Os01g0603100

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Revision as of 04:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0603100| Description = Disease resistance protein family protein| Version = NM_001050038.1 GI:115438289 GeneID:4324092| Length = 4874 bp| ...")
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Gene Name

Os01g0603100

Description

Disease resistance protein family protein

Version

NM_001050038.1 GI:115438289 GeneID:4324092

Length

4874 bp

Definition

Oryza sativa Japonica Group Os01g0603100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25403686..25408559

Sequence Coding Region

25403706..25404529,25406440..25407265

Expression

GEO Profiles:Os01g0603100

Genome Context

<gbrowseImage1> name=NC_008394:25403686..25408559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25403686..25408559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcctgctcctcaagaaggtctgcgagctgctcatggctgagctcaacctggacaagaagttgacgaagagcatcggagatctccggacggagctgaccatgatgcacggcgtcgtgcgctggatcggcgaggtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggcaggtccgcgagatctcctacgacatggaggacgccgtcgacgcctacctggtgcgcgtcgccgacggcgagccggaggcagccaagcagaaccggcggctcagcgagtccctgaagagagccgcccggttgttcaccaagggcagggctctccatcagatcgccggcgccgtggaagaagcccagggccgcggcaagtcgctgtccgacctgcgtcagaagtacggcggcctcaagctgcacggcgccggcgaggggtgcgccgccattgaccctcggctcacagctctgtacgtcgaggtggccaagctcgtcagcgtcgacaaggccagggacgagctgagcgagctgctgctgtcttcttcaggtggctcgatgcagcagcagcagcagctgaggacggtctcggtctttggatttggcgggctggggaagacgactcttgccagagcggtttatgagagcatcagggagcaatttgattgcgctgcttttgtttccgtgtccaggaatcccaacatcaccaagattttcaggaaattgctgtttgaacttgaccgggaacagtactcagacatcaatgatttagacagagatgatgtacagctaattgatgagctgagaagttttctccagagtagaaggtacctcattgtaattgatgacctctgggatgaaaatgtgtggaaattcatcaagtgtgttttatatgagaacaatctcagcagtcgaataatcacaacaacacgcaaaatcaatgtctctaaagcttgttgctcttcgggtgatgacaagatttatgaaatgaaacgtctttcggatgatgattccaagaagctcttatacacaaggatatttacccatgagaacaactgtcctcatgaattgaaacaagtatctacagacattttgaagaaatgtgacggggtaccattagcaatcatcactatagctagtctgttggccggtaataataataggcccataaaaactaaggatcaatggcacaatttgctcaattctattggccggggactcacagtaggtgaaggtgtggatgatatgcagaagatattatcatttagctactatgatttacctcctcatctgaagacatgtttactgtatctaagtatatttccagaagattatgaaattgagagagatcggttaatatggaggtggatagctgaagattttgtccaatgtgaaaataattgggacaacttatttgaggtcggagagagttacttcaatgagcttataaacagaagcatggttgagccagtcggcatcgactttgaaggcagagctcaagcttgtcgcgtgcatgatatgatgcttgattttatcctttccctatcaaaagaagaaaattttattactataatagatgacagtgagcacagaacatcttggcaacataagaatgataataagattcgcaggttagccatccaaaacacttga</cdnaseq>

Protein Sequence

<aaseq>MSLLLKKVCELLMAELNLDKKLTKSIGDLRTELTMMHGVVRWIG EVPPEQLDGQVRLWARQVREISYDMEDAVDAYLVRVADGEPEAAKQNRRLSESLKRAA RLFTKGRALHQIAGAVEEAQGRGKSLSDLRQKYGGLKLHGAGEGCAAIDPRLTALYVE VAKLVSVDKARDELSELLLSSSGGSMQQQQQLRTVSVFGFGGLGKTTLARAVYESIRE QFDCAAFVSVSRNPNITKIFRKLLFELDREQYSDINDLDRDDVQLIDELRSFLQSRRY LIVIDDLWDENVWKFIKCVLYENNLSSRIITTTRKINVSKACCSSGDDKIYEMKRLSD DDSKKLLYTRIFTHENNCPHELKQVSTDILKKCDGVPLAIITIASLLAGNNNRPIKTK DQWHNLLNSIGRGLTVGEGVDDMQKILSFSYYDLPPHLKTCLLYLSIFPEDYEIERDR LIWRWIAEDFVQCENNWDNLFEVGESYFNELINRSMVEPVGIDFEGRAQACRVHDMML DFILSLSKEENFITIIDDSEHRTSWQHKNDNKIRRLAIQNT</aaseq>

