Os10g0494000

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0494000| Description = Protein of unknown function DUF789 family protein| Version = NM_001071477.1 GI:115482697 GeneID:4348991| Length = 38...")
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Gene Name

Os10g0494000

Description

Protein of unknown function DUF789 family protein

Version

NM_001071477.1 GI:115482697 GeneID:4348991

Length

3899 bp

Definition

Oryza sativa Japonica Group Os10g0494000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19211389..19215287

Sequence Coding Region

19211733..19211974,19213275..19213366,19213661..19213746,19213824..19214025,19214125..19214342
,19214906..19215022

Expression

GEO Profiles:Os10g0494000

Genome Context

<gbrowseImage1> name=NC_008403:19211389..19215287 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19211389..19215287 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgcgggcgggaggtgggtggaggagtacgggcgttcgtcgtcgccgtcgtccaacctgcagtgcttcttggactgcaccacccccgccgtcgacacgcacctcctccccaaggcgaatggccggttttcgagcgattcttggcaccacgccgagatggacagcgtcgagtacttcaacctcgcggacctatgggagcagtactatgagtggagcgcgtacggggctggaactacggtgcagctgtatggaggggaaagagtagtccaatactatgttccctacttgtcagggatacagctatataccaacaaagcccagactgcatccaggagttttggtgaagataatggcatggactattggagcgatgatgaggacaatgagaagatgtcaagatcttggagttcaacatctgaagactcattatttaactgtgatgcaataagtggcaatagaaaacgccacgggcacatgtattttgagttcttcgaggtttgctctccttatggaaggattccactcattgacaaggtgtatgaactatcccagagctatcctgggttgacatccctgagaagtgttgacctttcgcctgctagttggatgtcagttgcctggtatcccatctaccatattccctaccagcgcaatgtgaaggacttatctgcatgcttcctaacttatcataccatttcctcttcatttcaagattacgcgctcgagagcatggccaacgggaagcgaaacgacgagacggagaagaaggtcagcaagactcatcttgctccgttcgggctcgcggcgcacaagctgcagggttctctctggaccaacccgagaacaggggaccgtgacaggatggtctccctcttcggcgccgcggattcctggctcaagcagctcggagtccagcaccatgactacaactacttcatcactcaccccatgtga</cdnaseq>

Protein Sequence

<aaseq>MGAGGRWVEEYGRSSSPSSNLQCFLDCTTPAVDTHLLPKANGRF SSDSWHHAEMDSVEYFNLADLWEQYYEWSAYGAGTTVQLYGGERVVQYYVPYLSGIQL YTNKAQTASRSFGEDNGMDYWSDDEDNEKMSRSWSSTSEDSLFNCDAISGNRKRHGHM YFEFFEVCSPYGRIPLIDKVYELSQSYPGLTSLRSVDLSPASWMSVAWYPIYHIPYQR NVKDLSACFLTYHTISSSFQDYALESMANGKRNDETEKKVSKTHLAPFGLAAHKLQGS LWTNPRTGDRDRMVSLFGAADSWLKQLGVQHHDYNYFITHPM</aaseq>

