Os01g0612700
| Gene Name |
Os01g0612700 |
|---|---|
| Description |
Zinc finger, LSD1-type domain containing protein |
| Version |
NM_001050093.1 GI:115438513 GeneID:4325320 |
| Length |
5211 bp |
| Definition |
Oryza sativa Japonica Group Os01g0612700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:25951136..25956346 |
| Sequence Coding Region |
25951207..25953481,25954472..25954579,25955068..25955177,25955943..25956017 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:25951136..25956346 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:25951136..25956346 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcaagaacaagctgctggttcagcgcttgccatgttggtaacttacggggagactgatacctcagcagtcagtgtatctccagtactggagagtggggagccagatgcagcccagattgatgtagtagcagggatgcaagaagaagctcctggttcaatgttggccatggaggtaacgtacagggaggttgatgctgcaacagtcagtgtgtctccggtattggagagtgtggagccagatgcagccaagatcgatgtagtagcaaggatgcaagaagaagctcctggttcaaagcttgccatggaggtaatgtacggggagactggtaccgcagcagtcagtgtgcctctggtattggagagtagggaagaggggtcacttcaagaatcaatgcagagaccatcttctcccacaatgaacattgagcaagagtcaatgcagagaccattttctcccacaattggcactgagacaagttcgccagagatggctcctgctggatctgagaactgtaaagtatcatggttgccgttgccccctcctacaccacttggcgaatcaatgccctccttgccagtcgcagctgcccccaaggttttattggtgatgccggaggaagcggttgagtcagtcccttcatcggaagctctggatgttgaaaaacctgcctccatcacacaggctgagcccagctcacctaatacgccaccgccaggatttgagaattttaagtcgtcatggttgccgctacccacgactcctcccccagttgaaaccactgatgtcttgccagatgtggtggttaccaaggcagtggaagcacccattgaggaagtgtctaggccattgccagctttggaggtgacaaacatggagtcagacactgtcctcagtatcttgcccacaacagtcttgccaacagaagggactgagggactactgcaacaaccactattgagacccccttctccagtggtgcaatctgaaccatgtttgcaaaatgagatggcacctccagggttcgagaattttaagtcatcatctgaaccatgttcagcagaggagatagcacctccagggtccgataatttcaaatcatcatctgaaccatgtttaccagaggagatggcacctccagggtttgaaaattttaagtcatcatctgaaccatgttcacaagaggagatggcacctccagggtttgagaattttaagtcatcatggccaccacttcccactctgccccaaactgtaccagatgcagccgcagcggatgctttggcagcaacagtggaagaagcagctgggccaccacctgcattggagttggaggcaatggatgtggacatggatgccatacatccaccaccgctgccttttgacagtggagtggagtcattgcaaaagccactgccaagagcaccttctcccataatgcaagaagcgccctgttcaccagatagggcaccgccagggtttgaaacctataagtcatcacagttactgctaccatctccatctctggcacaaaccacaaatgtgcgacaagatcaatcggtaactgaacctgtgtctgtgatagaggaagcccctcagctactgcactcagtggaggtaatgggtgtacatatggatgcagtacctccattgctaccatcatctgaaagtggagcagatgggctatctccgcagcaattcgcgcaacctcctcctgcagaaaaggatacaacaacctgtttgccagatatggtgcattcaggatgtgacaattcagagccctctcagcttctgtcactgcctgctgttatttctccagttcagaccccagatggcttggctgatgttcctgccattgacagggttgcagtggcattggaagaatcgcctcagcgaccgcttgtatcaggggaaatggaagctggcacagtgcccattcggtcatcaccactgaagaatatttctgaggggtcactgccacaactagaatcagagtcacattctcctacatcacaggctgcagatagcttactagatgcatctgactcaaagtctgtggctgtggcctcagaggagatgtctcagctaccacttgcatcgcaggcaactactacagaccttgtcagtacaactgcaatgcagccacaatctgagggtatagtggatgagtcattgcagcctcagcatccaccctcttctaccgcacatgattcaccttgtttacaggactctgtgccattggtgccaccaccaccttccccttacctaaataaagaagtaggtcaaatggtatgtggaagctgccgtattcttcttgcttattttagaggtgctggttatgttcactgtacttgttgccagacaatgaactatgtattggaagctcatgaagttggtaaggtgcattgtggacactgtgcgacattattgatgtatccttttggtgcgcctgctgttaagtgctcgttgtgcctctttgtcactgaaattggagagcggaatgttcgccgtcggttatcaatcgagcaacccacaagaactaactcatcagggctagctgaagcctga</cdnaseq> |
