Os01g0603000

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0603000| Description = Similar to Nuclear RNA binding protein A| Version = NM_001050037.1 GI:115438285 GeneID:4324091| Length = 4096 bp| D...")
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Gene Name

Os01g0603000

Description

Similar to Nuclear RNA binding protein A

Version

NM_001050037.1 GI:115438285 GeneID:4324091

Length

4096 bp

Definition

Oryza sativa Japonica Group Os01g0603000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25397725..25401820

Sequence Coding Region

25397913..25398113,25398195..25398251,25398332..25398490,25400212..25400356,25400460..25400871
,25401428..25401590

Expression

GEO Profiles:Os01g0603000

Genome Context

<gbrowseImage1> name=NC_008394:25397725..25401820 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25397725..25401820 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacgaagaaccagttcgacctgctcgtcgacgtcgacaacgacgacccctcgcacctcatcgccgccgccgagaagaaggcggcggcggcggccgcgtcgcccaagccggccgcccaggcaaagctgcccaccaagccgccgccgcccgcgcaggctgtaaaggagtccaggaactatggtgctccagcccgtgagggggcaggccgcaatggaccagggcgtggcagtggtggttttggtggaggcaggataggccaaaggcgtgattttggtgagggtgataccaacggtgtagagggagggtatggcgctagcggctttggggatggaattgtgaggagggaagaaggtgaacacagaccttcagagaggggccatggaccacgccagccttaccgtggcggaggccgacgtggcggttacactggtggggaggctggggatgagtctggtcgtgctcctcaccgtgcctatgaacgtcgtagtggcacaggtcgagggtatgggatgaaacgtgaaggcgcaggccgtggtaactggggaactgtgactgatgaagcccttgcccaggaatctggtgaggctgtcagtattgaagtgtctgttaccgtgactgaggaaaacaagcaggaagatgtaccacaatctgatgaagtcgagaaacacaaggagggtgaatcaaatgaagaggaagaaaaggaacctgaagacaaggagatgactttggaggaatatgagaaagtactggaggagaagaggaaagctttgctttcactgaaggttgaagagagaaaggttgtggtggacaaggaattgcagtcaatgcaacagctctcagtgaagaaggattctgatgaagtgttcatcaagctgggttctgacaaggacaaaaagaaagaaaatgttgaaagagatgaacgcaccaggaagtctcttagcatcaatgaattcctgaagccggctgaaggtgaaagatactacagcccaggtgggcgggggcggggacgtggcagaggacgtggtgaccgtggaggattccgggatggctatagctctcgaggtcctgttgccgcaccaagaattgaagatcaagcgcagtttcccggcttggctgggagattggtgcactag</cdnaseq>

Protein Sequence

<aaseq>MGTKNQFDLLVDVDNDDPSHLIAAAEKKAAAAAASPKPAAQAKL PTKPPPPAQAVKESRNYGAPAREGAGRNGPGRGSGGFGGGRIGQRRDFGEGDTNGVEG GYGASGFGDGIVRREEGEHRPSERGHGPRQPYRGGGRRGGYTGGEAGDESGRAPHRAY ERRSGTGRGYGMKREGAGRGNWGTVTDEALAQESGEAVSIEVSVTVTEENKQEDVPQS DEVEKHKEGESNEEEEKEPEDKEMTLEEYEKVLEEKRKALLSLKVEERKVVVDKELQS MQQLSVKKDSDEVFIKLGSDKDKKKENVERDERTRKSLSINEFLKPAEGERYYSPGGR GRGRGRGRGDRGGFRDGYSSRGPVAAPRIEDQAQFPGLAGRLVH</aaseq>

