Os01g0605600

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0605600| Description = Conserved hypothetical protein| Version = NM_001050056.2 GI:297597166 GeneID:4324212| Length = 4926 bp| Definition ...")
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Gene Name

Os01g0605600

Description

Conserved hypothetical protein

Version

NM_001050056.2 GI:297597166 GeneID:4324212

Length

4926 bp

Definition

Oryza sativa Japonica Group Os01g0605600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25513639..25518564

Sequence Coding Region

25516257..25517265,25517627..25517820,25517973..25518059

Expression

GEO Profiles:Os01g0605600

Genome Context

<gbrowseImage1> name=NC_008394:25513639..25518564 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25513639..25518564 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caggcattgaagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtggaactaaatctcattcagatgcaaactcttcctctacattgacccaaccagggctaataaataactcaatggaagatcgggttgttgtttatgcacctaatgaagttgatggttcaacagtaattgcagatgctcgtcaagcatatcagcattacgatccattatcagttgttttagattgtcaattttgtggagcttgtgttgccttgtggcctttttcacttgtagaacgacctcttcaactctttaagctgatatcagattctagtaggcaagatgagcaaactgaggggcatgctggcagagtcagtggcgcaggaccttcaaagactgcgaatattggttttaatttcactattgctggtggtcctccgccaactagacagaattttcggccaagagtttccttacctgttgtcagtcgacatttgaaagctgacttaagctcccatgggcattttatttcctctggaagtgataaccacatggttcctgttactttgcatgcttcagggctgaccaaacacaaaagaagcatggatgagtctcatatgttggaaggcaacaatacaatctcaactgatgctggcacaaccaccaatggagcagatcatcaaagagagaattctgtaaatggcacatcaaacttggtagcaaaccctgaacaccaacaagggggttcacattcagatacaagtagggttaccagcacaggagaagtttccaatgaagaatcagaaacaggtcatgctgcaatcaaaagtcacacaagcacagatgaacttggccaacatggatcagatcctaaatctttaccagttgaagattcttctaatgctcatgatttggcaaagacttgcacgaacaattccaggccagttcaggctgccacactcacaaaatcgtctaacgatggggaaaagggcgcatctcaaccatcaggaagccaaggcctgtatgacaaattgaatgaatttgatcctatgaagcagcacaggactttctgcccttggatatgccctgatggtggtgaaaccttgcctggatggaggctgacactgccggcattactttctcaggacaaaagaattgatgaggattcacaagtggagcctcagattagccttcttagtgaggaggatgaccctgttacgtctgttagaaagcttttcatgacaccaccttcaaagaagttgaggatacatcgggcagagaagggctga</cdnaseq>

Protein Sequence

<aaseq>QALKIISLCGWEPRLLPYAVDCGTKSHSDANSSSTLTQPGLINN SMEDRVVVYAPNEVDGSTVIADARQAYQHYDPLSVVLDCQFCGACVALWPFSLVERPL QLFKLISDSSRQDEQTEGHAGRVSGAGPSKTANIGFNFTIAGGPPPTRQNFRPRVSLP VVSRHLKADLSSHGHFISSGSDNHMVPVTLHASGLTKHKRSMDESHMLEGNNTISTDA GTTTNGADHQRENSVNGTSNLVANPEHQQGGSHSDTSRVTSTGEVSNEESETGHAAIK SHTSTDELGQHGSDPKSLPVEDSSNAHDLAKTCTNNSRPVQAATLTKSSNDGEKGASQ PSGSQGLYDKLNEFDPMKQHRTFCPWICPDGGETLPGWRLTLPALLSQDKRIDEDSQV EPQISLLSEEDDPVTSVRKLFMTPPSKKLRIHRAEKG</aaseq>

