Os01g0606100

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0606100| Description = Quinonprotein alcohol dehydrogenase-like domain containing protein| Version = NM_001050059.2 GI:297597174 GeneID:4324...")
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Gene Name

Os01g0606100

Description

Quinonprotein alcohol dehydrogenase-like domain containing protein

Version

NM_001050059.2 GI:297597174 GeneID:4324215

Length

2870 bp

Definition

Oryza sativa Japonica Group Os01g0606100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25542164..25545033

Sequence Coding Region

25542164..25542632,25544036..25545033

Expression

GEO Profiles:Os01g0606100

Genome Context

<gbrowseImage1> name=NC_008394:25542164..25545033 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25542164..25545033 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcctccctcctcccgcttctcctcctcctcctcgccgccgccgccgccgcctccgcctccgcgcgccacgtcatcaccttcaccccagcccgcggcgtctcccccgcctccctcgcctgggaccccacggcgcagcacttcgtcgtcgccggcggcggcgaggccgtcctctccgtctccgacgccggggtcaccgagtcgatcgcgtcccaccgcggcgcctccgccgtcgccgtcgacgaccgccgccgccgcctcctcgtggcgtccccgggctccgtctccgcctacgacctccgcacaccgcggccccacgcgcggctcttctccgccacgctccctgaccccgcggcgccgccgggcggcgtcgcggtggacccgcactccggcgccgccttcctcaccgtgggcgcgcggatctacaaggtgtcccccgacggcgacctcgcggcgctccccccctcgccggcgtacggcggccccgacccgctcgcctccctcgccgcgcacgtcagccgcgggttcctgctcgtgggccagcccagcacgggccgcctcctccgcgtcgacatggaggacggcgccgcgcgggccgtgtcgggagccctgacgcccccctcgccggccgcggtggcggtgcggagcgacgggacggtggcggtgggcggcggcgccacgctgcgcctcgtcggcagcaacgacgggtggtcgtcgtgcgccgagcgcgacgaggccgagccggacggcggcgccgccgccgccgtggcggccgtggcggtgagggagcggaggcgggtgtacgcgctggtggcggcggcggacgcggagaaggcggcggcgtggcggatcgaggaggtgtcgtggaagaaggaaggcgaaggggagatggttgtgggcttcgtcttcgtcggcgtcgcgctcgccatcttcatgttctggaggttccaaatgcgggagctcgccggcagcatgaacaagaagatcagatatacagaagttccaacaccagcggaggccgacggcgcggcggggcgctctccaccaacatcaatggccggcggcctcctcagcaaagcgtccagcgccgtggccgcctgcgcgcgccgcgtgtcgcgcgccacccgccgcctcctccgcgcgcgcctgctccgccggggcggcggcggcggtggtggcgagaccgggaagcccgacggcggtggcggcggtggtggcgaagggctgtggcggcgggcgatactgatgggggagcggtgcgagccgctcagcttcccgggcgccatccactacgacagccgcgggcggcggctctcgcagccgcgccgcgccaaggcgaagccggcggcggccaccgccgcgctgctctgccgctcgtcggacgccgtcgacgaggccgtcgcggcggcgaacaacagcaaggccgccagatacgtggcggtgtcgctgctccgagactag</cdnaseq>

Protein Sequence

<aaseq>MAAASLLPLLLLLLAAAAAASASARHVITFTPARGVSPASLAWD PTAQHFVVAGGGEAVLSVSDAGVTESIASHRGASAVAVDDRRRRLLVASPGSVSAYDL RTPRPHARLFSATLPDPAAPPGGVAVDPHSGAAFLTVGARIYKVSPDGDLAALPPSPA YGGPDPLASLAAHVSRGFLLVGQPSTGRLLRVDMEDGAARAVSGALTPPSPAAVAVRS DGTVAVGGGATLRLVGSNDGWSSCAERDEAEPDGGAAAAVAAVAVRERRRVYALVAAA DAEKAAAWRIEEVSWKKEGEGEMVVGFVFVGVALAIFMFWRFQMRELAGSMNKKIRYT EVPTPAEADGAAGRSPPTSMAGGLLSKASSAVAACARRVSRATRRLLRARLLRRGGGG GGGETGKPDGGGGGGGEGLWRRAILMGERCEPLSFPGAIHYDSRGRRLSQPRRAKAKP AAATAALLCRSSDAVDEAVAAANNSKAARYVAVSLLRD</aaseq>

