Os01g0612500

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Revision as of 04:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0612500| Description = Phospholipase/Carboxylesterase family protein| Version = NM_001050091.1 GI:115438505 GeneID:4325318| Length = 3905 b...")
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Gene Name

Os01g0612500

Description

Phospholipase/Carboxylesterase family protein

Version

NM_001050091.1 GI:115438505 GeneID:4325318

Length

3905 bp

Definition

Oryza sativa Japonica Group Os01g0612500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25933941..25937845

Sequence Coding Region

25934066..25934090,25934193..25934304,25936164..25936200,25936474..25936543,25936713..25936817
,25936940..25937090,25937189..25937271,25937354..25937502

Expression

GEO Profiles:Os01g0612500

Genome Context

<gbrowseImage1> name=NC_008394:25933941..25937845 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25933941..25937845 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctacgggagcagctcttctggggggcgaggcgggcggcgggtggagtacgggaggacgtacgtggtgaggcccaaggggaggcaccaggccaccattgtgtggctccatggcctcggcgacaatggcgcaagctggtcccagctactggattctcttcctctgcctaatatcaaatggatttgccctactgcaccaacacgccctgttgctgctttcggtggattcccttgcacagcatggtttgatgtggaggacacttccgtggatggccgtgatgatattgaagggcttgatgcttcagctgcacacgttgcaaacctactgtcatccgagccatctgatgtgaagcttgggataggtggtttcagcatgggtgctgccgctgccctccactctgctgcatgctatgctcatggaagattcacaaacggcgttgcctacccggtcaccctcagcgccgtcatcggtttgagcggttggcttccctgttcaaggactctgaagagcaagatggacagctctcagactgcactgagaagggctggtgccttaccaatcctgctcagccatggaagagctgatgaggttgtcacctacagaaatggtgagaaatcagccgatttcctgcgaggctcgggttttcagtatctgaattttaaaccctacaacgggtatagacacacttacttaattttccccatcttcatttttttctctgaaaactag</cdnaseq>

Protein Sequence

<aaseq>MSYGSSSSGGRGGRRVEYGRTYVVRPKGRHQATIVWLHGLGDNG ASWSQLLDSLPLPNIKWICPTAPTRPVAAFGGFPCTAWFDVEDTSVDGRDDIEGLDAS AAHVANLLSSEPSDVKLGIGGFSMGAAAALHSAACYAHGRFTNGVAYPVTLSAVIGLS GWLPCSRTLKSKMDSSQTALRRAGALPILLSHGRADEVVTYRNGEKSADFLRGSGFQY LNFKPYNGYRHTYLIFPIFIFFSEN</aaseq>

