Os01g0605300

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0605300| Description = Similar to Likely ubiquitin-conjugating enzyme e2| Version = NM_001050053.1 GI:115438349 GeneID:4324209| Length = 34...")
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Gene Name

Os01g0605300

Description

Similar to Likely ubiquitin-conjugating enzyme e2

Version

NM_001050053.1 GI:115438349 GeneID:4324209

Length

3462 bp

Definition

Oryza sativa Japonica Group Os01g0605300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25500120..25503581

Sequence Coding Region

25501162..25501297,25501434..25501503,25501581..25501686,25501821..25501919,25502055..25502177
,25502290..25503426

Expression

GEO Profiles:Os01g0605300

Genome Context

<gbrowseImage1> name=NC_008394:25500120..25503581 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25500120..25503581 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaggctgcaagactgaatctgcgaatgcagaaagaggttaagcttcttctaaatgatccacctcatggggtctcccttaatctttctggggatgaaagtgccttgtcatcgttgttgagtttcgaggccagaatacagggacctgatgaaactgtttattcaaaaggagtttttgttctgaagatccaaattcctgaaagatatccttttcaacctcccaatgtgacatttgttactcctatttatcatcccaacatagacaatggaggacgaatttgccttgatatactaaatttaccaccaaagggtgcctggcaaccatcgctcaacattgctactgttttgacaagcattggtttgctgctaagtgacccaaaccctgacgatgggctgatggctgaaataagtcgagagtacaaatacaacagacaagtttttgacataaatgctcggtcctggactgaaaagtatgctaatccttcagcaattggcgctagtggttggagctctgtagatgtttcaaccctggcaccaaacatacaagaggagaagctaagcctggagcctttgccaaaagcttcaaataaaaattgtgatgggagtagaaagaagatgaggctacttagtcaaaagttatctctgaaatcagtacctgaagagaataccaccactggcaaaaaggacctggtgacaaaccacttatcatcgacagcaagacccactgatcctactgcatgcttgtctgatgtttcaggcaaactgaatgatacctcagaaagcatatctgtcatcgcagatagtgcagtgacttcaaagaaagaataccaaggaactagaaggaacttgcagttacttgggcaggggcttcctgttacatcagaaggtcctagcaagaacagtaatggcagtgtggaagataagttacctaatcatcttctagcatcagcatcatcgaacactaagcatcctgtcatgggatcttctgataatgctttagagaagagtagtgcaaagcgcattggtgagtcattagatagcttgtataaagcatcagaaggcgatggtacaaatgtgaggtcacttggtcagaagttgtcactgaaatcggcaaagcctgaaagcaagagcaatgttcagaaggaaaacatggctccaaatcatctgccttcattgtcaggcttcagtaatctggataaaagacaatcgcatgttatttcagggggaaattccattgggcatactaatctggttcaacaaaattctaacaacgaaaatgtacttccaagtacccagttgataccaagtaaagaatgcaatcaaggccgaaagaagctgcatttactaagtaagaggctgtcattgaaatctgagctgcctgcagacaagaccattgagaaggaatatatgcaaacagattgttctcaaaacaacaggaagcccaatgaacttccgttgtcagcgcctgtcctcaaaaatcagatcttgggtaccattgatccacagaaagatgccaggcaaagcaagtcttccatccaacaaaacacaactcctgtggagaggattgttgtttcagatagtgaagatagtgctgatgaatgtgaaagaccttcaagatcaaggctctcattgatgaggagacgattggctggaaaaccaagaagctaa</cdnaseq>

Protein Sequence

<aaseq>MAQAARLNLRMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFE ARIQGPDETVYSKGVFVLKIQIPERYPFQPPNVTFVTPIYHPNIDNGGRICLDILNLP PKGAWQPSLNIATVLTSIGLLLSDPNPDDGLMAEISREYKYNRQVFDINARSWTEKYA NPSAIGASGWSSVDVSTLAPNIQEEKLSLEPLPKASNKNCDGSRKKMRLLSQKLSLKS VPEENTTTGKKDLVTNHLSSTARPTDPTACLSDVSGKLNDTSESISVIADSAVTSKKE YQGTRRNLQLLGQGLPVTSEGPSKNSNGSVEDKLPNHLLASASSNTKHPVMGSSDNAL EKSSAKRIGESLDSLYKASEGDGTNVRSLGQKLSLKSAKPESKSNVQKENMAPNHLPS LSGFSNLDKRQSHVISGGNSIGHTNLVQQNSNNENVLPSTQLIPSKECNQGRKKLHLL SKRLSLKSELPADKTIEKEYMQTDCSQNNRKPNELPLSAPVLKNQILGTIDPQKDARQ SKSSIQQNTTPVERIVVSDSEDSADECERPSRSRLSLMRRRLAGKPRS</aaseq>