Gene Sequence

<dnaseqindica>3708..3908#3570..3626#3331..3489#1465..1609#950..1361#231..393#gagggggtgagctccaggtggcggctagggttagggttttagggtgaactcaccgcgccaccacccctcccgcatcttccacctccgcctctaaaccccgcacgcccgcaacccatcgtgcctgattcgtccatccgccattgatggcggtcttgtcaccggcggcgttgtcctaagtggtttgggtgttgtgcaagagggtggtttcgttgcggggggaggaggatccgatggggacgaagaaccagttcgacctgctcgtcgacgtcgacaacgacgacccctcgcacctcatcgccgccgccgagaagaaggcggcggcggcggccgcgtcgcccaagccggccgcccaggcaaagctgcccaccaagccgccgccgcccgcgcaggctggtgagttcacacgggctggctcggattggatcgggtgtcggggattttagcgtccgcgccttgtgctggggattggggaagctaaaatttacttcgttttaatcgaaatgctcttgatttatttgggatgctctgtccagatgtgccaatctgttgcagggtaataatagtatgacgttatgtcaatgtacctatgtggttgcagtagcctggaatttttcattttgtataagtcacttttactttttttcctagtcaattttttctagtttgactaagtttatatagacatatagcaacatttttaacacaaaacaagcatactatcaaaatatattctatattacatttaatgaaactaatttggtgttgtagaaatttaataaatttaaagaaatttaactaggaaaaaagtcaaagtgacttacaatatgaaacggagggagtattatcgtttaaagttttgttttttaatatctcttaataccccttaactgcaatgtattcaccgcacatggggataatttagttacatagtgttaatttgtcaatgcagtaaaggagtccaggaactatggtgctccagcccgtgagggggcaggccgcaatggaccagggcgtggcagtggtggttttggtggaggcaggataggccaaaggcgtgattttggtgagggtgataccaacggtgtagagggagggtatggcgctagcggctttggggatggaattgtgaggagggaagaaggtgaacacagaccttcagagaggggccatggaccacgccagccttaccgtggcggaggccgacgtggcggttacactggtggggaggctggggatgagtctggtcgtgctcctcaccgtgcctatgaacgtcgtagtggcacaggtcgagggtatgggatgaaacgtgaaggcgcaggccgtggtaactggggaactgtgactgatgaagcccttgcccagttaatgctgatatctgaaacttcatattctttggaagtgctatttcatgtttaatgggtttgtttaagtttaatgtttctttttggttttgtgatttgttagggaatctggtgaggctgtcagtattgaagtgtctgttaccgtgactgaggaaaacaagcaggaagatgtaccacaatctgatgaagtcgagaaacacaaggagggtgaatcaaatgaagaggaagaaaaggaacctgaagacaaggtataattccagttttgtgttgtaccattatattctagtactagattggagatgcagagaacaaactagctcgataatgcattgaagaattaacatttacatgcaaactacatgtcttgaccaatatttgctaatttaacacactctttttctatctaaactttttatagcaagtcaatttctcacatgcccatcttcaagtggatttcctaatgcagaaaattcatggagacaaaatgatgattattctaattgtgtgattcctttgatattttatttataaatgagtcatataatggaaatggttatattttacaattcagttgtgaagttcacgttgaaaacttaatggcagtgttctagctcatctagctgttattctatatttgtacctgtgcttttacatgcacatgggaataaacaattacagtttgtgatgcttggatttattttccccacaatttcacttaatctatgacctgttaccagtattaaataattcatgcgatttgcatcctcccttatttctatgaattgttattacacttgtcaattaagcagaagtcagatccatttctgaggcaccactagaagaactgaagcttaagtacattcctgcccaggcatataaataattaagtatggcaatttgtgtttatcgccagttaataagatgttgtctagttaatttgagcgaaaaactgcaagcatttggatgctcgcaatttcatctttcttttttctcaatgatattttttagtttaactagtaaaaaaacatgcttgatgtctttgtcctccttgtatttagcattcctcggctatgcctttctatttccttacctagctgatcaagctaaatgagtcctacacaggataatatgtatgctggtagagaacatgtctgctgtccttattcattaaattcagcaatccctagctggctggccgtgcctgtctttcttgatccaaccaattgttgtggctgatctggtccagtgaatctttcacaccaagagaacaggtagtcgttgcaagttctcaatttcacccagcctataggtacactggtggagaacatgcctgctgtccttattcattatattcagcagtccctagccatgcatgcatgtctttcttggtgcacccttggctgatctgatccagtgagtcttgcacaccagaacaggtggttcattgcaaattctcaatttcacccagcctatagatagcttgtgtggaagcatcaaggttttcatgcattactttagcatgcatggattcaggaggctgccatacataatagctatctgttgaaaaaaaaacacttgctgtgcatccattgaaattatgttggttcatagaatgggcttgttcaaagctgaaaatgtatgtgcttaggaggttgtattgattggttgggcttggttagatttttttttttgtttccttttgtttgccatgggtttatgtgtccatataatttggggttatgattccatctacattttttctgcacaccttcattttcatttgttttagcatgcatatatgctctcaagtcaattagttttgattgtcgtcaatgtacacgctcaatttcttctttgatgttctgttctgcacttaccattacaatacaaaaggcagatgctcaatgccttatagtatgttgccaccggtccttattaaattattctttttccctattcgggtacacaggagatgactttggaggaatatgagaaagtactggaggagaagaggaaagctttgctttcactgaaggttgaagagagaaaggttgtggtggacaaggaattgcagtcaatgcaacagctctcagtgaagaaggattctgatgaagtgttcatcaagctggtaggttcatgcagcacttttactcaattccgtgagcataactagccccgctgctcaccttccactttgttttaatgcagggttctgacaaggacaaaaagaaagaaaatgttgaaagagatgaacgcaccaggaaggtttgtagaattctcccaaatttcagtccaatctgctcttacgttgctccaatctcaagccattatcttattttccgccagtctcttagcatcaatgaattcctgaagccggctgaaggtgaaagatactacagcccaggtgggcgggggcggggacgtggcagaggacgtggtgaccgtggaggattccgggatggctatagctctcgaggtcctgttgccgcaccaagaattgaagatcaagcgcagtttcccggcttggctgggagattggtgcactagctgccatgatatgatctccttgcactttttgtgggattttaaaaatgtgtctgcacgcgttgcttgctgcatcagtgttgtactgtcaagctacgcatatgccactgttgtgtctcatgtatacccgtgcggccgagccaaatgtttgaaaggtaattttcaaaaaatctcattggaggttttccgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0603000, RefSeq:Os01g0603000