Gene Sequence

<dnaseqindica>21..844#2755..3580#tggagctgacggcgggggcgatgagcctgctcctcaagaaggtctgcgagctgctcatggctgagctcaacctggacaagaagttgacgaagagcatcggagatctccggacggagctgaccatgatgcacggcgtcgtgcgctggatcggcgaggtgccaccggagcaactcgacgggcaggtgaggctgtgggcgcggcaggtccgcgagatctcctacgacatggaggacgccgtcgacgcctacctggtgcgcgtcgccgacggcgagccggaggcagccaagcagaaccggcggctcagcgagtccctgaagagagccgcccggttgttcaccaagggcagggctctccatcagatcgccggcgccgtggaagaagcccagggccgcggcaagtcgctgtccgacctgcgtcagaagtacggcggcctcaagctgcacggcgccggcgaggggtgcgccgccattgaccctcggctcacagctctgtacgtcgaggtggccaagctcgtcagcgtcgacaaggccagggacgagctgagcgagctgctgctgtcttcttcaggtggctcgatgcagcagcagcagcagctgaggacggtctcggtctttggatttggcgggctggggaagacgactcttgccagagcggtttatgagagcatcagggagcaatttgattgcgctgcttttgtttccgtgtccaggaatcccaacatcaccaagattttcaggaaattgctgtttgaacttgaccgggaacagtactcagacatcaatgatttagacagagatgatgtacagctaattgatgagctgagaagttttctccagagtagaaggtacacactgctgagctttgaggtcgattttcttcagtattaaaagttactccatccgtttcataatgtaaaactttttagcattgcccacattcatataaatattaatgaatgaatgctagaaattcttacattatgaaacggaggaattacacattagtgttacattaccattggtggacttcttgttgagaataagtgttacgccttattctcaggtttccttcagaagttcagagacgagttccttcagtaaaataggaaacagagtcactgttacacatttcaccctaatatactaggcaatccttttctctcttttttttccccagaaaacagaaatgctatacatttcactgatttctgcaattaatgctagctcttacaaaatgatataggtatctcattataattgatgacatttgggatgaaaaattgtggggatttatcaatactagcacattagtacttaatcagtgattgacctgtttgttcagagcaagggaataagtgataagcatttcttattgggggaaatagtgcgagagtattatgaactgtttggtacagcttcaattccacttctcctgaagttagagcccaaccatatagtttcagttccacctaaaataagagtggagctggatgaaccgctctcgcaaaatgaactagagagttgagacagtttaggctgctccacaacttcacttcagacccaactcatgaagttaaatttaggagttggagctctaccaaacgggccatatattgttttcttctgatatgttctttgtttccattgtctctctaacatatgatgaaatagagtaattgctacacaattaagtatttaacatctcttgtatcgtctcttactataaaattatagcccattaattcttacagcttaacatgcaaatatgatgcattatcatccaataacaattattacatttaaacatcatgcaagcatgctatattatctataattgaataatcatcccaaataattcacataatatttcaatatatctctccattattttttaaatattcatataggtatatatctatatagttcattctcacttagttcatgttgtttttgttttctctcattaagtcatatcacatcaattgtttttagtccttagatgattaatctaggcaaaatggttcaaattatcttgctacttttcttctctcattaagtcatattatctcaattttttagcccttagatgtatggtctaagttatcttcttttttttttctcataaaatcacatcattttactttacatttgaacatcattctacatatcattttaatttaaatcatatcaacttatgaaaacttatgtttatgtaatatttatgtaagcttatgttggttaagctatcttacacattatttcgacttattgttatcatagtaaattcctgcaataacgtgtgggtttcacctagttattaatgtaggagtgctgacaatcattttgctttctttcataaaacagttacagccttgtttatttcgtgaaaaaaaaatttgggtgtcacatcggatgtttgattggatgttggaaggtgttttcggacacgaaagaaaaaactaatttcataactcgcccagaaaccgcaagacggatcttttgggcctaattaagccgtcattagcacatgtggggtactgtagcacttatggctaatcatgaactaattaggctcaaaagattcgtctcgcgatttccgtgcaaactgtgcaattagttttgtttttatctatatttaatgtttcatgcatgtgtccaaagattcgatgtgacatttttgggaaaaaaattttgggaactaaaccaggcctacatttcactgatttacccaattaatgccttgttacaaatgtaggtacctcattgtaattgatgacctctgggatgaaaatgtgtggaaattcatcaagtgtgttttatatgagaacaatctcagcagtcgaataatcacaacaacacgcaaaatcaatgtctctaaagcttgttgctcttcgggtgatgacaagatttatgaaatgaaacgtctttcggatgatgattccaagaagctcttatacacaaggatatttacccatgagaacaactgtcctcatgaattgaaacaagtatctacagacattttgaagaaatgtgacggggtaccattagcaatcatcactatagctagtctgttggccggtaataataataggcccataaaaactaaggatcaatggcacaatttgctcaattctattggccggggactcacagtaggtgaaggtgtggatgatatgcagaagatattatcatttagctactatgatttacctcctcatctgaagacatgtttactgtatctaagtatatttccagaagattatgaaattgagagagatcggttaatatggaggtggatagctgaagattttgtccaatgtgaaaataattgggacaacttatttgaggtcggagagagttacttcaatgagcttataaacagaagcatggttgagccagtcggcatcgactttgaaggcagagctcaagcttgtcgcgtgcatgatatgatgcttgattttatcctttccctatcaaaagaagaaaattttattactataatagatgacagtgagcacagaacatcttggcaacataagaatgataataagattcgcaggttagccatccaaaacacttgaagaatggcagaagaggctacagcaagcagcatgtcacaagtgagatccttcactttgttcagacctggtgttaattcgatgccatccctgtcactgtttcaggttcttcgtgtactggatttagaaggctgtgatctcagtaaatttagcaatcttaatctgaggcatgtcggtaagctctctcacctgaggtaccttgggctaagacgaacatacatcgctgagctccctacagagatcggaaatctgaaggttttgcagacgctggacatcagaggagctcatggcatacgggagttgccgcccgcgatcaccgggctgaggcaattgatgtgccttcgcctcgattgggacaccaggctaccaagaaatggtgggctcgcaaccctgacgtcgctggaggagatgaccgggctcagagttcgccgtgattctgcagacggcgtcgtcagagagcttcgctgtctgaagaagctcagggtgctccggctccagtggggagagatggagcacggcgcgggcagagctgtggtgggggctctcggcgagctgcaggggatccagagcatcgagatttacgcttacggcggtggcggcggcggcgtcggtaacgtcggcgacggctgggtgcctccggcgtgcctccgccggttcgtgtcgaacgggcccacgagcgcgttctcggcgctgccggcgtgggtgcgctgctcgcctctgccgcgcctcgccttcctcgacgtgtgggtggatcgggtgaggcggggcgacatcggcgtcgtcggggagctgccggccctccagtctctccggctgcgggccaccggccggatagacgcgcgcccggcggtggagcggttcgcggtgcgcgccggcgcgttcccctgcgcggcggcgtgcgcgctcctgcacttcgtgacggcgccgtccatgttcccgcgaggcgccatgccgagggttcggcggctctcgttcagcctcagggcatgggacttcgccgccgccggcgatggcggcggtggtggtgggcttaggcttgggctgcgcgatctgggcatgcagaacctcccttcgctcgaggacgttcgcgtcgaggtttggtacaagaacacgggagatggcggtggttcggcggtgacgaggaaggtggaggaggcactgcgacgcgtggcggccgtccatcccaaccgtccggccatcaacatccgcaggaggaagatgacgactggatcggcccaatccgattcttccactttgtctatctaaatccagtcaataataatcggcatgttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0603100, RefSeq:Os01g0603100