Os01g0610500

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0610500| Description = Yip1 domain containing protein| Version = NM_001050080.1 GI:115438459 GeneID:4327734| Length = 3012 bp| Definition ...")
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Gene Name

Os01g0610500

Description

Yip1 domain containing protein

Version

NM_001050080.1 GI:115438459 GeneID:4327734

Length

3012 bp

Definition

Oryza sativa Japonica Group Os01g0610500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25807924..25810935

Sequence Coding Region

25808147..25808353,25808754..25809021,25810241..25810463,25810557..25810677,25810766..25810825

Expression

GEO Profiles:Os01g0610500

Genome Context

<gbrowseImage1> name=NC_008394:25807924..25810935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25807924..25810935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtctggcggtggctactccgccctcgacgaccccaaggcctccggatccgtcccggcggcgacggggccagatccgccgaccatcaagttcgccgactccaacctccagatcttcccgccgtccgaggccaagggcaagatctccggcgcctaccgcccgcccaccgacgcggatgacacgttctcttcctccaagtccgggggcggcggccgaggcggcggcggcggcggcgctgggtcggacgacgccgggcagggcgggtggttccggatgttctccgtcgcggcgtacaagccctacttcgacgtggacacctccgacgtggtggagaggatctgggagtccgtcttccccttccgcggcaccttcaccgagaagacctccgagaaccccgacctatatgggccattctggacatgcaccaccctgattttcgttgctgcatccattgccacatttgtcacctacctatcccacaaatggcataagaaggagtggaactatgatattaacctggttacatggtctgctggcttattctatggctacgtgacatttgttccccttggtctatatgtcatccttaagtacttctcagcacctgctggactagtgcaactatggtgcctctatggatactctttattcatcttcattccagcatcgctcctgtctattgtgccaatagaaatattcaggtgggtgattgctggtgtcgcggggtttatgtctgctaccttcgttgctatgaatctgcgcgctcacattgtaaattctggagagcgatggttcttgatcgttgcagggatattcttgttgcagttgggattggctgttttgctgaaactctatttcttcacgataactgtatag</cdnaseq>

Protein Sequence

<aaseq>MMSGGGYSALDDPKASGSVPAATGPDPPTIKFADSNLQIFPPSE AKGKISGAYRPPTDADDTFSSSKSGGGGRGGGGGGAGSDDAGQGGWFRMFSVAAYKPY FDVDTSDVVERIWESVFPFRGTFTEKTSENPDLYGPFWTCTTLIFVAASIATFVTYLS HKWHKKEWNYDINLVTWSAGLFYGYVTFVPLGLYVILKYFSAPAGLVQLWCLYGYSLF IFIPASLLSIVPIEIFRWVIAGVAGFMSATFVAMNLRAHIVNSGERWFLIVAGIFLLQ LGLAVLLKLYFFTITV</aaseq>

Gene Sequence

<dnaseqindica>2583..2789#1915..2182#473..695#259..379#111..170#gaagcagccgcattcacgcgcccctcctgcctaacccaccaccgctttgctcctcctccacgcttcgtccgccgccgccgccgccgccgccgtcgccgtcgccggcgaagatgatgtctggcggtggctactccgccctcgacgaccccaaggcctccggatccgtcccggtaagcttccccgtccccgtcccctcccacgccgatgggttttctcctcaccctcctcacctccgcgctcctcgtcggggtttcgcaggcggcgacggggccagatccgccgaccatcaagttcgccgactccaacctccagatcttcccgccgtccgaggccaagggcaagatctccggcgcctaccgcccgcccaccgacgcggatggtcagatcagatcccccacctcctcctcctcccattgatttcttcgtctggatctgaccttgcttgtggttggtgcttttgctgcctgcgcagacacgttctcttcctccaagtccgggggcggcggccgaggcggcggcggcggcggcgctgggtcggacgacgccgggcagggcgggtggttccggatgttctccgtcgcggcgtacaagccctacttcgacgtggacacctccgacgtggtggagaggatctgggagtccgtcttccccttccgcggcaccttcaccgagaagacctccgagaaccccgacctgtatgcctctccatcgcctaactcctccttaccttagtagtagtactatagtttgcattcgaatgttcctagagatcatatgctcaggtagcggatatggttaatagcattgacagactatgaacgtcttctgttgttttgctggaaagtccatgatacttatttgcgtgcacaatgtgataattttgtctgggtatttcagaggagttggtcacataggtgtaagaaatggggattttaagataatgaactgataggaggaatttgattgctccagcaaaatagcctagtcttctcgatgacatgtcttgcatttggttaagagtgagtagcgcaataatttcagctcatagcgacatgtaattagttgttagcatgtcttaggtcggtagaatacttctatatctctttttgtatgttgttttcccgttcttcttgctgagagttctatgacaaagaatgaataattccgaggacttgttgtaacaacatactaaaagggagtctaggattttcctttagccttcactgcctaaacttatttttatttttacaatgacatgtcctacccatgcttggatcattccattgttatttttcatttcaaagctttgtttcatctactttgtcttgctgtgtgcaccattatctttctgttgaacttatcttgagagtgtttatggtaacagttctaagattgccttttgaatgtaccttgtgccttgttcaacatcaccgtatggtgtcaacactaagtaaacttgaatgtttgtaccaattcatgtgtcatgaaaatagcagattagcagtacaagtctataccatgggttactattattaggtgaagaggcatttgtaagtggcagtgggataccattgtgaaaaacttggcaaatatgcaggactgaatatattgagatgatagcaataaattatattacctaaacagcattttcctgaatttctcaatgtctgaaatctgaagcaatgggtgctgtttgatcatttgcaaatagaactttgtgtttcgatatcagctaacctattaattcagtggaaactctgcttttggaagtattatttcttttttcagataatgataaattccttgtaaataaatagctctgcaatttaagtgttttatcaagttattgcactttcaaggaattgaagcactggttatatgcctgctaattttcatttcaattaaattttgtagatatgggccattctggacatgcaccaccctgattttcgttgctgcatccattgccacatttgtcacctacctatcccacaaatggcataagaaggagtggaactatgatattaacctggttacatggtctgctggcttattctatggctacgtgacatttgttccccttggtctatatgtcatccttaagtacttctcagcacctgctggactagtgcaactatggtgcctctatggatactctttattcatcttcattccagcatcggtaaggaaaatcctaaaacttagacaatagaaattaattcttcttatagtgttgtcgattttgttatggttaattatcttgtttagaaggcttccatttgggtttgatgtaagtgtgctggatatatagcgttacaaagcaatcagttccagtttgccgtttctaagaagttgcactactttagattcaaaaaactaattcattaccaaggaccatagtttgtgttgtaaaaatatccgttatttaccgaatctctatcaaggaagttgtctgttatgtgttgttgtctccatgccctattaacatgcaaacccatagtctcttgtttagtgattatctattggttgttgagaaagttgagtaacttctgcatgaatttaacactctttccatgtgacagctcctgtctattgtgccaatagaaatattcaggtgggtgattgctggtgtcgcggggtttatgtctgctaccttcgttgctatgaatctgcgcgctcacattgtaaattctggagagcgatggttcttgatcgttgcagggatattcttgttgcagttgggattggctgttttgctgaaactctatttcttcacgataactgtatagggaactgccatacttgcttgtattagtcaggattggatacacggtttttcaggccgaattactcccggattcgttgatgtaattttccaagtatacatccatcttacatgtgacattgtgacaaggaaaggccgcttcgttagcgtacgagacgtattacaatggcaagacttgtccatggattattacgagattaaggcttaaagaatccccttttgtagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0610500, RefSeq:Os01g0610500