Os10g0494100

From RiceWiki
Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0494100| Description = Conserved hypothetical protein| Version = NM_001189291.1 GI:297727712 GeneID:9269836| Length = 3056 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0494100

Description

Conserved hypothetical protein

Version

NM_001189291.1 GI:297727712 GeneID:9269836

Length

3056 bp

Definition

Oryza sativa Japonica Group Os10g0494100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19226822..19229877

Sequence Coding Region

19226822..19226925,19227912..19228902,19229089..19229877

Expression

GEO Profiles:Os10g0494100

Genome Context

<gbrowseImage1> name=NC_008403:19226822..19229877 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19226822..19229877 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgctccaatggcagcagcccgagcacaatagcgagatccatctacgacgacgagggggctactccgacgatcatcctggaggttggggatggtgaggggaaggatcgcatgcccttcatcattagcaaggaccttcccgagttgacgcctatcatgtgtttgacaaaatgctcaagcctcgacgtcgagcctgatttcaccgtggctgcggtggttacatgttccaacactgccgtggactccaaagagttggtagccaccgatggcgcaaccggcaccaccatcattgacccccgtgtttgttccaaggagacgcacaccaagtgtttgttgttcggccccgatgtcaacggtgtcactgatagaggtgtgattgcgttccaaagtaggatgggtgtgttcaaggtcgttccgatatcaagtcagtccatggagttgatggttgacgagaaagcaacttgcactgacaccactcaccttcccaaggtgatgcacccaagccatttgatgttgggccccaacgtcaacaccggtactgtccaggctggggttgcgtactcactattgcttggcgcgccagaaggaatagcatcctcgggaaaggccacactagtcatggcacaaaagctaaactccaatttctgcctaaaatgggtggcgctcaacaggtgttcgaccaaatgctccaagggctacaagaagctgttgatgagtcatcccaagagaaacccatggccacctccttgctcaggtggagtggttagaagatggaaggagtggtatcaagtcccatggcctgcaccagtttttgcacatttgatgggatatgatttttgcagtgcaaattgcataagagaccaaacaccttctgttgcactatattgtgcacctaaaggagatttaaatcatgaaaaatctaatcgagctcataaggatacattggtggcaatatttaacttggaacagttccattatgtgggtggtgaggaaaaagttacagagggaatgttatatggcctaagtacaataagctgcaactacttgatcattcctgctgctacaatgacaacaacatttctgtcagttccatcttctactcaaaatatatatggagcttgttggttggaggctcaagaagggttaaatgatatagctaagggaagaacttacaaaatttgtaagtccatgcgcatgacacttaatcatgttgagagctggctacagaacccaacaaacatattatacaatggtcagttgtttaactgtccagcggggatacattttggggtcagaaggatttctgggattattgctagaggtgctgctgagaatcagaacaggaaggtcaagacatgtggttatgattccatttttgatttctgtgagaacaatcctagtgatggtagtgctgcagcaaggttttccattgatatcgggacagattcagagatgatatatgcatcaattgcaaacagggattattggtctgttaaattattggtggtcataaaagaggggtgcccaatacgccacttgttactaggtgatatcaagaaagaacaattgctgcaatgtgagacattcagtacaagacagacaaatacagagcaagttatcaagctacaggtgagcaattccaaggaaatacaagagctacaggtaccatgggatccaggaggttttcttcatcggcttggggacaagccaaatttcaagaagaggggattgtcagggactcgggtgggctgcacatgggccgctggctacaccacggtggcgagattatcagacaatggcgagctccgtcaccatttttcccacaaggaggaaaaagatgaagagataaagaagaagacgaaaaaggaaggagatggatga</cdnaseq>

Protein Sequence

<aaseq>MECSNGSSPSTIARSIYDDEGATPTIILEVGDGEGKDRMPFIIS KDLPELTPIMCLTKCSSLDVEPDFTVAAVVTCSNTAVDSKELVATDGATGTTIIDPRV CSKETHTKCLLFGPDVNGVTDRGVIAFQSRMGVFKVVPISSQSMELMVDEKATCTDTT HLPKVMHPSHLMLGPNVNTGTVQAGVAYSLLLGAPEGIASSGKATLVMAQKLNSNFCL KWVALNRCSTKCSKGYKKLLMSHPKRNPWPPPCSGGVVRRWKEWYQVPWPAPVFAHLM GYDFCSANCIRDQTPSVALYCAPKGDLNHEKSNRAHKDTLVAIFNLEQFHYVGGEEKV TEGMLYGLSTISCNYLIIPAATMTTTFLSVPSSTQNIYGACWLEAQEGLNDIAKGRTY KICKSMRMTLNHVESWLQNPTNILYNGQLFNCPAGIHFGVRRISGIIARGAAENQNRK VKTCGYDSIFDFCENNPSDGSAAARFSIDIGTDSEMIYASIANRDYWSVKLLVVIKEG CPIRHLLLGDIKKEQLLQCETFSTRQTNTEQVIKLQVSNSKEIQELQVPWDPGGFLHR LGDKPNFKKRGLSGTRVGCTWAAGYTTVARLSDNGELRHHFSHKEEKDEEIKKKTKKE GDG</aaseq>