Gene Sequence

<dnaseqindica>1043..1178#1315..1384#1462..1567#1702..1800#1936..2058#2171..3307#ctcgtttttgcttgcctttcgcgacgccgcgccatcgccttcacttcttcccgcctctcgcctccaaaaatccccttcgaaacgagacgcgggagctcgcgatcgccgggcgcaaccgaggaggaggaggaagacccttgccgttgtggccgccggagctggtcgccgttgatgcggcaggtaaggatctgacatgctcccgctgtgctccaatctgcggccggcctcgtccggggtcgccaactgttcgacgcaattccccactagccgccatggcgcctgcgaatgagaagcgacgcgggggggggggggggacaccgcgcgccagttggtccgctgatggtgcggtctgctggtgaaatgtagagtgctgatttatttgccttgaaggcttgaacacatgggggttgtaagctgtctggttttcaccttagagctttgctcctgcttcgtgaaagtgctgaatttagatgcgtgcagcgtgtgtagttgtgttggacccattgttctagctttctaggtgaagcgaacaatttctttctatcttaaattaatgatgaacaagttacacggattaaagactgcatatatccggttggatgtagaggccaggtaaaatacccttctctaaaaaaaaagttacatggattaaggagaagagggaactactcctatatgagaattgagaaccatgaagaacttctcatctgtgatctttgatagcttgcccttacttgacataatcattgcaaactagcaggattcagtatattcttaaagaaaaaaaaatcaaaccacaagcattgttctctgcaaatttgtactatgttgtcctcatgtcttgtttcagttgtatacgtggtgcacaagactacattatttggtacagatgaaatatggatcaagaatattgtgcaaaacaatgttcatgcatgtccttttatcttaatgtgtatgagttaaatgctttaatgtttgagttgtcaaccactgaaaagtaatgtacctttaattttcaggccgataccctttaaattattagatggctcaggctgcaagactgaatctgcgaatgcagaaagaggttaagcttcttctaaatgatccacctcatggggtctcccttaatctttctggggatgaaagtgccttgtcatcgttgttgagtttcgaggccagtacgttctttgtcttttcagtactaaccctatgcccctagcagtatatcatttttttctactcaataattaaatctggcatgctaactgttattgcccttgctttgcatttggcatccctgctcattaaataaaggaatacagggacctgatgaaactgtttattcaaaaggagtttttgttctgaagatccaaattcctgaaaggtattataatggaaaccaacttgtgtttcacttatgattcatcatgttctgaaggttttgcttttgctgcgatgcagatatccttttcaacctcccaatgtgacatttgttactcctatttatcatcccaacatagacaatggaggacgaatttgccttgatatactaaatttaccaccaaaggtaattgttaggagttactttacaactagatgaattgctgtgcatgacttctgaggtcttaaaattcaacaatttatacttcctcttaaaatttcaaacagtttgtgttatattgaacaaatactaatgtgcagggtgcctggcaaccatcgctcaacattgctactgttttgacaagcattggtttgctgctaagtgacccaaaccctgacgatgggctgatggctgaaatagtaagtagtacattttactgcaaggaagtagcaagtgcatttccatgggaacagcaggagaatagtgatacataatattaatatgttaagtacttgtccttcatcttaaagcagtattgttgttttctgtgacagagtcgagagtacaaatacaacagacaagtttttgacataaatgctcggtcctggactgaaaagtatgctaatccttcagcaattggcgctagtggttggagctctgtagatgtttcaaccctggtaaagaagcatatcaaattatggattcaattttgctgagttgttgttccaatagtgtgatagttttctcttgatgtttgcttgagcttattgtgtgttatcaaattttcaggcaccaaacatacaagaggagaagctaagcctggagcctttgccaaaagcttcaaataaaaattgtgatgggagtagaaagaagatgaggctacttagtcaaaagttatctctgaaatcagtacctgaagagaataccaccactggcaaaaaggacctggtgacaaaccacttatcatcgacagcaagacccactgatcctactgcatgcttgtctgatgtttcaggcaaactgaatgatacctcagaaagcatatctgtcatcgcagatagtgcagtgacttcaaagaaagaataccaaggaactagaaggaacttgcagttacttgggcaggggcttcctgttacatcagaaggtcctagcaagaacagtaatggcagtgtggaagataagttacctaatcatcttctagcatcagcatcatcgaacactaagcatcctgtcatgggatcttctgataatgctttagagaagagtagtgcaaagcgcattggtgagtcattagatagcttgtataaagcatcagaaggcgatggtacaaatgtgaggtcacttggtcagaagttgtcactgaaatcggcaaagcctgaaagcaagagcaatgttcagaaggaaaacatggctccaaatcatctgccttcattgtcaggcttcagtaatctggataaaagacaatcgcatgttatttcagggggaaattccattgggcatactaatctggttcaacaaaattctaacaacgaaaatgtacttccaagtacccagttgataccaagtaaagaatgcaatcaaggccgaaagaagctgcatttactaagtaagaggctgtcattgaaatctgagctgcctgcagacaagaccattgagaaggaatatatgcaaacagattgttctcaaaacaacaggaagcccaatgaacttccgttgtcagcgcctgtcctcaaaaatcagatcttgggtaccattgatccacagaaagatgccaggcaaagcaagtcttccatccaacaaaacacaactcctgtggagaggattgttgtttcagatagtgaagatagtgctgatgaatgtgaaagaccttcaagatcaaggctctcattgatgaggagacgattggctggaaaaccaagaagctaacttgacccaaaatcttcggcgtttcataggctaccgtgtaaagtcatggaagatggcaatgcttcagtaaattctcttgactgtttatgatcacatatgtgatacgttcttatctttatgttgccctatctatgatatgggtgttcggacttcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0605300, RefSeq:Os01g0605300