Gene Sequence

<dnaseqindica>126..150#253..364#2224..2260#2534..2603#2773..2877#3000..3150#3249..3331#3414..3562#ccgctttctcctcgatccagagctatacatatccatcagcagcagcagcagccaaattcaccatcctccagcgatcgatcgatcacctgcagtactagttctctcaagcttcttggtcgccggccatgagctacgggagcagctcttctggtctctctctcacttcctctcttttttctttctttgcttcttcgtgtcttctttctccgccgccggcgtgtgctgacgaacgatcgaatggaatgcgtgcaggggggcgaggcgggcggcgggtggagtacgggaggacgtacgtggtgaggcccaaggggaggcaccaggccaccattgtgtggctccatggcctcggcgacaatggcgcaaggtaacccatcatcacttctctagagttctctctctcgatctcgagatgatgacttctttcttccacagcttaataattatattacacacgaccaaaaatatgcaaacttgtactactactacacgctcccagtttttaatttttaaatgtcctagtagtacacagattttatcacaactactactatactcactccttttttatatacttatatatgacctgaattcaccaaaggtcatatacatgtatattataaaagtaaaaaggagggagtggttcagaaagattggtggtagcttcactagctatagctgcaagtgtttagtatgaatgcaacaaacagagatggatgggacgatctagattgacatggggaacacgaacgaatgaactagcttaggttaggctgtcaagatgttgatatctgcacccaattaatcgctttattctctctcccccgacgttgtactgtaactcgatcgatgcccctttatttttttgctagaaacgatggattcggcctcgccatttctgtccatgcatatattcctaggattgctttttacctccgaattaaagcctgatcatgcatcatctccaattgtcctattctctctctgtctctgctccccgacctcacaaaaatttcctgtagatcgagaaggatggaggtagctagacgatgccgatgtttgcgaaaagaaaattaaccagttggaatatatattggccatctgccactcactacttgtttagagttacacttgatggttttaattgccatctatgtgtcttatgacaaataatccacgtatcttaaattaaacacaaaactataactgtagttggagtgtgagttattatttgtgtggttcgttaagaggcttgtttttaattaatccctcaagggggtggtacacaccgttcaaattaacagttatgaaacattgtattctttagaaaattaaacgatgtagatataaacatttgaacttgcatgtttgtgaagggtgtgtaagatgatcggttatattctctctttttttttatttcaaaatatcttgtttctatctgaaccacatgcaaaaaataataatagcatataaccttgagggattaaaatagtttctttggtttctcttaccacgaaagggtgtagaaacacgaatgcaagaatccattgttgaaggaccaatatgttgattaaatatagaagagatagatgtggattaattacctcatgcttcatgcaaggttctgtctgccaacaaggatgcatggagcacctcagttttgtgatgttgcattaaataacataagtttttttggcattgtttctcttctatgggttttggcagcaaaagcatagaatatgctagccattaattttctttttctgagttcaatatgcatgtgtcaactgtcaagtgtctgcttcaaatgttctcttcccacttctttgcttttcccatcagtactgaattacaatggcatatttcattaataagacgattgtactactacctggaactttcaggagaacacaagaaaaaacttaattatatatacatatgtgctctagccagctcattagctgccttagtttgatccagtgttgtgctatgtcatgttttattctttcctcactctttacttcttttattctccattactttctgataacccttcttttgttgacatgttaatgtcattagatgaagctatagttttgatagaaagccagcacagcactgaaatatctctacacaagttgctgactagctgtaacatgtactttttcttgaaacactggcctaatcttgtttcttgtttctttttcataattttatcttctgcagctggtcccagctactggattctcttcctctgcctaatgtaagataccatactgcactctcactttgcagttgaatcaatcatgcacacaaccatcttcacctacaatcttatttctattcctatccctattccaaatgggcacaataatgcatgtatagacttgttcattctgttatctcttcaaattaatgtaacttatctgaatcactaggttagccatagcaattttttaaaaagatttttagcaatagcattgttcatgctagttctaagtttattaactctcaagcttataccatccttatgcagatcaaatggatttgccctactgcaccaacacgccctgttgctgctttcggtggattcccttgcacagcatgtgggtttctgaaccatttatgacttggccaaaaagaaaaaaaaagaaaaaaaaaagaaaaaaagaagcatgcagctttgctttcctaattttctaggccatttcttttgctgcaacctggctacagattctgatattgccgttctcctttttactgaaattgaaacagggtttgatgtggaggacacttccgtggatggccgtgatgatattgaagggcttgatgcttcagctgcacacgttgcaaacctactgtcatccgagccatctgatggtacattttcagaattgtaccataattacagaacaaaaggaaaaaaaatgtgaaaatattaaataagctttagaatactctgtatttgtcttactgatctttggtggaatttcaaatttcagtgaagcttgggataggtggtttcagcatgggtgctgccgctgccctccactctgctgcatgctatgctcatggaagattcacaaacggcgttgcctacccggtcaccctcagcgccgtcatcggtttgagcggttggcttccctgttcaaggtctgattctattcttcgatcgttttggaaaatgataataataatttaatttgcaatgatttccttacaagtgatgttcttcatgtgttcttatttaggactctgaagagcaagatggacagctctcagactgcactgagaagggctggtgccttaccaatcctgctcagccatggaagaggtgagcaatgcaatcgttttgaactagatgtgtataaaatgtaatgatgctaaaaatgttctacttatttttgcctttgcagctgatgaggttgtcacctacagaaatggtgagaaatcagccgatttcctgcgaggctcgggttttcagtatctgaattttaaaccctacaacgggtatagacacacttacttaattttccccatcttcatttttttctctgaaaactagaataactaacatgatgccatttacacagcctggggcattataccatccctgaagaaatggacgatgtctgcaagtggctcagttcaaggctgggacttgaccgatcccgcggctaattcgaaaatatgaacccggttcagtggctttggtagtgatgtataagagaagaaggtattgacaatatacaggagaaggttgattaggatatgtgaattgtgacagtcatggctttggtagcatatgtaacactatgtgttttccaaacaactgcataccacgttacagttgtagttttctactgatgtactttgttaccgctaaagagggatgcgtataatgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0612500, RefSeq:Os01g0612500