Gene Sequence

<dnaseqindica>3314..3555#1922..2013#1542..1627#1263..1464#946..1163#266..382#gaaacacagaagccaaagcaaaccgaagcccagtttctctctcctcctcctcttcctcctcgcatcagtccgcataaagtctcctccccttccccctcctcctcctcctctccaatcttggcagcagcagcagcaaaggggcggtgggttctttgtctctctctctcgggcggatttcggtttcttcgtgtgtttgttggttgcgttggcgtttggagcggcggcggtggcggtgagtgtgagtggtgaggaggaggaggccgccatgggcgcgggcgggaggtgggtggaggagtacgggcgttcgtcgtcgccgtcgtccaacctgcagtgcttcttggactgcaccacccccgccgtcgacacgcacctcctccccaaggtcaccccctcctcctcctcctctctctctctctcattgatcgattgattaaagcttcgtgttctttgcgagatttttggtgtggatgtggctgacatgatctgttgcccattactcgattattctagttactgctctctgtttatttctttttatttttttttctgtcagagattgatcatgctgctgcgtgtttcctgattgcaaaatgcatccgtgaaaaggatggggggtgtgggtaatggtagattgattgattaattgatagtgcgtccatgcttgtatatagcttttccttggtacgattataaggacaattgtaccatcaagctctgtgcttgctgccgtgctgcctaattgggacgaaagtagctgcggcctgtggcgatatacggttgccatcttaaattcccggttgctattgtcaattctatttccgcatgttgatcagctgctgtatatgagtgccttttcgatctgggttagctaagctgggctaccactagctgtgcttattttgtcaacttaagactgaaagtgagatgttgctcgttttgatccaggcgaatggccggttttcgagcgattcttggcaccacgccgagatggacagcgtcgagtacttcaacctcgcggacctatgggagcagtactatgagtggagcgcgtacggggctggaactacggtgcagctgtatggaggggaaagagtagtccaatactatgttccctacttgtcagggatacagctatataccaacaaagcccagactgcatccaggtctgcacaaaagatccgttcttgtgcgtgaattttgagtctgtgccgatttctggatgcattgtgaatcggttctctctctgttttttttttctgtaggagttttggtgaagataatggcatggactattggagcgatgatgaggacaatgagaagatgtcaagatcttggagttcaacatctgaagactcattatttaactgtgatgcaataagtggcaatagaaaacgccacgggcacatgtattttgagttcttcgaggtttgctctccttatggaaggattccactcattgacaaggtaaatttttatgtcctatgtgatagtagtttagaccagctgtttctttttcctatgcttatatcgtttttctacaggtgtatgaactatcccagagctatcctgggttgacatccctgagaagtgttgacctttcgcctgctagttggatgtcagttgcctggtattgatcaagcttacctctattaatgctgtttttttggcaattagcataaaatctggcttataaacagctatagtaaatctggtgtttctgcattcatggttgttctaatcgccttgttgcttggtttggtagttgattgaagcatttctgttaattttggcactttataattcttttgtttctaaatagtagctgatgtctccaggagcttgaatccattattggttgttaattctgttcccagagacaattacgctaaacattatcattaacttatattgctatatttaggtatcccatctaccatattccctaccagcgcaatgtgaaggacttatctgcatgcttcctaacttatcataccatttcctcttcatttcaaggtatgctatttgttgcattagggacattaacaagtactagtttgattgaatcttgtgatagagtcgaaaaatatatatattctagggtactattctattactggatgaaaataatggatatgatattgcccctttgtgtgcttacagtgttgccataggcaggcatatcaattcaaaaatattatagcttactatatgttttttctttgttacatctcatgatgatatacattacacaagaataatcagttcctgtggggaaaaaaacctcaggatcagtatatgtttaaactatgcttaaatggcaacatgctatcccaggactaagacactcaaaactgtagcagtgtagctttcgcagtagtgttgcttgggactgtttgatcaagtggtctttaatgttcagaaaatgaactatatatatagaaaatagttgctttgcttgagactggtcagatgagtggtctttagtgttcagactgtggacttatgtagctagaaaacagtcgccttgcttgcgactgatcgattgattggtctttacagttcagagttcagaccaagcacattgatgcttttatcctcttcattttagatgctaaatttagaaaatatatttactcttattattttgtgttaatgtcaagatatgttttttactgcacattagcatgctatgttagcttaaaacacaggcttagcttgcaagagtttgtaagttttcttcaagggattgtacagctttctattttgcatccaagcttccaacttcagcttcaaaaggtctcatgccttagcttttaagtgcatatataaggatgtcacttaaaaaagaggataagtggcagaagtttggttgcccgataaagcggaggaaggagactgtcttgccacatgccatgacttttagtgcttagtcttaggcatgcagctgtttcttaaaaactagaaatatctatgttctaccacagtggtaggagctctttgtatacttatataaaatattggtgcaaggttgcttggattgcaatgagtgcaacagcacttaggcaccccagctgtccatttcaaatatataaaaaatcagtgggtaatggtacttgagtctaaactgagccatcccagtgtgcttgatagtgatatgcatattaagaagaaaaatattatgcactgttttcctttattaaacttcaccgatgatcaccttagttctgtttttgaactgcaacgcgttgcggtaatgatgttcttggcactaattttgaaccgtgctgacctgtattttccgcctcatccacagattacgcgctcgagagcatggccaacgggaagcgaaacgacgagacggagaagaaggtcagcaagactcatcttgctccgttcgggctcgcggcgcacaagctgcagggttctctctggaccaacccgagaacaggggaccgtgacaggatggtctccctcttcggcgccgcggattcctggctcaagcagctcggagtccagcaccatgactacaactacttcatcactcaccccatgtgatctgaacagctgatctgtgtcatctgagaagagtaggttgcaacttgcaaagaaaccccatggctgcagactttggagaggaggcatcagatttttacttaccccagcgacaatggtagcaaacgttttaccgttttgtcaaaatgacactgacatttgccggatagagttttataccgcttgagacttgagacttgagagtttacctgcagctgaatatataccgaatatatcaggacttataggttttgtgtttttcttggctgaagatgtaaaccgaccgtgtacagaaagttttggaactattttgatatccaatatatgtcgtggttggaattggattc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0494000, RefSeq:Os10g0494000