| Protein Sequence |
<aaseq>MQEQAAGSALAMLVTYGETDTSAVSVSPVLESGEPDAAQIDVVA GMQEEAPGSMLAMEVTYREVDAATVSVSPVLESVEPDAAKIDVVARMQEEAPGSKLAM EVMYGETGTAAVSVPLVLESREEGSLQESMQRPSSPTMNIEQESMQRPFSPTIGTETS SPEMAPAGSENCKVSWLPLPPPTPLGESMPSLPVAAAPKVLLVMPEEAVESVPSSEAL DVEKPASITQAEPSSPNTPPPGFENFKSSWLPLPTTPPPVETTDVLPDVVVTKAVEAP IEEVSRPLPALEVTNMESDTVLSILPTTVLPTEGTEGLLQQPLLRPPSPVVQSEPCLQ NEMAPPGFENFKSSSEPCSAEEIAPPGSDNFKSSSEPCLPEEMAPPGFENFKSSSEPC SQEEMAPPGFENFKSSWPPLPTLPQTVPDAAAADALAATVEEAAGPPPALELEAMDVD MDAIHPPPLPFDSGVESLQKPLPRAPSPIMQEAPCSPDRAPPGFETYKSSQLLLPSPS LAQTTNVRQDQSVTEPVSVIEEAPQLLHSVEVMGVHMDAVPPLLPSSESGADGLSPQQ FAQPPPAEKDTTTCLPDMVHSGCDNSEPSQLLSLPAVISPVQTPDGLADVPAIDRVAV ALEESPQRPLVSGEMEAGTVPIRSSPLKNISEGSLPQLESESHSPTSQAADSLLDASD SKSVAVASEEMSQLPLASQATTTDLVSTTAMQPQSEGIVDESLQPQHPPSSTAHDSPC LQDSVPLVPPPPSPYLNKEVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEV GKVHCGHCATLLMYPFGAPAVKCSLCLFVTEIGERNVRRRLSIEQPTRTNSSGLAEA</aaseq> |
| Gene Sequence |
<dnaseqindica>72..2346#3337..3444#3933..4042#4808..4882#cagcagccagtgtgtctccagtattggacagtggggatccagatgcagctgaggttgatgtagtagtagggatgcaagaacaagctgctggttcagcgcttgccatgttggtaacttacggggagactgatacctcagcagtcagtgtatctccagtactggagagtggggagccagatgcagcccagattgatgtagtagcagggatgcaagaagaagctcctggttcaatgttggccatggaggtaacgtacagggaggttgatgctgcaacagtcagtgtgtctccggtattggagagtgtggagccagatgcagccaagatcgatgtagtagcaaggatgcaagaagaagctcctggttcaaagcttgccatggaggtaatgtacggggagactggtaccgcagcagtcagtgtgcctctggtattggagagtagggaagaggggtcacttcaagaatcaatgcagagaccatcttctcccacaatgaacattgagcaagagtcaatgcagagaccattttctcccacaattggcactgagacaagttcgccagagatggctcctgctggatctgagaactgtaaagtatcatggttgccgttgccccctcctacaccacttggcgaatcaatgccctccttgccagtcgcagctgcccccaaggttttattggtgatgccggaggaagcggttgagtcagtcccttcatcggaagctctggatgttgaaaaacctgcctccatcacacaggctgagcccagctcacctaatacgccaccgccaggatttgagaattttaagtcgtcatggttgccgctacccacgactcctcccccagttgaaaccactgatgtcttgccagatgtggtggttaccaaggcagtggaagcacccattgaggaagtgtctaggccattgccagctttggaggtgacaaacatggagtcagacactgtcctcagtatcttgcccacaacagtcttgccaacagaagggactgagggactactgcaacaaccactattgagacccccttctccagtggtgcaatctgaaccatgtttgcaaaatgagatggcacctccagggttcgagaattttaagtcatcatctgaaccatgttcagcagaggagatagcacctccagggtccgataatttcaaatcatcatctgaaccatgtttaccagaggagatggcacctccagggtttgaaaattttaagtcatcatctgaaccatgttcacaagaggagatggcacctccagggtttgagaattttaagtcatcatggccaccacttcccactctgccccaaactgtaccagatgcagccgcagcggatgctttggcagcaacagtggaagaagcagctgggccaccacctgcattggagttggaggcaatggatgtggacatggatgccatacatccaccaccgctgccttttgacagtggagtggagtcattgcaaaagccactgccaagagcaccttctcccataatgcaagaagcgccctgttcaccagatagggcaccgccagggtttgaaacctataagtcatcacagttactgctaccatctccatctctggcacaaaccacaaatgtgcgacaagatcaatcggtaactgaacctgtgtctgtgatagaggaagcccctcagctactgcactcagtggaggtaatgggtgtacatatggatgcagtacctccattgctaccatcatctgaaagtggagcagatgggctatctccgcagcaattcgcgcaacctcctcctgcagaaaaggatacaacaacctgtttgccagatatggtgcattcaggatgtgacaattcagagccctctcagcttctgtcactgcctgctgttatttctccagttcagaccccagatggcttggctgatgttcctgccattgacagggttgcagtggcattggaagaatcgcctcagcgaccgcttgtatcaggggaaatggaagctggcacagtgcccattcggtcatcaccactgaagaatatttctgaggggtcactgccacaactagaatcagagtcacattctcctacatcacaggctgcagatagcttactagatgcatctgactcaaagtctgtggctgtggcctcagaggagatgtctcagctaccacttgcatcgcaggcaactactacagaccttgtcagtacaactgcaatgcagccacaatctgagggtatagtggatgagtcattgcagcctcagcatccaccctcttctaccgcacatgattcaccttgtttacaggactctgtgccattggtgccaccaccaccttccccttacctaaataaaggttagtatattgcatctcacttcctctaattccatgtctatataactgctattgtttgtgttgacttagtatttgtgatgagtttgggggtctttggaaggtgaaaatgagtcagtgtgagattggatcaaacaccatgcagaggctctgagatgaccaagtttctcaggaaggtctatttcattgataccctgacttgagtacataggacgtccacgtacatggctcactaagctaaagaaacatcttatcctaaatatgattctcttaccactaacaggaaacacatttctatcttatctattctaacctcttaacttggcttccttgatgttcaaggacaactggacaacctggccagccttgcgtgctcatgctactgggtcgtgtttggagttctacgaacagttttctttccattgattaatcatgtaccaatcatatgcccatcttagactatataagtttcctataatttgtgaaaaaagttggcttgttttttgtgattctcagtctttgatatgattttgaaagaagaatgctcatgcaaactgtggctagcagatataaatttaatgaactagttgcgggaatcagcattaagtccttaaagtttaccaagcatgtaatgtgctttcattcattcaaaaaagcatgtaatatgctcacttatatctccattgatcccctatttgtgtatacctggtccctcttaagacagtttcagccaaaatgatgaagtttgattgcaattgtgaaatatagtactaacttttttttagagcaatagatgaaaggaatatactatgcttctgtgtaccttctctttggatgttatccaatccctcaatatcaattcatacatagttgtgaaccaaagaagtcagcttttcacccataaataaatctggggctagtatataagtaatccggtgtaattctctctctctctctctgagcataagtaacctctgttgctaacttgtacagaagtaggtcaaatggtatgtggaagctgccgtattcttcttgcttattttagaggtgctggttatgttcactgtacttgttgccagacaatgaactatgtattggaaggtgcgtactatttctcatttgcccaacagtgttttacttttgttatgccccatataatttttattttgtctttcaacacctatagatatcagccatcttgtatcttacttctgtggaaatacttactgaatactgaacatgctttttctcaaaaatttgccttctgctactgtctaaattatgtgtaagaagtatggttggttacatatttcaacattggaccactcaatagagaactggagaattttgcccttgcctttataatactatttgttcatgcacaccctctaaagctttttcatgcaacacttctgcaaaatatggatgccatttgcgcaaaatttatctcgtctttgtctttccttttgaagcacggctgtccttaatatttccatgtattatagcttttaccaaatactgatgtaccgatgtgtgtatatatgcatcttcttacccttgcatgggttttccccctatgtttgttgcagctcatgaagttggtaaggtgcattgtggacactgtgcgacattattgatgtatccttttggtgcgcctgctgttaagtgctcgttgtgcctctttgtcactgaaattggagtaagtgaactatggcttgtgataaatttacttgctatatgtgcttatttgtgataaatatgttgaaaaagaaggtaatgctacattgaaaaaaagagagagagaactgattatgtactgtgcatgttggtcgagttggtttactttctaatgaatatgactgccttagattctagatttcccatgcatccggttggctatatgagctaaatcactaatcctgacaggcattatttgctatgtaagcatgttgtactgagacctattgtttatcaaatattaaggtgatactacataaacttcaatatttgctctaaaaggctagaaatccccatattaatcagatagagggagggaggttaaccagatagatatatggtagatggaaaggagggatctgaagtctgaagcatgttctgagcatgactcaatatgctcctttaataaaatgtcgtggctcaggtgcttcatatataatagacatggtttgctttatctgaatcccagtcaacacatgaagcttttatcttcctccttgtctcagataatcatgccgtgcactatgatagatctgaagcactacgaactgtctttgactgtgactccactttgatgccttcagctttggttgcctgcaatcctttgctgttcccacgctttcattcagtagatttcttgatacttagactgtcgttgcagtgcataattgttcagctatttgccaatacattgatctccttcaattctttgttccttttgttccaggagcggaatgttcgccgtcggttatcaatcgagcaacccacaagaactaactcatcagggctagctgaagcctgatcagttctggtcccatgtacccatcggattccaagaaagcttcaaatgctaatgtggatgaaaggaacagaatgttcgcccttcgtcatgaggtgtgggcatgaaagttcaagatggtatggacaagccaaagtgtacaaagatagcgttttttttttcattgatgtagacaggaaaggtgaccttgttagtacgactagatctcctttgaaagggaaaataaaagaaaaatagttcgattcaatctggaggtgatatgcgtatgtcatatgaatgataacagagtagttttcagatggttctttcgcggtgaccatcatgttgccccc</dnaseqindica> 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| External Link(s) |