Gene Sequence

<dnaseqindica>2953..3056#976..1966#1..789#atggagtgctccaatggcagcagcccgagcacaatagcgagatccatctacgacgacgagggggctactccgacgatcatcctggaggttggggatggtgaggggaaggatcgcatgcccttcatcattagcaaggaccttcccgagttgacgcctatcatgtgtttgacaaaatgctcaagcctcgacgtcgagcctgatttcaccgtggctgcggtggttacatgttccaacactgccgtggactccaaagagttggtagccaccgatggcgcaaccggcaccaccatcattgacccccgtgtttgttccaaggagacgcacaccaagtgtttgttgttcggccccgatgtcaacggtgtcactgatagaggtgtgattgcgttccaaagtaggatgggtgtgttcaaggtcgttccgatatcaagtcagtccatggagttgatggttgacgagaaagcaacttgcactgacaccactcaccttcccaaggtgatgcacccaagccatttgatgttgggccccaacgtcaacaccggtactgtccaggctggggttgcgtactcactattgcttggcgcgccagaaggaatagcatcctcgggaaaggccacactagtcatggcacaaaagctaaactccaatttctgcctaaaatgggtggcgctcaacaggtgttcgaccaaatgctccaagggctacaagaagctgttgatgagtcatcccaagagaaacccatggccacctccttgctcaggtggagtggttagaagatggaaggagtggtatgtgccctgggctgcgggcaattatttggggataatattttatttcatgccaccatggccaccaccaaatcaaattggaaccataatactttggctgttggtaaacacatggttgacggaagtagagctgaaaccgtggcctgacccacaaccaagtcaatataacggaggcgtgatgtggggtgagcaagtcccatggcctgcaccagtttttgcacatttgatgggatatgatttttgcagtgcaaattgcataagagaccaaacaccttctgttgcactatattgtgcacctaaaggagatttaaatcatgaaaaatctaatcgagctcataaggatacattggtggcaatatttaacttggaacagttccattatgtgggtggtgaggaaaaagttacagagggaatgttatatggcctaagtacaataagctgcaactacttgatcattcctgctgctacaatgacaacaacatttctgtcagttccatcttctactcaaaatatatatggagcttgttggttggaggctcaagaagggttaaatgatatagctaagggaagaacttacaaaatttgtaagtccatgcgcatgacacttaatcatgttgagagctggctacagaacccaacaaacatattatacaatggtcagttgtttaactgtccagcggggatacattttggggtcagaaggatttctgggattattgctagaggtgctgctgagaatcagaacaggaaggtcaagacatgtggttatgattccatttttgatttctgtgagaacaatcctagtgatggtagtgctgcagcaaggttttccattgatatcgggacagattcagagatgatatatgcatcaattgcaaacagggattattggtctgttaaattattggtggtcataaaagaggggtgcccaatacgccacttgttactaggtgatatcaagaaagaacaattgctgcaatgtgagacattcagtacaagacagacaaatacagagcaagttatcaagctacaggtgagcaattccaaggaaatacaagagctacaggtaccatgggatccaggaggttttcttcatcggcttggggacaagccaaatttcaagaagaggggattgtcagggactcgggtgggctgcacatgggccgctggctacaccacgggttggtcagcccattgccaagaagcccaagcaagcccaagctgaaaaatatatgagcagcagcagcttacaggagatcgatcgaacagattcatttgaccaaggcggcgaatagcggcggcggcgacctagaggctggctggtctctttgtcgatctctcctctatctcccttcttctctactagtctagaagctactagaaccttctagcccttgtatccttccatcttccacctcaaaaccactccactattgtaacagacttggttgttccctgtgttggatttggcactgctatttctgaaattatattgttgagtgggtctctaacatcccatcgcgccgtcggcgaggcgagggtggctggcggcgccggcgggcacggcgcacgggaagctgccgccggcgaagcgaggagaggagtgaagcgtcggaggagacgcagttcttcaccgtccgatcgatcaaaaccgacggcctagatcgagccagtgactttcccttttctatctaccccattgtaaattggatcccattgtaaatgtgattattcaaatagatgtcataataattcgtttatatttgtagtcgtgccactgaaattttataaaatcaaaactgtgctagtgacgccacattttccacccatatcctttattttccattttctacattctctctcgtcttcttccctcacctctcctctttgcttggtgcagcgagatgctcgtcctcatcctcttcctcctctatctacccccggcaagcccgcaccaccctagagtgtaccacctcctccgtggccccaggtggcgacgatgatggcaagctcgttgtggcggtgatgaggtctcagacggcggagtgctccatcgtcaatttgttttcctccttgtgatttttctggcgacaacaatctcgtcctgtctaggagacggaggtgtgctccatcgccatatttgtcctcctgttttttctgatggcagtggcgagattatcagacaatggcgagctccgtcaccatttttcccacaaggaggaaaaagatgaagagataaagaagaagacgaaaaaggaaggagatggatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0494100, RefSeq:Os10g0494100