKDARQMIEEQEAVRGRLFTIQDVMQSTLRAWSQEKSLRITHNL TIFGGCGLVLSIIAGLFGINVDGIPGAENTPYAFALFSALLFLVGLLLIIVGIVYFGL QKPISDEQVQVRKLELQELVSMFQHEAETHARVKEGVLRTDLPPRAADLICDDNGDSR LLVCDC</aaseq>

Gene Sequence

<dnaseqindica>3801..4199#3428..3631#3265..3334#2939..2998#2758..2855#2478..2666#1..699#atggtgaacggcgagcctctctggcacggcgtccgccatggcggcggcggcggcgacgctaggaagcagcaccaccaccaccaccagctcagtcacggcttcggcgccaaggatgcctctgcgtcctcgccgtggtcgtcgtccgacggcctgtggaccgacggcctcgtctgcgccttcgagttcgtgcgcggcggcggcggcgcccatggcttcgttaccccggccaacttgtgccggagcaagtgctgctccttgctgcagtccaaggacctcgccgtccaggaccgcaggagatcactcgcggccaagatcggagacaacggcgacgaaccgaggccgccgacagtggcgccggcggagagcttgtgggcgccgatcgggtggaggaggatcacgcagctggtggggatggtgggaggggacgccgcggcgtggcacgacgacgggcagagcatgagcctcatggagcacgacggcggcggcgacgagcagtgcgacgacatcaccgtcgccgacgtcgccgcgccgtactggcagagggcggcggggcccacctggtggtgccacgtggcggcggggcacccggcggtggacgcgtggctggccgccgcgcggtggctccacccggcgatctgcgtggcgctcagggacgagagcgtgctcatcagtgagaagatgaagcatctgctctacgaggtgagctttaccttaccatacttctccgcggttttctactccaaattttctaccgaaagctagaaagaaatccagcactgcactacccaagagattgggtaattcatccattttctactgttttatatgtttaaggtaccattttttagagggaaagccaaaagaggccggctttttgatagaaagcaccatgtcttggtactatttgtatgcaaatcattatgactacatatgttcaactagcatggtggcccgtgcagattgcgcggctagcatcattatattttctctcatataatatcatatatgttttcttattatattattaaaatatattacaatgacaacataatattaaattttgcaataactttacgaaactactcatgtgtaataactactctagtcttctcttctaatattccttattttctaattctgaatttcaactatttctaaattgtatttctatatggactctgctttttctttttctccgattaatgtgagaatttctaggccataagagcgaacgtggaggctcctttttattccggattttagttggttttaaattccaatatggactctatactctacttctaatattccttattttttaattccaaatttctttttttttcttaattgtatttctatatggactctatgctctacttctaatatttcttatttttaattccgaatttcagttatttcgtaattgtatttctatatggactctagtctcttttctaatattccttatttttttaattccgaatttcagttattttctaattgtatttctatatggactctagtatcctcttctaatattccttattttttaattctgaatttcaactatttctaaagtgtatttctatatggactctagtcaccttttctaatattccttattttttaattccgaatttcagctatttctaaattgtatttctatatggactctgttttttttctttttctccgattaatgtcagaatttctaggccatgagagcgaacgtggaggcttctttttctattactttaattatataatagattttgagtctattgatgttctatctagaattaaacactctttcgtgcgtaaacgcttgtaagccaatttgtgtaataattggctgtagcaagttaagcaaaggcataaaatatattccattatctaaaaatatatgttcatttagatatgtaggagactacgagtgtcaatgtttcagtgtgactctactgccacttcttagcttgaatgtctgaaagactgaaactctttgatgatttcatatgggctactcatttcggtgacccccgatacgatattaattcggccgaagtttttgaatttttcaattttttcatgaatttggataatatttgttcaaattcaattaaattttgttcaaaatttcggaaatttcggaccaaaatttccgaaatttcaggatttcggtgacccccgatggaaaccccagaaccaatagagtgaaccctgctcccatgtactacatgcacaattgcggaatgtcctgaattagtgtgtctacctagatgcagtatttatctaagcttactgttacttggaatattgtctggattttcttcacttgatagtgtagtggcaaggggcatgtggtttcaaccctaaggtctcgtgttcaatccccagcacacttacaatttcttcttgaaaaatatttggagggacgtctctccctccaaacctcgtatcttttttttaacttatttcaggtccctgtaagagttgcaggaggcttgctatttgaactgttggggcagtcggttggtgatccagctcgtgacgaagaagacattccaattgtgctccgtgcttggcaagctcaaaattttctgataactgcacttcacgtgaagggatctgcaccaaacgttaacgtcattggagttactgaagttcaggtggtagctcatatatatatatattaagccgtttcgctcagcaatcttccttctttaacccattgtcttgcatgtttcccgtgttgtttaggagcttctttctgcctgtggaagtacaggtacagctcctaaaaatattcaggaagttatagcacatttggcttcacggcttgcccgatgggatgacaggtaaactcagaagttgtgcaatgaagttatagcacttatgttttctatactgtaactttatgtttaaagcatgatatgttcagattgtggcgtaaatatgtcttcggtgccgctgatgaaatagaacttaaatttgtaaacaggtaagttaatactcagagtatgttatactctgttattcgaaaaaaagtactccctccgttttacaatgtaagactttctaacattgctcatattcacatagatgttaatgaatctaaacacatacatatgtctagattcattaacatctaaatgaacgtaggcaatgctagaaagtcttacattgtgaaacggaggaagtagtacgttatactcatcttctttgaattcctttcttctgtatatataactgcattagcgttttcaggcgaaagcaagaagatttgaaactgttgtgcatgatatttaaccaagacattagaagattggccactcaggtatgtgtccagaccaaaataattgacagggacctgaaatatagtgaattccatgcattgacttgaattatgcattctatttaatttgactaggttatcagagtgaaatggtcactgcatgctagggaggagataatttttgagctgctgaagtatctaggaggcagcaccacaaaatcattacttgaagcgataaagaaagacgcaagacaaatgattgaagagcaggaggcagttcgtggccggctcttcaccatccaagatgtgatgcagagcaccctccgtgcttggtcacaggtatgagctataaaatgaccttctgaatccttgtgcattctaaatgaacatcaaatccttatatcctactactgaacagacaatatgacactatgaatctagttatttagttagtgatagctgaagtgtcatgtgtgaaaactaaaaactctgttggtgtgctactcaggagaagagccttcgcattacgcataacctgacaattttcggtgggtgtggcttggttctgtccatcatcgccggattgttcggaatcaatgttgatgggataccaggagctgagaacactccctacgctttcgcgctattctccgcgctgcttttcttggtaggactcctgctgatcatcgtggggatagtctatttcggactgcagaagccgatcagcgatgagcaggtccaggtgaggaagttagagctccaggaactggtctcgatgttccagcacgaagccgagacacacgccagggtgaaagaaggggtcttgaggactgacttgcctcccagagctgccgatctcatatgtgatgataatggtgattcacgtctccttgtttgtgactgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0601000, RefSeq:Os01g0601000