Gene Sequence

<dnaseqindica>2402..2870#1..998#atggccgccgcctccctcctcccgcttctcctcctcctcctcgccgccgccgccgccgcctccgcctccgcgcgccacgtcatcaccttcaccccagcccgcggcgtctcccccgcctccctcgcctgggaccccacggcgcagcacttcgtcgtcgccggcggcggcgaggccgtcctctccgtctccgacgccggggtcaccgagtcgatcgcgtcccaccgcggcgcctccgccgtcgccgtcgacgaccgccgccgccgcctcctcgtggcgtccccgggctccgtctccgcctacgacctccgcacaccgcggccccacgcgcggctcttctccgccacgctccctgaccccgcggcgccgccgggcggcgtcgcggtggacccgcactccggcgccgccttcctcaccgtgggcgcgcggatctacaaggtgtcccccgacggcgacctcgcggcgctccccccctcgccggcgtacggcggccccgacccgctcgcctccctcgccgcgcacgtcagccgcgggttcctgctcgtgggccagcccagcacgggccgcctcctccgcgtcgacatggaggacggcgccgcgcgggccgtgtcgggagccctgacgcccccctcgccggccgcggtggcggtgcggagcgacgggacggtggcggtgggcggcggcgccacgctgcgcctcgtcggcagcaacgacgggtggtcgtcgtgcgccgagcgcgacgaggccgagccggacggcggcgccgccgccgccgtggcggccgtggcggtgagggagcggaggcgggtgtacgcgctggtggcggcggcggacgcggagaaggcggcggcgtggcggatcgaggaggtgtcgtggaagaaggaaggcgaaggggagatggttgtgggcttcgtcttcgtcggcgtcgcgctcgccatcttcatgttctggaggttccaaatgcgggagctcgccggcagcatgaacaagaagatcagatagtaacagcattgcaatgctctgaactccaaattgttctaggatatttttgatttctggttgaatttaggaggattttacttggttttgttgcgcgacagttggtacagacacttgtagaatagaaattttactcatcatcgaaccatgaatctatctacgacgacagaagaggatagtagaaatgatcctggttttcagttgtttattggaagtacacgatgtagtagaatttgatcaaaaggctgttacggttatcttggttcatgaatgcaaagtgcagttcacatcagctgttgtaaatgattattacttctataaaattctaattcattactacctacgataacttcttaaagtgtttatcatactctgttccaataagtgtttctgcagtttgtatgatcgtgggttggataattgaagctggtaatgttcctgcaaatcagtaagagcgtgaatggtagtatggaatcctatgcgcgtgtgtttcagaaccagcagcgctcagccgtttcctgttggttcaatcaaaaggaagtggcgatttggaaggaagctggggttgaagtataggagagtagtccctcagtgtaatctttttcttttgggaggttttgctcgtgacaacttccattacttcgacagcttcttgttgaacttaaaattttttatatttgtatatatttttcaatcttaagtaaatttggttggtctattttggcctgcccggcaaacatgcagccgcatgcctatgcatttcacctttttttttttgcaataaggacgtgtatggtgcagccttgcaatagtagcatatatgttgtccattgctgtgttgcaaaaatcaaaattaaattcaaattttctgacaaattttgcatgaatttcattggtttttgttgatgaccactcagtcatcgatgaaactactggtgagcggtttttggttggcaacatttttttttaaaacactgcacattgtacatgcaggaggggatatacatttcagtttcttttgataggaaaataacggtagctgtgcaatgttgatgagcttctgcaatccaaagaaagaagggctttattttgtaaccagcaaacgatcacttcttaggctggttaaggatgatcaggcgtttgctgtaacttccaagcatttgaattgtgccaaaactatcattccaaacaaaagattttatatgggccagataattctttgccaacttccaaccccaaggatagtcatgcattaaatactgccaatatataatgatgcaaatttttttgtatcctttctcattggaaaaagatttactccttaaaagcattaattcccaagaagaagaaaaaaaatgtatttattcctttgcaatctgcattgccctgtactactagactcgagtacagaagttccaacaccagcggaggccgacggcgcggcggggcgctctccaccaacatcaatggccggcggcctcctcagcaaagcgtccagcgccgtggccgcctgcgcgcgccgcgtgtcgcgcgccacccgccgcctcctccgcgcgcgcctgctccgccggggcggcggcggcggtggtggcgagaccgggaagcccgacggcggtggcggcggtggtggcgaagggctgtggcggcgggcgatactgatgggggagcggtgcgagccgctcagcttcccgggcgccatccactacgacagccgcgggcggcggctctcgcagccgcgccgcgccaaggcgaagccggcggcggccaccgccgcgctgctctgccgctcgtcggacgccgtcgacgaggccgtcgcggcggcgaacaacagcaaggccgccagatacgtggcggtgtcgctgctccgagactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0606100, RefSeq:Os01g0606100