Gene Sequence

<dnaseqindica>2619..3627#3989..4182#4335..4421#aagcagcggcggcctctcctctccagccccgacgacgcatcgccgctcgccgccgatccactcgtctcgcgccaccccacgatggccaccggcggcggcggcggcggggacatcggcgccgactcggagcggcgcctcaagaaggccatggacaagctctaccacttccccaagcccaaggctggcacggggcccggctcctccaagccctcttccgcatccacctcctccgctctcaggtagggttcgctttcgctttgccctaatcctagccatggccgtgccccgtatctgcatctcgcatcatcttgacgtgtgcccctggcgtgctgatctggcggccgtgcagcatcgggagggcggggaaggcggctggcgcaggggggaggaggttcgggatggtgcggggctcgcggctcccgtcgcagctcgcggccatgtcggcgatctcgccgccgccgccgtgccgcccgtgggaccgcgccgacctcatgcggcggctcgcgaccttcaaggccatgacctggttcgccaaacccaaggtacgcccagttctaccctccgttggtttgcatcagctgaccgctggccactgattgtggaaaataaaagcgttacacctagctaagtggtttggtgcactttgtaatatactgcaataatcatggctaatgaatggagtttttttagatcgaaatggatgtttaaggtctctctcaattgatcggtgaaaattgctaatgaatgtatggttatgtcctggaattgttcctctataaattggttcggtttggggttatgaattggtgatgctgctgttcggtgaggggttatgtatggtgatgctgtcattggtaaattgtggaatcagtgagtttgttagtgtccttctctccattgtgtttgagaatcggaagggagatatctttgcagttgttgaaccagcatgcttagctcaagtatcttcgctgctttctgataggtgataacaagttgtcctttccaggttattagtccagttaactgcgcaaggagaggatggattaatattgagcccgatgttataacgtgtgaggcatgtgaggcacggcttctgttctccactccttcctcatgggcaccgcagcaaggtttgtgcattgttgtacttgactcgtgttccatctcaactactgtcaagaagcctataaataggcatacacttatatttggattttatatgaagaaagttaccattatgttttagaatgagggtgtattcaatgagtatagttttcatgccagttcatgcgaacctccaatatcttggcatcaatggcttccttgatttaagcatctgtttatatttattttcttacatctaaagctatttgccctgcagttgaaaaggctgctgctgtttttagcttgaagctggacaatggacataaactactctgtccatggattgacaacatatgtgatgaatcacttgccttatttccaccaacaccacctcctgttttagttgagaattaccacgagggtttctcctcacttctacgactctcagcacttccaagaatctcgtgctcttctctggagagcatgaagaagaggagcccacagctagagcagtttctattgaaaccgttctcttcatcagttgtccttaaagggggatttatacttactgaagattcaacaattaaggatttggatcacacttttcaagatgctgacacatattatcaggtcaggtttttgattatgctcaattgcttgctgtgagatttatcttttaaaattttacatacccatttcatttctagattacactttagtatgtctccatgatattggtttataaaacatgttccgcatgatgaataatgcctgattgctacagcaagagttactttgtttttgtgactcatttgatggatcatgcacaatacacatatgtaacttcctagttttaccacctatatacagtcttcactggatatcatgttcagttgtccatgcatatccaccagttgcatgcagaattagaaattcttatgctctccttttgtttccttgctgatcctgtcatatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtacaagttttgaagtagtttgtgtgctattataaaattgcaatatttagaactagagtatagagtattttattttacttcatacagatgcaaatcctttgcaaggttcttgataaacatctacaatagcatattgttaggtttcatcaactgtgcacaattttatataacccgaggaacgcacttaatttctgtttgctacaagctgacttgtcagttctattggcattaaatcctcctacttatcttaggcattcatattactttctatacagaccctggattacattaactcttgtgtgcattttcatttgcattttttgttgtgcccaattcacgtgcaccacatcttgtctccctgcatgctaactaaatgctgaactgcctaacaggcattgaagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtggaactaaatctcattcagatgcaaactcttcctctacattgacccaaccagggctaataaataactcaatggaagatcgggttgttgtttatgcacctaatgaagttgatggttcaacagtaattgcagatgctcgtcaagcatatcagcattacgatccattatcagttgttttagattgtcaattttgtggagcttgtgttgccttgtggcctttttcacttgtagaacgacctcttcaactctttaagctgatatcagattctagtaggcaagatgagcaaactgaggggcatgctggcagagtcagtggcgcaggaccttcaaagactgcgaatattggttttaatttcactattgctggtggtcctccgccaactagacagaattttcggccaagagtttccttacctgttgtcagtcgacatttgaaagctgacttaagctcccatgggcattttatttcctctggaagtgataaccacatggttcctgttactttgcatgcttcagggctgaccaaacacaaaagaagcatggatgagtctcatatgttggaaggcaacaatacaatctcaactgatgctggcacaaccaccaatggagcagatcatcaaagagagaattctgtaaatggcacatcaaacttggtagcaaaccctgaacaccaacaagggggttcacattcagatacaagtagggttaccagcacaggagaagtttccaatgaagaatcagaaacaggtcatgctgcaatcaaaagtcacacaagcacagatgaacttggccaacatggatcagatcctaaatctttaccagttgaagattcttctaatgctcatgatttggcaaagacttgcacgaacaattccaggccagttcaggctgccacactcacaaaatcgtctaacgatggggaaaagggcgcatctcaaccatcaggtaaggatttcatttctatagatttggacaacgtaatgtcaagtactaattgtttgtttgctatatattctgtgcaattgccacaatttaaaggaattgaaagagataaataagcagaatattgaagggactggaaaagcatggagaataccaggagtaataacttgttagttaacttttatatagttgcaagagtttgagaacttctaatctaactacagttagcctactaacttcttgtaaatgttgatattgcacaaatagaatagttcttatttattgatgtctttaattaatggttttgaaatgtctgttgattctcagttcatatcataagcttaacaaagtctttccgttacaggaagccaaggcctgtatgacaaattgaatgaatttgatcctatgaagcagcacaggactttctgcccttggatatgccctgatggtggtgaaaccttgcctggatggaggctgacactgccggcattactttctcaggacaaaagaattgatgaggattcacaagtggagcctcagattagccttcttagtgaggtagtgctttttgttgaatcctgttcaatttccttttaactgtaagcttgcagtactgaatcctgtcttgtttctttttaactgctaccttagcagtattgaatgcaccatgtttctctctaatcatggccttacggtttttataatttcaggaggatgaccctgttacgtctgttagaaagcttttcatgacaccaccttcaaagaagttgaggatacatcgggcagagaagggctgataagtcagaactgtattggccagagttgggtgttcaggcgagtctcttccaatctgtctaaacatgtttgggacactggtcgcgagctctccacctgtggccatgagtactgtgatagaagccaaactgttttcacgggttccctagaaccagatttgttggcgagacggctgaaatcatgagacacgaccagccaaccaggtctgctgaaatctgtctgtatgcattgtataaatgtcgggtggtgggaacaaggaaagaaaagcgtaaggatttgtggtttgttccaacggcatgcttgattaggacgaacactgcctggaaatcttactgtaaagaccattggttattccttcctttcatggtggtttaaagaaaaaaaatggagggcattcatttcctcccccctggaatttttgtagcttattactagtaatgtttgtggttccagcacctgtgtaaactgttgctccaaaaagagtcaagctttgcagctgtttgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0605600, RefSeq:Os01g0605600